RNA–Protein interactions for RNA: ENST00000358813.4

CCL20-201, Transcript of C-C motif chemokine ligand 20, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCL20, Length 800 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20-201ENST00000358813 CIZ1Q9ULV3 898 aaPredicted RBP12.02□□□□□ -0.49
CCL20-201ENST00000358813 GSE1Q14687 1217 aa12.01□□□□□ -0.49
CCL20-201ENST00000358813 ZRANB1Q9UGI0 708 aa12.01□□□□□ -0.49
CCL20-201ENST00000358813 EVX2Q03828 476 aa11.95□□□□□ -0.5
CCL20-201ENST00000358813 CCDC61Q9Y6R9 512 aa11.92□□□□□ -0.5
CCL20-201ENST00000358813 PYGBP11216 843 aa11.88□□□□□ -0.51
CCL20-201ENST00000358813 ZNF579Q8NAF0 562 aaKnown RBP11.88□□□□□ -0.51
CCL20-201ENST00000358813 PHF12Q96QT6 1004 aa11.88□□□□□ -0.51
CCL20-201ENST00000358813 NISCHQ9Y2I1 1504 aa11.87□□□□□ -0.51
CCL20-201ENST00000358813 PKD2Q13563 968 aa11.86□□□□□ -0.51
CCL20-201ENST00000358813 TRIM41Q8WV44 630 aa11.86□□□□□ -0.51
CCL20-201ENST00000358813 ECM2O94769 699 aaPredicted RBP11.84□□□□□ -0.51
CCL20-201ENST00000358813 CHRM1P11229 460 aaPredicted RBP11.81□□□□□ -0.52
CCL20-201ENST00000358813 KIF12Q96FN5 646 aa11.81□□□□□ -0.52
CCL20-201ENST00000358813 MAP3K13O43283 966 aa11.79□□□□□ -0.52
CCL20-201ENST00000358813 SP7Q8TDD2 431 aaPredicted RBP11.79□□□□□ -0.52
CCL20-201ENST00000358813 CLCN6P51797 869 aa11.77□□□□□ -0.53
CCL20-201ENST00000358813 PCDHB13Q9Y5F0 798 aa11.77□□□□□ -0.53
CCL20-201ENST00000358813 GABBR2O75899 941 aa11.74□□□□□ -0.53
CCL20-201ENST00000358813 PLCB2Q00722 1185 aa11.74□□□□□ -0.53
CCL20-201ENST00000358813 SGIP1Q9BQI5 828 aa11.74□□□□□ -0.53
CCL20-201ENST00000358813 MS4A3Q96HJ5 214 aa11.73□□□□□ -0.53
CCL20-201ENST00000358813 GALR2O43603 387 aaPredicted RBP11.71□□□□□ -0.53
CCL20-201ENST00000358813 ZNF467Q7Z7K2 595 aaPredicted RBP11.71□□□□□ -0.53
CCL20-201ENST00000358813 IFNL1Q8IU54 200 aa11.71□□□□□ -0.53
CCL20-201ENST00000358813 RGL2O15211 777 aa11.7□□□□□ -0.54
CCL20-201ENST00000358813 PCDHB8Q9UN66 801 aa11.7□□□□□ -0.54
CCL20-201ENST00000358813 RIOK3O14730 519 aaKnown RBP11.68□□□□□ -0.54
CCL20-201ENST00000358813 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
CCL20-201ENST00000358813 DCAF8L2P0C7V8 631 aa11.64□□□□□ -0.55
CCL20-201ENST00000358813 TAOK2Q9UL54 1235 aa11.63□□□□□ -0.55
CCL20-201ENST00000358813 VGFO15240 615 aaPredicted RBP11.61□□□□□ -0.55
CCL20-201ENST00000358813 TRPC6Q9Y210 931 aa11.61□□□□□ -0.55
CCL20-201ENST00000358813 HAP1P54257 671 aaPredicted RBP11.6□□□□□ -0.55
CCL20-201ENST00000358813 PDAP1Q13442 181 aaKnown RBP11.6□□□□□ -0.55
CCL20-201ENST00000358813 PSEN1P49768 467 aa11.59□□□□□ -0.55
CCL20-201ENST00000358813 DCBLD2Q96PD2 775 aa11.59□□□□□ -0.55
CCL20-201ENST00000358813 TIE1P35590 1138 aa11.57□□□□□ -0.56
CCL20-201ENST00000358813 BCANQ96GW7 911 aa11.56□□□□□ -0.56
CCL20-201ENST00000358813 TMEM106CQ9BVX2 250 aa11.56□□□□□ -0.56
CCL20-201ENST00000358813 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.55□□□□□ -0.56
CCL20-201ENST00000358813 ZFP91Q96JP5 570 aaPredicted RBP11.55□□□□□ -0.56
CCL20-201ENST00000358813 BMP2KQ9NSY1 1161 aaPredicted RBP11.54□□□□□ -0.56
CCL20-201ENST00000358813 TTLL13PA6NNM8 815 aa11.52□□□□□ -0.57
CCL20-201ENST00000358813 STK25O00506 426 aa11.51□□□□□ -0.57
CCL20-201ENST00000358813 ATMINO43313 823 aaPredicted RBP11.5□□□□□ -0.57
CCL20-201ENST00000358813 ASTLQ6HA08 431 aaPredicted RBP11.5□□□□□ -0.57
CCL20-201ENST00000358813 CHGAP10645 457 aaKnown RBP11.49□□□□□ -0.57
CCL20-201ENST00000358813 BCL11BQ9C0K0 894 aaPredicted RBP11.49□□□□□ -0.57
CCL20-201ENST00000358813 ATN1P54259 1190 aaPredicted RBP11.48□□□□□ -0.57
CCL20-201ENST00000358813 STK24Q9Y6E0 443 aa11.48□□□□□ -0.57
CCL20-201ENST00000358813 GOLGA2Q08379 1002 aa11.47□□□□□ -0.57
CCL20-201ENST00000358813 VSIG10Q8N0Z9 540 aa11.47□□□□□ -0.57
CCL20-201ENST00000358813 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
CCL20-201ENST00000358813 TRIM35Q9UPQ4 493 aa11.46□□□□□ -0.57
CCL20-201ENST00000358813 CABP2Q9NPB3 220 aa11.45□□□□□ -0.58
CCL20-201ENST00000358813 HS6ST3Q8IZP7 471 aa11.44□□□□□ -0.58
CCL20-201ENST00000358813 PELP1Q8IZL8 1130 aaKnown RBP11.41□□□□□ -0.58
CCL20-201ENST00000358813 MKRN3Q13064 507 aaKnown RBP11.4□□□□□ -0.58
CCL20-201ENST00000358813 EFCAB3Q8N7B9 438 aa11.38□□□□□ -0.59
CCL20-201ENST00000358813 PRKCSHP14314 528 aaPredicted RBP11.36□□□□□ -0.59
CCL20-201ENST00000358813 SLC39A7Q92504 469 aa11.36□□□□□ -0.59
CCL20-201ENST00000358813 IER5LQ5T953 404 aa11.35□□□□□ -0.59
CCL20-201ENST00000358813 C7P10643 843 aa11.34□□□□□ -0.59
CCL20-201ENST00000358813 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.33□□□□□ -0.6
CCL20-201ENST00000358813 METRNQ9UJH8 293 aa11.33□□□□□ -0.6
CCL20-201ENST00000358813 SOX12O15370 315 aa11.32□□□□□ -0.6
CCL20-201ENST00000358813 SEC24BO95487 1268 aa11.31□□□□□ -0.6
CCL20-201ENST00000358813 BBXQ8WY36 941 aaPredicted RBP11.31□□□□□ -0.6
CCL20-201ENST00000358813 DNAJC5Q9H3Z4 198 aa11.31□□□□□ -0.6
CCL20-201ENST00000358813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCL20-201ENST00000358813 PLCG2P16885 1265 aa11.28□□□□□ -0.6
CCL20-201ENST00000358813 IRX5P78411 483 aaPredicted RBP11.28□□□□□ -0.6
CCL20-201ENST00000358813 PHF8Q9UPP1 1060 aa11.28□□□□□ -0.6
CCL20-201ENST00000358813 NKX1-1Q15270 411 aaPredicted RBP11.27□□□□□ -0.61
CCL20-201ENST00000358813 OCEL1Q9H607 264 aa11.27□□□□□ -0.61
CCL20-201ENST00000358813 NLRP6P59044 892 aa11.26□□□□□ -0.61
CCL20-201ENST00000358813 MFRPQ9BY79 579 aa11.26□□□□□ -0.61
CCL20-201ENST00000358813 COLQQ9Y215 455 aaPredicted RBP11.25□□□□□ -0.61
CCL20-201ENST00000358813 POTEFA5A3E0 1075 aa11.22□□□□□ -0.61
CCL20-201ENST00000358813 RYDENQ9NUL5 291 aaKnown RBP11.22□□□□□ -0.61
CCL20-201ENST00000358813 ILDR1Q86SU0 546 aaPredicted RBP11.21□□□□□ -0.61
CCL20-201ENST00000358813 PDCD7Q8N8D1 485 aaKnown RBP11.21□□□□□ -0.61
CCL20-201ENST00000358813 FBXO22Q8NEZ5 403 aa11.21□□□□□ -0.61
CCL20-201ENST00000358813 TPRNQ4KMQ1 711 aa11.2□□□□□ -0.62
CCL20-201ENST00000358813 PAXIP1Q6ZW49 1069 aaPredicted RBP11.19□□□□□ -0.62
CCL20-201ENST00000358813 MS4A4AQ96JQ5 239 aa11.19□□□□□ -0.62
CCL20-201ENST00000358813 KDM2AQ9Y2K7 1162 aa11.19□□□□□ -0.62
CCL20-201ENST00000358813 DPY19L2Q6NUT2 758 aa11.18□□□□□ -0.62
CCL20-201ENST00000358813 GTPBP6O43824 516 aaPredicted RBP11.17□□□□□ -0.62
CCL20-201ENST00000358813 SPRYD3Q8NCJ5 442 aa11.17□□□□□ -0.62
CCL20-201ENST00000358813 CFAP44Q96MT7 982 aa11.16□□□□□ -0.62
CCL20-201ENST00000358813 G3V3G9 751 aa11.14□□□□□ -0.63
CCL20-201ENST00000358813 L3MBTL3Q96JM7 780 aaPredicted RBP11.13□□□□□ -0.63
CCL20-201ENST00000358813 POTEB2H3BUK9 544 aa11.11□□□□□ -0.63
CCL20-201ENST00000358813 PPP1R37O75864 691 aa11.11□□□□□ -0.63
CCL20-201ENST00000358813 BOLA1Q9Y3E2 137 aa11.1□□□□□ -0.63
CCL20-201ENST00000358813 LHX8Q68G74 356 aa11.08□□□□□ -0.64
CCL20-201ENST00000358813 ABCC9O60706 1549 aa11.08□□□□□ -0.64
CCL20-201ENST00000358813 POTEJP0CG39 1038 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms