RNA–Protein interactions for RNA: ENST00000359008.8

VTCN1-202, Transcript of V-set domain containing T cell activation inhibitor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VTCN1, Length 2,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTCN1-202ENST00000359008 SPRYD3Q8NCJ5 442 aa10.21□□□□□ -0.77
VTCN1-202ENST00000359008 ARID3AQ99856 593 aa10.21□□□□□ -0.77
VTCN1-202ENST00000359008 BICRAQ9NZM4 1560 aa10.21□□□□□ -0.77
VTCN1-202ENST00000359008 HMGB1P09429 215 aaKnown RBP10.21□□□□□ -0.78
VTCN1-202ENST00000359008 HSP90B1P14625 803 aaKnown RBP10.21□□□□□ -0.78
VTCN1-202ENST00000359008 MIER1Q8N108 512 aa10.21□□□□□ -0.78
VTCN1-202ENST00000359008 ZBTB7CA1YPR0 619 aa10.2□□□□□ -0.78
VTCN1-202ENST00000359008 ZNF316A6NFI3 1004 aaPredicted RBP10.18□□□□□ -0.78
VTCN1-202ENST00000359008 BRPF1P55201 1214 aaPredicted RBP10.18□□□□□ -0.78
VTCN1-202ENST00000359008 UBE2Q2Q8WVN8 375 aa10.17□□□□□ -0.78
VTCN1-202ENST00000359008 NECTIN2Q92692 538 aa10.17□□□□□ -0.78
VTCN1-202ENST00000359008 DHX37Q8IY37 1157 aaKnown RBP10.13□□□□□ -0.79
VTCN1-202ENST00000359008 MROH2BQ7Z745 1585 aa10.13□□□□□ -0.79
VTCN1-202ENST00000359008 IFNLR1Q8IU57 520 aaPredicted RBP10.12□□□□□ -0.79
VTCN1-202ENST00000359008 BRD2P25440 801 aaKnown RBP10.09□□□□□ -0.79
VTCN1-202ENST00000359008 PUS7Q96PZ0 661 aaKnown RBP10.09□□□□□ -0.79
VTCN1-202ENST00000359008 C1orf115Q9H7X2 142 aa10.08□□□□□ -0.8
VTCN1-202ENST00000359008 BAZ1AQ9NRL2 1556 aaPredicted RBP10.07□□□□□ -0.8
VTCN1-202ENST00000359008 ATXN8OSP0DMR3 200 aa10.07□□□□□ -0.8
VTCN1-202ENST00000359008 VASPP50552 380 aaPredicted RBP10.07□□□□□ -0.8
VTCN1-202ENST00000359008 HNRNPUL2Q1KMD3 747 aaKnown RBP10.07□□□□□ -0.8
VTCN1-202ENST00000359008 ZMYND15Q9H091 742 aa10.07□□□□□ -0.8
VTCN1-202ENST00000359008 RSPH6AQ9H0K4 717 aa10.07□□□□□ -0.8
VTCN1-202ENST00000359008 BCL11AQ9H165 835 aa10.04□□□□□ -0.8
VTCN1-202ENST00000359008 SUPT16HQ9Y5B9 1047 aaKnown RBP10.03□□□□□ -0.8
VTCN1-202ENST00000359008 CEP162Q5TB80 1403 aa10.02□□□□□ -0.81
VTCN1-202ENST00000359008 SMARCA4P51532 1647 aa10.02□□□□□ -0.81
VTCN1-202ENST00000359008 WIZO95785 1651 aa10.01□□□□□ -0.81
VTCN1-202ENST00000359008 DNAJC5BQ9UF47 199 aa10□□□□□ -0.81
VTCN1-202ENST00000359008 ABCC8Q09428 1581 aa9.98□□□□□ -0.81
VTCN1-202ENST00000359008 PDE4CQ08493 712 aa9.98□□□□□ -0.81
VTCN1-202ENST00000359008 ANP32EQ9BTT0 268 aa9.96□□□□□ -0.81
VTCN1-202ENST00000359008 NEUROD2Q15784 382 aa9.96□□□□□ -0.82
VTCN1-202ENST00000359008 CCDC88BA6NC98 1476 aa9.96□□□□□ -0.82
VTCN1-202ENST00000359008 WRNQ14191 1432 aaPredicted RBP eCLIP9.95□□□□□ -0.82
VTCN1-202ENST00000359008 KCTD17Q8N5Z5 321 aa9.95□□□□□ -0.82
VTCN1-202ENST00000359008 SOGA1O94964 1423 aa9.94□□□□□ -0.82
VTCN1-202ENST00000359008 ATAD2BQ9ULI0 1458 aa9.93□□□□□ -0.82
VTCN1-202ENST00000359008 RAD21O60216 631 aa9.93□□□□□ -0.82
VTCN1-202ENST00000359008 EIF4G1Q04637 1599 aaKnown RBP9.93□□□□□ -0.82
VTCN1-202ENST00000359008 ECM2O94769 699 aaPredicted RBP9.93□□□□□ -0.82
VTCN1-202ENST00000359008 TAF7LQ5H9L4 462 aa9.92□□□□□ -0.82
VTCN1-202ENST00000359008 FOXD1Q16676 465 aa9.91□□□□□ -0.82
VTCN1-202ENST00000359008 ZNF428Q96B54 188 aa9.91□□□□□ -0.82
VTCN1-202ENST00000359008 ARID3CA6NKF2 412 aa9.91□□□□□ -0.82
VTCN1-202ENST00000359008 RUSC2Q8N2Y8 1516 aa9.91□□□□□ -0.82
VTCN1-202ENST00000359008 PEG3Q9GZU2 1588 aa9.9□□□□□ -0.82
VTCN1-202ENST00000359008 RGS22Q8NE09 1264 aa9.9□□□□□ -0.82
VTCN1-202ENST00000359008 POLR3GLQ9BT43 218 aa9.9□□□□□ -0.82
VTCN1-202ENST00000359008 RGL2O15211 777 aa9.88□□□□□ -0.83
VTCN1-202ENST00000359008 KCNH8Q96L42 1107 aa9.88□□□□□ -0.83
VTCN1-202ENST00000359008 MTMR7Q9Y216 660 aa9.87□□□□□ -0.83
VTCN1-202ENST00000359008 BAZ1BQ9UIG0 1483 aaKnown RBP9.87□□□□□ -0.83
VTCN1-202ENST00000359008 TOP2AP11388 1531 aaKnown RBP9.87□□□□□ -0.83
VTCN1-202ENST00000359008 SMARCA2P51531 1590 aa9.87□□□□□ -0.83
VTCN1-202ENST00000359008 TNIKQ9UKE5 1360 aa9.86□□□□□ -0.83
VTCN1-202ENST00000359008 NCAPD3P42695 1498 aa9.85□□□□□ -0.83
VTCN1-202ENST00000359008 SLC4A2P04920 1241 aa9.84□□□□□ -0.83
VTCN1-202ENST00000359008 RBM25P49756 843 aaKnown RBP9.84□□□□□ -0.83
VTCN1-202ENST00000359008 LMOD2Q6P5Q4 547 aa9.83□□□□□ -0.84
VTCN1-202ENST00000359008 APBB1O00213 710 aa9.83□□□□□ -0.84
VTCN1-202ENST00000359008 FOXD4L5Q5VV16 416 aaPredicted RBP9.81□□□□□ -0.84
VTCN1-202ENST00000359008 FOXD4L4Q8WXT5 416 aaPredicted RBP9.81□□□□□ -0.84
VTCN1-202ENST00000359008 CHGAP10645 457 aaKnown RBP9.8□□□□□ -0.84
VTCN1-202ENST00000359008 CC2D2AQ9P2K1 1620 aa9.8□□□□□ -0.84
VTCN1-202ENST00000359008 ITGAEP38570 1179 aa9.79□□□□□ -0.84
VTCN1-202ENST00000359008 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.79□□□□□ -0.84
VTCN1-202ENST00000359008 NEFLP07196 543 aa9.78□□□□□ -0.84
VTCN1-202ENST00000359008 MYCNP04198 464 aaPredicted RBP9.78□□□□□ -0.84
VTCN1-202ENST00000359008 CLSPNQ9HAW4 1339 aa9.77□□□□□ -0.85
VTCN1-202ENST00000359008 GOLGA3Q08378 1498 aa9.77□□□□□ -0.85
VTCN1-202ENST00000359008 HMGXB3Q12766 1538 aa9.74□□□□□ -0.85
VTCN1-202ENST00000359008 RBM19Q9Y4C8 960 aaKnown RBP9.74□□□□□ -0.85
VTCN1-202ENST00000359008 DHX57Q6P158 1386 aaKnown RBP9.74□□□□□ -0.85
VTCN1-202ENST00000359008 CLIP1P30622 1438 aa9.74□□□□□ -0.85
VTCN1-202ENST00000359008 MAPK8IP2Q13387 824 aaPredicted RBP9.72□□□□□ -0.85
VTCN1-202ENST00000359008 SLC24A3Q9HC58 644 aa9.72□□□□□ -0.85
VTCN1-202ENST00000359008 USP35Q9P2H5 1018 aa9.72□□□□□ -0.85
VTCN1-202ENST00000359008 ZNF692Q9BU19 519 aaPredicted RBP9.71□□□□□ -0.85
VTCN1-202ENST00000359008 AEBP1Q8IUX7 1158 aa9.7□□□□□ -0.86
VTCN1-202ENST00000359008 TMCO4Q5TGY1 634 aa9.7□□□□□ -0.86
VTCN1-202ENST00000359008 FAM177A1Q8N128 213 aaPredicted RBP9.7□□□□□ -0.86
VTCN1-202ENST00000359008 MFAP1P55081 439 aaKnown RBP9.69□□□□□ -0.86
VTCN1-202ENST00000359008 TRIM52Q96A61 297 aa9.69□□□□□ -0.86
VTCN1-202ENST00000359008 MSH5O43196 834 aa9.69□□□□□ -0.86
VTCN1-202ENST00000359008 BCCIPQ9P287 314 aaKnown RBP eCLIP9.69□□□□□ -0.86
VTCN1-202ENST00000359008 VPS8Q8N3P4 1428 aa9.69□□□□□ -0.86
VTCN1-202ENST00000359008 BCL11BQ9C0K0 894 aaPredicted RBP9.69□□□□□ -0.86
VTCN1-202ENST00000359008 CCDC82Q8N4S0 544 aa9.68□□□□□ -0.86
VTCN1-202ENST00000359008 HIRIP3Q9BW71 556 aaPredicted RBP9.68□□□□□ -0.86
VTCN1-202ENST00000359008 DDX10Q13206 875 aaKnown RBP9.67□□□□□ -0.86
VTCN1-202ENST00000359008 EEA1Q15075 1411 aa9.67□□□□□ -0.86
VTCN1-202ENST00000359008 PROM2Q8N271 834 aa9.66□□□□□ -0.86
VTCN1-202ENST00000359008 PIAS4Q8N2W9 510 aaPredicted RBP9.66□□□□□ -0.86
VTCN1-202ENST00000359008 TRAIPQ9BWF2 469 aa9.65□□□□□ -0.86
VTCN1-202ENST00000359008 KANK4Q5T7N3 995 aaPredicted RBP9.65□□□□□ -0.87
VTCN1-202ENST00000359008 ZC3H15Q8WU90 426 aaKnown RBP9.65□□□□□ -0.87
VTCN1-202ENST00000359008 CEP164Q9UPV0 1460 aa9.64□□□□□ -0.87
VTCN1-202ENST00000359008 RAPGEF2Q9Y4G8 1499 aa9.64□□□□□ -0.87
VTCN1-202ENST00000359008 E9PSI1 815 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms