RNA–Protein interactions for RNA: ENST00000359972.6

APAF1-203, Transcript of apoptotic peptidase activating factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene APAF1, Length 7,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-203ENST00000359972 SUPT16HQ9Y5B9 1047 aaKnown RBP20■□□□□ 0.79
APAF1-203ENST00000359972 ZBTB7CA1YPR0 619 aa19.97■□□□□ 0.79
APAF1-203ENST00000359972 WDR43Q15061 677 aaKnown RBP eCLIP19.96■□□□□ 0.79
APAF1-203ENST00000359972 ARID3CA6NKF2 412 aa19.91■□□□□ 0.78
APAF1-203ENST00000359972 MSNP26038 577 aaKnown RBP19.91■□□□□ 0.78
APAF1-203ENST00000359972 MYH16Q9H6N6 1097 aa19.91■□□□□ 0.78
APAF1-203ENST00000359972 ZRSR1Q15695 479 aaKnown RBP19.88■□□□□ 0.77
APAF1-203ENST00000359972 P3H3Q8IVL6 736 aa19.88■□□□□ 0.77
APAF1-203ENST00000359972 RBM19Q9Y4C8 960 aaKnown RBP19.84■□□□□ 0.77
APAF1-203ENST00000359972 L1TD1Q5T7N2 865 aaKnown RBP19.83■□□□□ 0.77
APAF1-203ENST00000359972 TNNT3P45378 269 aaPredicted RBP19.83■□□□□ 0.76
APAF1-203ENST00000359972 CHAF1AQ13111 956 aaPredicted RBP19.83■□□□□ 0.76
APAF1-203ENST00000359972 ZNF777Q9ULD5 760 aaPredicted RBP19.8■□□□□ 0.76
APAF1-203ENST00000359972 PPP4R2Q9NY27 417 aa19.79■□□□□ 0.76
APAF1-203ENST00000359972 DCAF1Q9Y4B6 1507 aa19.79■□□□□ 0.76
APAF1-203ENST00000359972 RGS3P49796 1198 aa19.79■□□□□ 0.76
APAF1-203ENST00000359972 SPRYD3Q8NCJ5 442 aa19.79■□□□□ 0.76
APAF1-203ENST00000359972 B4GALNT3Q6L9W6 998 aa19.78■□□□□ 0.76
APAF1-203ENST00000359972 HSP90AB1P08238 724 aaKnown RBP19.76■□□□□ 0.75
APAF1-203ENST00000359972 VSIG10Q8N0Z9 540 aa19.76■□□□□ 0.75
APAF1-203ENST00000359972 TULP1O00294 542 aaPredicted RBP19.76■□□□□ 0.75
APAF1-203ENST00000359972 GOLGA6L6A8MZA4 724 aa19.73■□□□□ 0.75
APAF1-203ENST00000359972 PNNQ9H307 717 aaKnown RBP19.72■□□□□ 0.75
APAF1-203ENST00000359972 TAOK2Q9UL54 1235 aa19.71■□□□□ 0.75
APAF1-203ENST00000359972 CHGAP10645 457 aaKnown RBP19.69■□□□□ 0.74
APAF1-203ENST00000359972 CASC1Q6TDU7 716 aa19.68■□□□□ 0.74
APAF1-203ENST00000359972 DRC7Q8IY82 874 aa19.67■□□□□ 0.74
APAF1-203ENST00000359972 GZF1Q9H116 711 aaPredicted RBP19.66■□□□□ 0.74
APAF1-203ENST00000359972 HSP90AA2PQ14568 343 aaPredicted RBP19.66■□□□□ 0.74
APAF1-203ENST00000359972 KDM2AQ9Y2K7 1162 aa19.65■□□□□ 0.74
APAF1-203ENST00000359972 HSCBQ8IWL3 235 aa19.58■□□□□ 0.73
APAF1-203ENST00000359972 FTSJ3Q8IY81 847 aaKnown RBP19.58■□□□□ 0.72
APAF1-203ENST00000359972 CHIC2Q9UKJ5 165 aa19.58■□□□□ 0.72
APAF1-203ENST00000359972 NRDCO43847 1150 aa19.57■□□□□ 0.72
APAF1-203ENST00000359972 TSHZ2Q9NRE2 1034 aa19.57■□□□□ 0.72
APAF1-203ENST00000359972 TIMELESSQ9UNS1 1208 aa19.55■□□□□ 0.72
APAF1-203ENST00000359972 EIF4G2P78344 907 aaKnown RBP eCLIP19.53■□□□□ 0.72
APAF1-203ENST00000359972 FBLN2P98095 1184 aa19.52■□□□□ 0.72
APAF1-203ENST00000359972 A0A0U1RQG5 324 aaPredicted RBP19.51■□□□□ 0.71
APAF1-203ENST00000359972 RSPH6AQ9H0K4 717 aa19.51■□□□□ 0.71
APAF1-203ENST00000359972 FRAT1Q92837 279 aaPredicted RBP19.49■□□□□ 0.71
APAF1-203ENST00000359972 KIAA2012Q0VF49 1180 aa19.49■□□□□ 0.71
APAF1-203ENST00000359972 GOLGA6L4A6NEF3 574 aa19.47■□□□□ 0.71
APAF1-203ENST00000359972 GOLGA6L3A6NEY3 463 aa19.47■□□□□ 0.71
APAF1-203ENST00000359972 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.47■□□□□ 0.712e-12■■■■■ 39
APAF1-203ENST00000359972 SLKQ9H2G2 1235 aaPredicted RBP19.46■□□□□ 0.71
APAF1-203ENST00000359972 STAG3Q9UJ98 1225 aa19.46■□□□□ 0.71
APAF1-203ENST00000359972 NAP1L2Q9ULW6 460 aaPredicted RBP19.45■□□□□ 0.7
APAF1-203ENST00000359972 NEUROD2Q15784 382 aa19.44■□□□□ 0.7
APAF1-203ENST00000359972 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
APAF1-203ENST00000359972 SENP3Q9H4L4 574 aaPredicted RBP19.39■□□□□ 0.69
APAF1-203ENST00000359972 FGD1P98174 961 aa19.38■□□□□ 0.69
APAF1-203ENST00000359972 NOC3LQ8WTT2 800 aaKnown RBP19.37■□□□□ 0.69
APAF1-203ENST00000359972 GBP4Q96PP9 640 aa19.35■□□□□ 0.69
APAF1-203ENST00000359972 IPO9Q96P70 1041 aaKnown RBP19.35■□□□□ 0.69
APAF1-203ENST00000359972 PLEKHG5O94827 1062 aa19.35■□□□□ 0.69
APAF1-203ENST00000359972 ZNF771Q7L3S4 317 aaPredicted RBP19.34■□□□□ 0.69
APAF1-203ENST00000359972 A0A0G2JS52 829 aa19.34■□□□□ 0.69
APAF1-203ENST00000359972 GOLGA6L1Q8N7Z2 621 aa19.34■□□□□ 0.69
APAF1-203ENST00000359972 CALRP27797 417 aaKnown RBP19.33■□□□□ 0.69
APAF1-203ENST00000359972 CCDC180Q9P1Z9 1646 aa19.33■□□□□ 0.69
APAF1-203ENST00000359972 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.69
APAF1-203ENST00000359972 KCNJ4P48050 445 aa19.33■□□□□ 0.68
APAF1-203ENST00000359972 PKNOX2Q96KN3 472 aa19.32■□□□□ 0.68
APAF1-203ENST00000359972 PTMSP20962 102 aa19.31■□□□□ 0.68
APAF1-203ENST00000359972 SETQ01105 290 aaPredicted RBP19.3■□□□□ 0.68
APAF1-203ENST00000359972 PODXL2Q9NZ53 605 aa19.26■□□□□ 0.67
APAF1-203ENST00000359972 OS9Q13438 667 aaPredicted RBP19.24■□□□□ 0.67
APAF1-203ENST00000359972 KNSTRNQ9Y448 316 aa19.23■□□□□ 0.67
APAF1-203ENST00000359972 CC2D1BQ5T0F9 858 aaKnown RBP19.23■□□□□ 0.67
APAF1-203ENST00000359972 CFAP53Q96M91 514 aa19.23■□□□□ 0.67
APAF1-203ENST00000359972 FOXD4L1Q9NU39 408 aa19.23■□□□□ 0.67
APAF1-203ENST00000359972 PRKCSHP14314 528 aaPredicted RBP19.23■□□□□ 0.67
APAF1-203ENST00000359972 RRP7BPQ9NSQ0 103 aa19.22■□□□□ 0.67
APAF1-203ENST00000359972 ANO8Q9HCE9 1232 aaPredicted RBP19.22■□□□□ 0.67
APAF1-203ENST00000359972 CLSTN1O94985 981 aa19.21■□□□□ 0.67
APAF1-203ENST00000359972 ESF1Q9H501 851 aaKnown RBP19.21■□□□□ 0.67
APAF1-203ENST00000359972 MCCP23508 829 aa19.21■□□□□ 0.67
APAF1-203ENST00000359972 PATL2C9JE40 543 aaKnown RBP19.21■□□□□ 0.67
APAF1-203ENST00000359972 FAM13BQ9NYF5 915 aa19.2■□□□□ 0.66
APAF1-203ENST00000359972 GSE1Q14687 1217 aa19.19■□□□□ 0.66
APAF1-203ENST00000359972 MYO15BQ96JP2 1530 aa19.18■□□□□ 0.66
APAF1-203ENST00000359972 SYAP1Q96A49 352 aaPredicted RBP19.17■□□□□ 0.66
APAF1-203ENST00000359972 C14orf37Q86TY3 774 aa19.17■□□□□ 0.66
APAF1-203ENST00000359972 MAPK8IP3Q9UPT6 1336 aa19.17■□□□□ 0.66
APAF1-203ENST00000359972 PDE4CQ08493 712 aa19.17■□□□□ 0.66
APAF1-203ENST00000359972 TCERG1O14776 1098 aaKnown RBP19.16■□□□□ 0.66
APAF1-203ENST00000359972 APPP05067 770 aa19.16■□□□□ 0.66
APAF1-203ENST00000359972 MFAP1P55081 439 aaKnown RBP19.15■□□□□ 0.66
APAF1-203ENST00000359972 CALD1Q05682 793 aaKnown RBP19.15■□□□□ 0.66
APAF1-203ENST00000359972 RGL3Q3MIN7 710 aa19.15■□□□□ 0.66
APAF1-203ENST00000359972 SLC4A3P48751 1232 aa19.14■□□□□ 0.65
APAF1-203ENST00000359972 PABPN1Q86U42 306 aaKnown RBP eCLIP19.13■□□□□ 0.65
APAF1-203ENST00000359972 APBB1O00213 710 aa19.13■□□□□ 0.65
APAF1-203ENST00000359972 SIN3AQ96ST3 1273 aa19.13■□□□□ 0.65
APAF1-203ENST00000359972 GNL2Q13823 731 aaKnown RBP19.12■□□□□ 0.65
APAF1-203ENST00000359972 MS4A1P11836 297 aa19.11■□□□□ 0.65
APAF1-203ENST00000359972 CARD11Q9BXL7 1154 aa19.1■□□□□ 0.65
APAF1-203ENST00000359972 CHMP4BQ9H444 224 aaKnown RBP19.1■□□□□ 0.65
APAF1-203ENST00000359972 FOXD4L5Q5VV16 416 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 1478.2 ms