RNA–Protein interactions for RNA: ENST00000344157.8

YTHDC1-201, Transcript of YTH domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YTHDC1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDC1-201ENST00000344157 TPRNQ4KMQ1 711 aa16.15■□□□□ 0.18
YTHDC1-201ENST00000344157 LAS1LQ9Y4W2 734 aaKnown RBP16.15■□□□□ 0.18
YTHDC1-201ENST00000344157 PLCB2Q00722 1185 aa16.12■□□□□ 0.17
YTHDC1-201ENST00000344157 STAG3Q9UJ98 1225 aa16.06■□□□□ 0.16
YTHDC1-201ENST00000344157 NOP58Q9Y2X3 529 aaKnown RBP16.05■□□□□ 0.16
YTHDC1-201ENST00000344157 ARID4BQ4LE39 1312 aaPredicted RBP16.01■□□□□ 0.15
YTHDC1-201ENST00000344157 CHAF1AQ13111 956 aaPredicted RBP16■□□□□ 0.15
YTHDC1-201ENST00000344157 GOLGA6L6A8MZA4 724 aa15.99■□□□□ 0.15
YTHDC1-201ENST00000344157 HIRIP3Q9BW71 556 aaPredicted RBP15.99■□□□□ 0.15
YTHDC1-201ENST00000344157 TULP1O00294 542 aaPredicted RBP15.99■□□□□ 0.15
YTHDC1-201ENST00000344157 CSRNP3Q8WYN3 585 aa15.99■□□□□ 0.15
YTHDC1-201ENST00000344157 NRDCO43847 1150 aa15.99■□□□□ 0.15
YTHDC1-201ENST00000344157 DEKP35659 375 aaKnown RBP15.99■□□□□ 0.15
YTHDC1-201ENST00000344157 CASC1Q6TDU7 716 aa15.98■□□□□ 0.15
YTHDC1-201ENST00000344157 SUPT16HQ9Y5B9 1047 aaKnown RBP15.98■□□□□ 0.15
YTHDC1-201ENST00000344157 MSNP26038 577 aaKnown RBP15.96■□□□□ 0.15
YTHDC1-201ENST00000344157 KDM2AQ9Y2K7 1162 aa15.95■□□□□ 0.14
YTHDC1-201ENST00000344157 PLEKHG5O94827 1062 aa15.94■□□□□ 0.14
YTHDC1-201ENST00000344157 RGS3P49796 1198 aa15.93■□□□□ 0.14
YTHDC1-201ENST00000344157 SENP3-EIF4A1A0A087X0R7 540 aa15.93■□□□□ 0.14
YTHDC1-201ENST00000344157 L1TD1Q5T7N2 865 aaKnown RBP15.91■□□□□ 0.14
YTHDC1-201ENST00000344157 HSP90AB1P08238 724 aaKnown RBP15.91■□□□□ 0.14
YTHDC1-201ENST00000344157 PPP4R2Q9NY27 417 aa15.9■□□□□ 0.14
YTHDC1-201ENST00000344157 CHIC2Q9UKJ5 165 aa15.9■□□□□ 0.14
YTHDC1-201ENST00000344157 TNNT3P45378 269 aaPredicted RBP15.89■□□□□ 0.13
YTHDC1-201ENST00000344157 EIF4G2P78344 907 aaKnown RBP eCLIP15.89■□□□□ 0.136e-15■□□□□ 8.5
YTHDC1-201ENST00000344157 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.88■□□□□ 0.134e-7■■■□□ 14.8
YTHDC1-201ENST00000344157 FTSJ3Q8IY81 847 aaKnown RBP15.88■□□□□ 0.13
YTHDC1-201ENST00000344157 TAOK2Q9UL54 1235 aa15.88■□□□□ 0.13
YTHDC1-201ENST00000344157 ARID3AQ99856 593 aa15.87■□□□□ 0.13
YTHDC1-201ENST00000344157 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.87■□□□□ 0.13
YTHDC1-201ENST00000344157 ZBTB7CA1YPR0 619 aa15.84■□□□□ 0.13
YTHDC1-201ENST00000344157 GOLGA6L4A6NEF3 574 aa15.84■□□□□ 0.13
YTHDC1-201ENST00000344157 PNNQ9H307 717 aaKnown RBP15.82■□□□□ 0.12
YTHDC1-201ENST00000344157 DRC7Q8IY82 874 aa15.82■□□□□ 0.12
YTHDC1-201ENST00000344157 FGD1P98174 961 aa15.82■□□□□ 0.12
YTHDC1-201ENST00000344157 HSCBQ8IWL3 235 aa15.79■□□□□ 0.12
YTHDC1-201ENST00000344157 B4GALNT3Q6L9W6 998 aa15.79■□□□□ 0.12
YTHDC1-201ENST00000344157 CFAP53Q96M91 514 aa15.77■□□□□ 0.12
YTHDC1-201ENST00000344157 FRAT1Q92837 279 aaPredicted RBP15.76■□□□□ 0.11
YTHDC1-201ENST00000344157 NAP1L2Q9ULW6 460 aaPredicted RBP15.76■□□□□ 0.11
YTHDC1-201ENST00000344157 KCNJ4P48050 445 aa15.76■□□□□ 0.11
YTHDC1-201ENST00000344157 NEUROD2Q15784 382 aa15.76■□□□□ 0.11
YTHDC1-201ENST00000344157 SPRYD3Q8NCJ5 442 aa15.75■□□□□ 0.11
YTHDC1-201ENST00000344157 KIAA2012Q0VF49 1180 aa15.75■□□□□ 0.11
YTHDC1-201ENST00000344157 C14orf37Q86TY3 774 aa15.73■□□□□ 0.11
YTHDC1-201ENST00000344157 RBM19Q9Y4C8 960 aaKnown RBP15.73■□□□□ 0.11
YTHDC1-201ENST00000344157 DCAF1Q9Y4B6 1507 aa15.73■□□□□ 0.11
YTHDC1-201ENST00000344157 PABPN1Q86U42 306 aaKnown RBP eCLIP15.73■□□□□ 0.11
YTHDC1-201ENST00000344157 NPM1P06748 294 aaKnown RBP eCLIP15.73■□□□□ 0.11
YTHDC1-201ENST00000344157 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
YTHDC1-201ENST00000344157 TSPY4P0CV99 314 aa15.71■□□□□ 0.11
YTHDC1-201ENST00000344157 TSPY10P0CW01 314 aa15.71■□□□□ 0.11
YTHDC1-201ENST00000344157 KNSTRNQ9Y448 316 aa15.7■□□□□ 0.1
YTHDC1-201ENST00000344157 SENP3Q9H4L4 574 aaPredicted RBP15.7■□□□□ 0.1
YTHDC1-201ENST00000344157 HAP1P54257 671 aaPredicted RBP15.69■□□□□ 0.1
YTHDC1-201ENST00000344157 GZF1Q9H116 711 aaPredicted RBP15.69■□□□□ 0.1
YTHDC1-201ENST00000344157 CHMP4BQ9H444 224 aaKnown RBP15.68■□□□□ 0.1
YTHDC1-201ENST00000344157 OS9Q13438 667 aaPredicted RBP15.68■□□□□ 0.1
YTHDC1-201ENST00000344157 MAPK8IP3Q9UPT6 1336 aa15.66■□□□□ 0.1
YTHDC1-201ENST00000344157 MS4A1P11836 297 aa15.65■□□□□ 0.1
YTHDC1-201ENST00000344157 NOC3LQ8WTT2 800 aaKnown RBP15.65■□□□□ 0.1
YTHDC1-201ENST00000344157 CLSTN1O94985 981 aa15.64■□□□□ 0.09
YTHDC1-201ENST00000344157 GBP4Q96PP9 640 aa15.63■□□□□ 0.09
YTHDC1-201ENST00000344157 MCCP23508 829 aa15.62■□□□□ 0.09
YTHDC1-201ENST00000344157 HSP90AA2PQ14568 343 aaPredicted RBP15.62■□□□□ 0.09
YTHDC1-201ENST00000344157 CDCA8Q53HL2 280 aa15.61■□□□□ 0.09
YTHDC1-201ENST00000344157 GOLGA6L1Q8N7Z2 621 aa15.61■□□□□ 0.09
YTHDC1-201ENST00000344157 VSIG10Q8N0Z9 540 aa15.61■□□□□ 0.09
YTHDC1-201ENST00000344157 RGL3Q3MIN7 710 aa15.6■□□□□ 0.09
YTHDC1-201ENST00000344157 SLKQ9H2G2 1235 aaPredicted RBP15.6■□□□□ 0.09
YTHDC1-201ENST00000344157 NUDCQ9Y266 331 aa15.6■□□□□ 0.09
YTHDC1-201ENST00000344157 RRP7BPQ9NSQ0 103 aa15.6■□□□□ 0.09
YTHDC1-201ENST00000344157 PTMSP20962 102 aa15.59■□□□□ 0.09
YTHDC1-201ENST00000344157 GOLGA6L3A6NEY3 463 aa15.59■□□□□ 0.09
YTHDC1-201ENST00000344157 NPHP1O15259 732 aa15.57■□□□□ 0.08
YTHDC1-201ENST00000344157 PPP1R15AO75807 674 aaPredicted RBP15.57■□□□□ 0.08
YTHDC1-201ENST00000344157 MTUS2Q5JR59 1369 aa15.56■□□□□ 0.08
YTHDC1-201ENST00000344157 A0A0U1RQG5 324 aaPredicted RBP15.55■□□□□ 0.08
YTHDC1-201ENST00000344157 GNL2Q13823 731 aaKnown RBP15.55■□□□□ 0.08
YTHDC1-201ENST00000344157 CARD11Q9BXL7 1154 aa15.55■□□□□ 0.08
YTHDC1-201ENST00000344157 SYAP1Q96A49 352 aaPredicted RBP15.54■□□□□ 0.08
YTHDC1-201ENST00000344157 GOLGA2Q08379 1002 aa15.53■□□□□ 0.08
YTHDC1-201ENST00000344157 CFAP44Q96MT7 982 aa15.53■□□□□ 0.08
YTHDC1-201ENST00000344157 RSPH6AQ9H0K4 717 aa15.5■□□□□ 0.07
YTHDC1-201ENST00000344157 U2SURPO15042 1029 aaKnown RBP15.5■□□□□ 0.07
YTHDC1-201ENST00000344157 CC2D1BQ5T0F9 858 aaKnown RBP15.49■□□□□ 0.07
YTHDC1-201ENST00000344157 SETQ01105 290 aaPredicted RBP15.49■□□□□ 0.07
YTHDC1-201ENST00000344157 CALRP27797 417 aaKnown RBP15.49■□□□□ 0.07
YTHDC1-201ENST00000344157 HTATSF1O43719 755 aaKnown RBP15.48■□□□□ 0.07
YTHDC1-201ENST00000344157 TPM4P67936 248 aa15.48■□□□□ 0.07
YTHDC1-201ENST00000344157 KIAA1211Q6ZU35 1233 aa15.47■□□□□ 0.07
YTHDC1-201ENST00000344157 PDE4CQ08493 712 aa15.47■□□□□ 0.07
YTHDC1-201ENST00000344157 CALD1Q05682 793 aaKnown RBP15.46■□□□□ 0.07
YTHDC1-201ENST00000344157 ISY1Q9ULR0 285 aaKnown RBP15.46■□□□□ 0.07
YTHDC1-201ENST00000344157 APBB1O00213 710 aa15.46■□□□□ 0.07
YTHDC1-201ENST00000344157 USP35Q9P2H5 1018 aa15.46■□□□□ 0.06
YTHDC1-201ENST00000344157 TCERG1O14776 1098 aaKnown RBP15.45■□□□□ 0.06
YTHDC1-201ENST00000344157 IPO9Q96P70 1041 aaKnown RBP15.45■□□□□ 0.06
YTHDC1-201ENST00000344157 TSHZ2Q9NRE2 1034 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms