RNA–Protein interactions for RNA: ENST00000356763.7

PIK3R4-201, Transcript of phosphoinositide-3-kinase regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PIK3R4, Length 5,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3R4-201ENST00000356763 CECR2Q9BXF3 1484 aa15.22■□□□□ 0.03
PIK3R4-201ENST00000356763 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
PIK3R4-201ENST00000356763 FAM9BQ8IZU0 186 aa15.22■□□□□ 0.03
PIK3R4-201ENST00000356763 HAP1P54257 671 aaPredicted RBP15.19■□□□□ 0.02
PIK3R4-201ENST00000356763 NPM2Q86SE8 214 aaKnown RBP15.19■□□□□ 0.02
PIK3R4-201ENST00000356763 MYO15BQ96JP2 1530 aa15.19■□□□□ 0.02
PIK3R4-201ENST00000356763 WDR43Q15061 677 aaKnown RBP eCLIP15.18■□□□□ 0.02
PIK3R4-201ENST00000356763 HNRNPUQ00839 825 aaKnown RBP eCLIP15.17■□□□□ 0.02
PIK3R4-201ENST00000356763 CEP162Q5TB80 1403 aa15.16■□□□□ 0.02
PIK3R4-201ENST00000356763 MYT1Q01538 1121 aa15.15■□□□□ 0.02
PIK3R4-201ENST00000356763 GTF3C3Q9Y5Q9 886 aa15.14■□□□□ 0.01
PIK3R4-201ENST00000356763 CUX2O14529 1486 aa15.13■□□□□ 0.01
PIK3R4-201ENST00000356763 PDS5BQ9NTI5 1447 aa15.13■□□□□ 0.01
PIK3R4-201ENST00000356763 CARMIL1Q5VZK9 1371 aa15.13■□□□□ 0.01
PIK3R4-201ENST00000356763 EIF4G2P78344 907 aaKnown RBP eCLIP15.13■□□□□ 0.01
PIK3R4-201ENST00000356763 MLECQ14165 292 aa15.13■□□□□ 0.01
PIK3R4-201ENST00000356763 CEP164Q9UPV0 1460 aa15.13■□□□□ 0.01
PIK3R4-201ENST00000356763 ACIN1Q9UKV3 1341 aaKnown RBP15.12■□□□□ 0.01
PIK3R4-201ENST00000356763 HIRIP3Q9BW71 556 aaPredicted RBP15.11■□□□□ 0.01
PIK3R4-201ENST00000356763 MRS2Q9HD23 443 aa15.09■□□□□ 0.01
PIK3R4-201ENST00000356763 EIF4G1Q04637 1599 aaKnown RBP15.08■□□□□ 0.01
PIK3R4-201ENST00000356763 LMOD2Q6P5Q4 547 aa15.08■□□□□ 0
PIK3R4-201ENST00000356763 CCNB3Q8WWL7 1395 aa15.08■□□□□ 0
PIK3R4-201ENST00000356763 TNIKQ9UKE5 1360 aa15.07■□□□□ 0
PIK3R4-201ENST00000356763 POGKQ9P215 609 aa15.05■□□□□ 0
PIK3R4-201ENST00000356763 TDRD9Q8NDG6 1382 aaKnown RBP15.05■□□□□ -0
PIK3R4-201ENST00000356763 CDCA8Q53HL2 280 aa15.03■□□□□ -0
PIK3R4-201ENST00000356763 PPM1GO15355 546 aaPredicted RBP15.02■□□□□ -0
PIK3R4-201ENST00000356763 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.02■□□□□ -0
PIK3R4-201ENST00000356763 FHAD1B1AJZ9 1412 aa15.01□□□□□ -0.01
PIK3R4-201ENST00000356763 CARD11Q9BXL7 1154 aa15.01□□□□□ -0.01
PIK3R4-201ENST00000356763 SOGA1O94964 1423 aa15□□□□□ -0.01
PIK3R4-201ENST00000356763 CARMIL2Q6F5E8 1435 aa15□□□□□ -0.01
PIK3R4-201ENST00000356763 SMARCA2P51531 1590 aa15□□□□□ -0.01
PIK3R4-201ENST00000356763 GGT6Q6P531 493 aa15□□□□□ -0.01
PIK3R4-201ENST00000356763 CFAP53Q96M91 514 aa14.98□□□□□ -0.01
PIK3R4-201ENST00000356763 HSP90AA1P07900 732 aaKnown RBP14.98□□□□□ -0.01
PIK3R4-201ENST00000356763 KNSTRNQ9Y448 316 aa14.98□□□□□ -0.01
PIK3R4-201ENST00000356763 HDGFP51858 240 aaKnown RBP14.97□□□□□ -0.01
PIK3R4-201ENST00000356763 KANK1Q14678 1352 aa14.96□□□□□ -0.01
PIK3R4-201ENST00000356763 ANP32AP39687 249 aaKnown RBP14.96□□□□□ -0.01
PIK3R4-201ENST00000356763 FKBP8Q14318 412 aa14.96□□□□□ -0.01
PIK3R4-201ENST00000356763 MROH2BQ7Z745 1585 aa14.96□□□□□ -0.01
PIK3R4-201ENST00000356763 ARXQ96QS3 562 aa14.96□□□□□ -0.01
PIK3R4-201ENST00000356763 UPF2Q9HAU5 1272 aaKnown RBP14.96□□□□□ -0.01
PIK3R4-201ENST00000356763 CCDC88BA6NC98 1476 aa14.94□□□□□ -0.02
PIK3R4-201ENST00000356763 CADPSQ9ULU8 1353 aa14.92□□□□□ -0.02
PIK3R4-201ENST00000356763 EFCAB2Q5VUJ9 269 aa14.92□□□□□ -0.02
PIK3R4-201ENST00000356763 MYH16Q9H6N6 1097 aa14.91□□□□□ -0.02
PIK3R4-201ENST00000356763 CCDC136Q96JN2 1154 aa14.9□□□□□ -0.02
PIK3R4-201ENST00000356763 DCAF11Q8TEB1 546 aa14.88□□□□□ -0.03
PIK3R4-201ENST00000356763 SIN3AQ96ST3 1273 aa14.87□□□□□ -0.03
PIK3R4-201ENST00000356763 NUDCQ9Y266 331 aa14.86□□□□□ -0.03
PIK3R4-201ENST00000356763 TNNT2P45379 298 aaPredicted RBP14.85□□□□□ -0.03
PIK3R4-201ENST00000356763 SAFB2Q14151 953 aaKnown RBP eCLIP14.84□□□□□ -0.03
PIK3R4-201ENST00000356763 NEUROD2Q15784 382 aa14.84□□□□□ -0.03
PIK3R4-201ENST00000356763 JPH4Q96JJ6 628 aa14.84□□□□□ -0.03
PIK3R4-201ENST00000356763 MAPK8IP3Q9UPT6 1336 aa14.84□□□□□ -0.03
PIK3R4-201ENST00000356763 SRPK2P78362 688 aaKnown RBP14.83□□□□□ -0.04
PIK3R4-201ENST00000356763 SOX12O15370 315 aa14.82□□□□□ -0.04
PIK3R4-201ENST00000356763 SENP3-EIF4A1A0A087X0R7 540 aa14.82□□□□□ -0.04
PIK3R4-201ENST00000356763 CYB5RLQ6IPT4 315 aa14.81□□□□□ -0.04
PIK3R4-201ENST00000356763 STK26Q9P289 416 aa14.8□□□□□ -0.04
PIK3R4-201ENST00000356763 LAS1LQ9Y4W2 734 aaKnown RBP14.8□□□□□ -0.04
PIK3R4-201ENST00000356763 NPHP1O15259 732 aa14.8□□□□□ -0.04
PIK3R4-201ENST00000356763 ABCC8Q09428 1581 aa14.79□□□□□ -0.04
PIK3R4-201ENST00000356763 MIER1Q8N108 512 aa14.79□□□□□ -0.04
PIK3R4-201ENST00000356763 KIF3BO15066 747 aa14.78□□□□□ -0.04
PIK3R4-201ENST00000356763 PKD2Q13563 968 aa14.78□□□□□ -0.04
PIK3R4-201ENST00000356763 U2SURPO15042 1029 aaKnown RBP14.78□□□□□ -0.04
PIK3R4-201ENST00000356763 TMF1P82094 1093 aa14.78□□□□□ -0.04
PIK3R4-201ENST00000356763 FMN1Q68DA7 1419 aa14.77□□□□□ -0.04
PIK3R4-201ENST00000356763 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
PIK3R4-201ENST00000356763 ATAD2BQ9ULI0 1458 aa14.77□□□□□ -0.05
PIK3R4-201ENST00000356763 IRX6P78412 446 aaPredicted RBP14.75□□□□□ -0.05
PIK3R4-201ENST00000356763 CC2D1BQ5T0F9 858 aaKnown RBP14.74□□□□□ -0.05
PIK3R4-201ENST00000356763 ARHGAP35Q9NRY4 1499 aa14.74□□□□□ -0.05
PIK3R4-201ENST00000356763 KANK4Q5T7N3 995 aaPredicted RBP14.73□□□□□ -0.05
PIK3R4-201ENST00000356763 SPAG9O60271 1321 aaKnown RBP14.73□□□□□ -0.05
PIK3R4-201ENST00000356763 HNRNPMP52272 730 aaKnown RBP eCLIP14.72□□□□□ -0.05
PIK3R4-201ENST00000356763 VPS8Q8N3P4 1428 aa14.72□□□□□ -0.05
PIK3R4-201ENST00000356763 NUP155O75694 1391 aa14.71□□□□□ -0.05
PIK3R4-201ENST00000356763 ANP32BQ92688 251 aaKnown RBP14.71□□□□□ -0.06
PIK3R4-201ENST00000356763 PAK3O75914 559 aaPredicted RBP14.7□□□□□ -0.06
PIK3R4-201ENST00000356763 FTSJ3Q8IY81 847 aaKnown RBP14.7□□□□□ -0.06
PIK3R4-201ENST00000356763 FOXD1Q16676 465 aa14.7□□□□□ -0.06
PIK3R4-201ENST00000356763 TOP2AP11388 1531 aaKnown RBP14.7□□□□□ -0.06
PIK3R4-201ENST00000356763 WASHC2CQ9Y4E1 1318 aa14.7□□□□□ -0.06
PIK3R4-201ENST00000356763 ANKRD30AQ9BXX3 1397 aa14.7□□□□□ -0.06
PIK3R4-201ENST00000356763 EID1Q9Y6B2 187 aa14.69□□□□□ -0.06
PIK3R4-201ENST00000356763 FANCD2Q9BXW9 1451 aa14.68□□□□□ -0.06
PIK3R4-201ENST00000356763 PNNQ9H307 717 aaKnown RBP14.68□□□□□ -0.06
PIK3R4-201ENST00000356763 RSPH4AQ5TD94 716 aa14.67□□□□□ -0.06
PIK3R4-201ENST00000356763 RAPGEF2Q9Y4G8 1499 aa14.67□□□□□ -0.06
PIK3R4-201ENST00000356763 MORC1Q86VD1 984 aa14.67□□□□□ -0.06
PIK3R4-201ENST00000356763 WIZO95785 1651 aa14.67□□□□□ -0.06
PIK3R4-201ENST00000356763 HDGFL2Q7Z4V5 671 aaPredicted RBP14.67□□□□□ -0.06
PIK3R4-201ENST00000356763 FHOD3Q2V2M9 1422 aa14.66□□□□□ -0.06
PIK3R4-201ENST00000356763 SETD5Q9C0A6 1442 aa14.65□□□□□ -0.06
PIK3R4-201ENST00000356763 PTPRGP23470 1445 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms