RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 CCDC9Q9Y3X0 531 aaKnown RBP7.78□□□□□ -1.16
BRCA1-203ENST00000357654 PHF23Q9BUL5 403 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-203ENST00000357654 PPM1GO15355 546 aaPredicted RBP7.78□□□□□ -1.16
BRCA1-203ENST00000357654 FKBP8Q14318 412 aa7.77□□□□□ -1.17
BRCA1-203ENST00000357654 NCLP19338 710 aaKnown RBP7.77□□□□□ -1.17
BRCA1-203ENST00000357654 HRCP23327 699 aa7.76□□□□□ -1.17
BRCA1-203ENST00000357654 TRIM44Q96DX7 344 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-203ENST00000357654 KLHL34Q8N239 644 aa7.75□□□□□ -1.17
BRCA1-203ENST00000357654 LOC105371045A0A1W2PR82 267 aa7.74□□□□□ -1.17
BRCA1-203ENST00000357654 WWC1Q8IX03 1113 aa7.74□□□□□ -1.17
BRCA1-203ENST00000357654 CNKSR2Q8WXI2 1034 aa7.74□□□□□ -1.17
BRCA1-203ENST00000357654 LAS1LQ9Y4W2 734 aaKnown RBP7.73□□□□□ -1.17
BRCA1-203ENST00000357654 KDM2AQ9Y2K7 1162 aa7.73□□□□□ -1.17
BRCA1-203ENST00000357654 ZNF330Q9Y3S2 320 aaPredicted RBP7.72□□□□□ -1.17
BRCA1-203ENST00000357654 PLCB2Q00722 1185 aa7.72□□□□□ -1.17
BRCA1-203ENST00000357654 TMX4Q9H1E5 349 aaPredicted RBP7.71□□□□□ -1.17
BRCA1-203ENST00000357654 FAM9BQ8IZU0 186 aa7.71□□□□□ -1.18
BRCA1-203ENST00000357654 TMC1Q8TDI8 760 aa7.71□□□□□ -1.18
BRCA1-203ENST00000357654 WDR43Q15061 677 aaKnown RBP eCLIP7.71□□□□□ -1.18
BRCA1-203ENST00000357654 G3V3G9 751 aa7.71□□□□□ -1.18
BRCA1-203ENST00000357654 SOX12O15370 315 aa7.71□□□□□ -1.18
BRCA1-203ENST00000357654 DCAF8Q5TAQ9 597 aa7.71□□□□□ -1.18
BRCA1-203ENST00000357654 ERICH6BQ5W0A0 696 aa7.69□□□□□ -1.18
BRCA1-203ENST00000357654 FGD1P98174 961 aa7.69□□□□□ -1.18
BRCA1-203ENST00000357654 OS9Q13438 667 aaPredicted RBP7.69□□□□□ -1.18
BRCA1-203ENST00000357654 SENP3-EIF4A1A0A087X0R7 540 aa7.69□□□□□ -1.18
BRCA1-203ENST00000357654 PTMAP06454 111 aaKnown RBP7.69□□□□□ -1.18
BRCA1-203ENST00000357654 DNTTIP2Q5QJE6 756 aaKnown RBP7.68□□□□□ -1.18
BRCA1-203ENST00000357654 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.68□□□□□ -1.18
BRCA1-203ENST00000357654 DCAF8L1A6NGE4 600 aa7.68□□□□□ -1.18
BRCA1-203ENST00000357654 MSH5O43196 834 aa7.68□□□□□ -1.18
BRCA1-203ENST00000357654 DCAF1Q9Y4B6 1507 aa7.68□□□□□ -1.18
BRCA1-203ENST00000357654 KCNH8Q96L42 1107 aa7.67□□□□□ -1.18
BRCA1-203ENST00000357654 GLIPR1L2Q4G1C9 344 aa7.66□□□□□ -1.18
BRCA1-203ENST00000357654 NOC3LQ8WTT2 800 aaKnown RBP7.66□□□□□ -1.18
BRCA1-203ENST00000357654 MLECQ14165 292 aa7.65□□□□□ -1.18
BRCA1-203ENST00000357654 VPS53Q5VIR6 699 aa7.65□□□□□ -1.19
BRCA1-203ENST00000357654 CHIC2Q9UKJ5 165 aa7.64□□□□□ -1.19
BRCA1-203ENST00000357654 KCNJ4P48050 445 aa7.63□□□□□ -1.19
BRCA1-203ENST00000357654 CWC22Q9HCG8 908 aaKnown RBP7.62□□□□□ -1.19
BRCA1-203ENST00000357654 PNNQ9H307 717 aaKnown RBP7.61□□□□□ -1.19
BRCA1-203ENST00000357654 MYO15BQ96JP2 1530 aa7.61□□□□□ -1.19
BRCA1-203ENST00000357654 CASC1Q6TDU7 716 aa7.6□□□□□ -1.19
BRCA1-203ENST00000357654 GNL2Q13823 731 aaKnown RBP7.6□□□□□ -1.19
BRCA1-203ENST00000357654 MEX3CQ5U5Q3 659 aaKnown RBP7.6□□□□□ -1.19
BRCA1-203ENST00000357654 ZCCHC6Q5VYS8 1495 aaKnown RBP7.6□□□□□ -1.19
BRCA1-203ENST00000357654 NEUROD2Q15784 382 aa7.59□□□□□ -1.19
BRCA1-203ENST00000357654 CSB-PGBD3P0DP91 1061 aa7.59□□□□□ -1.19
BRCA1-203ENST00000357654 TNNT2P45379 298 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-203ENST00000357654 A0A0U1RQG5 324 aaPredicted RBP7.59□□□□□ -1.2
BRCA1-203ENST00000357654 KIAA2012Q0VF49 1180 aa7.59□□□□□ -1.2
BRCA1-203ENST00000357654 GTF3C3Q9Y5Q9 886 aa7.58□□□□□ -1.2
BRCA1-203ENST00000357654 RAD21O60216 631 aa7.58□□□□□ -1.2
BRCA1-203ENST00000357654 HNRNPUQ00839 825 aaKnown RBP eCLIP7.58□□□□□ -1.2
BRCA1-203ENST00000357654 VSIG10Q8N0Z9 540 aa7.58□□□□□ -1.2
BRCA1-203ENST00000357654 IRX6P78412 446 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-203ENST00000357654 WDR70Q9NW82 654 aa7.57□□□□□ -1.2
BRCA1-203ENST00000357654 CREBRFQ8IUR6 639 aa7.57□□□□□ -1.2
BRCA1-203ENST00000357654 GOLGA6L6A8MZA4 724 aa7.57□□□□□ -1.2
BRCA1-203ENST00000357654 PAK3O75914 559 aaPredicted RBP7.57□□□□□ -1.2
BRCA1-203ENST00000357654 CCDC136Q96JN2 1154 aa7.56□□□□□ -1.2
BRCA1-203ENST00000357654 EIF4G2P78344 907 aaKnown RBP eCLIP7.56□□□□□ -1.2
BRCA1-203ENST00000357654 GOLGA6L22H0YM25 854 aa7.55□□□□□ -1.2
BRCA1-203ENST00000357654 POGKQ9P215 609 aa7.55□□□□□ -1.2
BRCA1-203ENST00000357654 SAMD1Q6SPF0 538 aaPredicted RBP7.54□□□□□ -1.2
BRCA1-203ENST00000357654 FBXW7Q969H0 707 aa7.54□□□□□ -1.2
BRCA1-203ENST00000357654 FTSJ3Q8IY81 847 aaKnown RBP7.54□□□□□ -1.2
BRCA1-203ENST00000357654 RGL3Q3MIN7 710 aa7.54□□□□□ -1.2
BRCA1-203ENST00000357654 CHMP3Q9Y3E7 222 aa7.53□□□□□ -1.2
BRCA1-203ENST00000357654 DRC7Q8IY82 874 aa7.53□□□□□ -1.2
BRCA1-203ENST00000357654 ANP32EQ9BTT0 268 aa7.53□□□□□ -1.2
BRCA1-203ENST00000357654 PPP1R1BQ9UD71 204 aaPredicted RBP7.53□□□□□ -1.2
BRCA1-203ENST00000357654 CTDP1Q9Y5B0 961 aaPredicted RBP7.52□□□□□ -1.21
BRCA1-203ENST00000357654 PATL2C9JE40 543 aaKnown RBP7.51□□□□□ -1.21
BRCA1-203ENST00000357654 GOLGA6L4A6NEF3 574 aa7.51□□□□□ -1.21
BRCA1-203ENST00000357654 FRAT2O75474 233 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-203ENST00000357654 MARCH6O60337 910 aa7.51□□□□□ -1.21
BRCA1-203ENST00000357654 RASSF8Q8NHQ8 419 aa7.51□□□□□ -1.21
BRCA1-203ENST00000357654 CHAF1AQ13111 956 aaPredicted RBP7.51□□□□□ -1.21
BRCA1-203ENST00000357654 APBB1O00213 710 aa7.5□□□□□ -1.21
BRCA1-203ENST00000357654 HSP90B1P14625 803 aaKnown RBP7.5□□□□□ -1.21
BRCA1-203ENST00000357654 CHMP7Q8WUX9 453 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-203ENST00000357654 PPM1FP49593 454 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-203ENST00000357654 TCEAL9Q9UHQ7 104 aa7.5□□□□□ -1.21
BRCA1-203ENST00000357654 GTF2E1P29083 439 aaPredicted RBP7.5□□□□□ -1.21
BRCA1-203ENST00000357654 TONSLQ96HA7 1378 aa7.49□□□□□ -1.21
BRCA1-203ENST00000357654 U2SURPO15042 1029 aaKnown RBP7.49□□□□□ -1.21
BRCA1-203ENST00000357654 SAFB2Q14151 953 aaKnown RBP eCLIP7.49□□□□□ -1.211e-6■□□□□ 10.7
BRCA1-203ENST00000357654 CEP89Q96ST8 783 aa7.49□□□□□ -1.21
BRCA1-203ENST00000357654 MAPK8IP3Q9UPT6 1336 aa7.49□□□□□ -1.21
BRCA1-203ENST00000357654 ARID3AQ99856 593 aa7.49□□□□□ -1.21
BRCA1-203ENST00000357654 TSPY4P0CV99 314 aa7.49□□□□□ -1.21
BRCA1-203ENST00000357654 TSPY10P0CW01 314 aa7.49□□□□□ -1.21
BRCA1-203ENST00000357654 TAF7LQ5H9L4 462 aa7.49□□□□□ -1.21
BRCA1-203ENST00000357654 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.48□□□□□ -1.214e-6■■■■■ 85.3
BRCA1-203ENST00000357654 HIRIP3Q9BW71 556 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-203ENST00000357654 ABCC9O60706 1549 aa7.48□□□□□ -1.21
BRCA1-203ENST00000357654 BECN1Q14457 450 aa7.48□□□□□ -1.21
BRCA1-203ENST00000357654 CFAP53Q96M91 514 aa7.48□□□□□ -1.21
BRCA1-203ENST00000357654 FRAT1Q92837 279 aaPredicted RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms