RNA–Protein interactions for RNA: ENST00000343958.8

FGD6-201, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FGD6, Length 9,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-201ENST00000343958 TSPY10P0CW01 314 aa11.72□□□□□ -0.53
FGD6-201ENST00000343958 PLPPR3Q6T4P5 718 aa11.72□□□□□ -0.53
FGD6-201ENST00000343958 NEFMP07197 916 aa11.71□□□□□ -0.53
FGD6-201ENST00000343958 CEP164Q9UPV0 1460 aa11.71□□□□□ -0.53
FGD6-201ENST00000343958 BAZ1BQ9UIG0 1483 aaKnown RBP11.71□□□□□ -0.54
FGD6-201ENST00000343958 NBR1Q14596 966 aa11.71□□□□□ -0.54
FGD6-201ENST00000343958 RGL3Q3MIN7 710 aa11.68□□□□□ -0.54
FGD6-201ENST00000343958 KCNH8Q96L42 1107 aa11.68□□□□□ -0.54
FGD6-201ENST00000343958 STAG3Q9UJ98 1225 aa11.67□□□□□ -0.54
FGD6-201ENST00000343958 KIF27Q86VH2 1401 aa11.67□□□□□ -0.54
FGD6-201ENST00000343958 KANK4Q5T7N3 995 aaPredicted RBP11.67□□□□□ -0.54
FGD6-201ENST00000343958 WDR43Q15061 677 aaKnown RBP eCLIP11.66□□□□□ -0.54
FGD6-201ENST00000343958 SUPT16HQ9Y5B9 1047 aaKnown RBP11.66□□□□□ -0.54
FGD6-201ENST00000343958 MROH2BQ7Z745 1585 aa11.65□□□□□ -0.54
FGD6-201ENST00000343958 NACADO15069 1562 aa11.65□□□□□ -0.54
FGD6-201ENST00000343958 NPM1P06748 294 aaKnown RBP eCLIP11.63□□□□□ -0.55
FGD6-201ENST00000343958 CCDC88BA6NC98 1476 aa11.62□□□□□ -0.55
FGD6-201ENST00000343958 PLEKHD1A6NEE1 506 aa11.61□□□□□ -0.55
FGD6-201ENST00000343958 ABCC8Q09428 1581 aa11.6□□□□□ -0.55
FGD6-201ENST00000343958 CFDP1Q9UEE9 299 aaPredicted RBP11.6□□□□□ -0.55
FGD6-201ENST00000343958 BAZ1AQ9NRL2 1556 aaPredicted RBP11.59□□□□□ -0.55
FGD6-201ENST00000343958 ESF1Q9H501 851 aaKnown RBP11.59□□□□□ -0.55
FGD6-201ENST00000343958 CCNB3Q8WWL7 1395 aa11.58□□□□□ -0.56
FGD6-201ENST00000343958 CARD11Q9BXL7 1154 aa11.58□□□□□ -0.56
FGD6-201ENST00000343958 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.57□□□□□ -0.56
FGD6-201ENST00000343958 CARMIL1Q5VZK9 1371 aa11.57□□□□□ -0.56
FGD6-201ENST00000343958 ARXQ96QS3 562 aa11.56□□□□□ -0.56
FGD6-201ENST00000343958 CUX2O14529 1486 aa11.55□□□□□ -0.56
FGD6-201ENST00000343958 HSPA5P11021 654 aaKnown RBP11.53□□□□□ -0.56
FGD6-201ENST00000343958 FOXD1Q16676 465 aa11.53□□□□□ -0.56
FGD6-201ENST00000343958 VPS8Q8N3P4 1428 aa11.52□□□□□ -0.57
FGD6-201ENST00000343958 UPF2Q9HAU5 1272 aaKnown RBP11.52□□□□□ -0.57
FGD6-201ENST00000343958 HSP90AA1P07900 732 aaKnown RBP11.51□□□□□ -0.57
FGD6-201ENST00000343958 CC2D1BQ5T0F9 858 aaKnown RBP11.51□□□□□ -0.57
FGD6-201ENST00000343958 ANP32EQ9BTT0 268 aa11.5□□□□□ -0.57
FGD6-201ENST00000343958 EIF5BO60841 1220 aaKnown RBP11.5□□□□□ -0.57
FGD6-201ENST00000343958 SETD5Q9C0A6 1442 aa11.49□□□□□ -0.57
FGD6-201ENST00000343958 B4GALNT3Q6L9W6 998 aa11.49□□□□□ -0.57
FGD6-201ENST00000343958 PLEKHG5O94827 1062 aa11.48□□□□□ -0.57
FGD6-201ENST00000343958 PPP4R2Q9NY27 417 aa11.48□□□□□ -0.57
FGD6-201ENST00000343958 NEUROD2Q15784 382 aa11.48□□□□□ -0.57
FGD6-201ENST00000343958 EIF4G1Q04637 1599 aaKnown RBP11.47□□□□□ -0.57
FGD6-201ENST00000343958 ZBTB7CA1YPR0 619 aa11.46□□□□□ -0.58
FGD6-201ENST00000343958 RAB3GAP2Q9H2M9 1393 aa11.46□□□□□ -0.58
FGD6-201ENST00000343958 RUSC2Q8N2Y8 1516 aa11.45□□□□□ -0.58
FGD6-201ENST00000343958 DCAF11Q8TEB1 546 aa11.45□□□□□ -0.58
FGD6-201ENST00000343958 KNSTRNQ9Y448 316 aa11.45□□□□□ -0.58
FGD6-201ENST00000343958 TNNT2P45379 298 aaPredicted RBP11.44□□□□□ -0.58
FGD6-201ENST00000343958 LAS1LQ9Y4W2 734 aaKnown RBP11.42□□□□□ -0.58
FGD6-201ENST00000343958 FHAD1B1AJZ9 1412 aa11.42□□□□□ -0.58
FGD6-201ENST00000343958 CCER2I3L3R5 266 aa11.42□□□□□ -0.58
FGD6-201ENST00000343958 TDRD9Q8NDG6 1382 aaKnown RBP11.41□□□□□ -0.58
FGD6-201ENST00000343958 PPM1GO15355 546 aaPredicted RBP11.4□□□□□ -0.58
FGD6-201ENST00000343958 PKD2Q13563 968 aa11.4□□□□□ -0.58
FGD6-201ENST00000343958 PPP1R15AO75807 674 aaPredicted RBP11.4□□□□□ -0.58
FGD6-201ENST00000343958 RGS3P49796 1198 aa11.4□□□□□ -0.59
FGD6-201ENST00000343958 TIMELESSQ9UNS1 1208 aa11.39□□□□□ -0.59
FGD6-201ENST00000343958 DDRGK1Q96HY6 314 aa11.39□□□□□ -0.59
FGD6-201ENST00000343958 ARHGAP35Q9NRY4 1499 aa11.39□□□□□ -0.59
FGD6-201ENST00000343958 MPHOSPH9Q99550 1183 aa11.38□□□□□ -0.59
FGD6-201ENST00000343958 ANP32BQ92688 251 aaKnown RBP11.38□□□□□ -0.59
FGD6-201ENST00000343958 FRAT1Q92837 279 aaPredicted RBP11.38□□□□□ -0.59
FGD6-201ENST00000343958 WIZO95785 1651 aa11.38□□□□□ -0.59
FGD6-201ENST00000343958 CFAP53Q96M91 514 aa11.37□□□□□ -0.59
FGD6-201ENST00000343958 RAPGEF2Q9Y4G8 1499 aa11.37□□□□□ -0.59
FGD6-201ENST00000343958 C14orf37Q86TY3 774 aa11.37□□□□□ -0.59
FGD6-201ENST00000343958 RBM19Q9Y4C8 960 aaKnown RBP11.36□□□□□ -0.59
FGD6-201ENST00000343958 FHOD3Q2V2M9 1422 aa11.36□□□□□ -0.59
FGD6-201ENST00000343958 TOP2AP11388 1531 aaKnown RBP11.36□□□□□ -0.59
FGD6-201ENST00000343958 CDCA8Q53HL2 280 aa11.36□□□□□ -0.59
FGD6-201ENST00000343958 DHX57Q6P158 1386 aaKnown RBP11.35□□□□□ -0.59
FGD6-201ENST00000343958 TMF1P82094 1093 aa11.35□□□□□ -0.59
FGD6-201ENST00000343958 MYH16Q9H6N6 1097 aa11.34□□□□□ -0.59
FGD6-201ENST00000343958 TSHZ2Q9NRE2 1034 aa11.34□□□□□ -0.59
FGD6-201ENST00000343958 NOP58Q9Y2X3 529 aaKnown RBP11.34□□□□□ -0.59
FGD6-201ENST00000343958 ERCC6Q03468 1493 aa11.33□□□□□ -0.6
FGD6-201ENST00000343958 L3MBTL2Q969R5 705 aa11.32□□□□□ -0.6
FGD6-201ENST00000343958 U2SURPO15042 1029 aaKnown RBP11.31□□□□□ -0.6
FGD6-201ENST00000343958 BECN1Q14457 450 aa11.31□□□□□ -0.6
FGD6-201ENST00000343958 SAFB2Q14151 953 aaKnown RBP eCLIP11.31□□□□□ -0.6
FGD6-201ENST00000343958 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
FGD6-201ENST00000343958 POGKQ9P215 609 aa11.31□□□□□ -0.6
FGD6-201ENST00000343958 FTSJ3Q8IY81 847 aaKnown RBP11.3□□□□□ -0.6
FGD6-201ENST00000343958 MAPK8IP3Q9UPT6 1336 aa11.3□□□□□ -0.6
FGD6-201ENST00000343958 TPRNQ4KMQ1 711 aa11.29□□□□□ -0.6
FGD6-201ENST00000343958 NCLP19338 710 aaKnown RBP11.28□□□□□ -0.6
FGD6-201ENST00000343958 HNRNPMP52272 730 aaKnown RBP eCLIP11.28□□□□□ -0.6
FGD6-201ENST00000343958 ARID4BQ4LE39 1312 aaPredicted RBP11.28□□□□□ -0.6
FGD6-201ENST00000343958 ATAD2BQ9ULI0 1458 aa11.27□□□□□ -0.61
FGD6-201ENST00000343958 NUDCQ9Y266 331 aa11.27□□□□□ -0.61
FGD6-201ENST00000343958 NUP155O75694 1391 aa11.26□□□□□ -0.61
FGD6-201ENST00000343958 MORC1Q86VD1 984 aa11.25□□□□□ -0.61
FGD6-201ENST00000343958 CADPSQ9ULU8 1353 aa11.25□□□□□ -0.61
FGD6-201ENST00000343958 GGT6Q6P531 493 aa11.25□□□□□ -0.61
FGD6-201ENST00000343958 SMARCA2P51531 1590 aa11.25□□□□□ -0.61
FGD6-201ENST00000343958 A0A0G2JS52 829 aa11.24□□□□□ -0.61
FGD6-201ENST00000343958 MLECQ14165 292 aa11.24□□□□□ -0.61
FGD6-201ENST00000343958 STK26Q9P289 416 aa11.24□□□□□ -0.61
FGD6-201ENST00000343958 SPRYD3Q8NCJ5 442 aa11.23□□□□□ -0.61
FGD6-201ENST00000343958 FMN1Q68DA7 1419 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms