RNA–Protein interactions for RNA: ENST00000342449.7

BRWD1-203, Transcript of bromodomain and WD repeat domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene BRWD1, Length 12,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1-203ENST00000342449 CHMP7Q8WUX9 453 aaPredicted RBP9.48□□□□□ -0.89
BRWD1-203ENST00000342449 PPP1R15AO75807 674 aaPredicted RBP9.47□□□□□ -0.89
BRWD1-203ENST00000342449 MTUS2Q5JR59 1369 aa9.46□□□□□ -0.89
BRWD1-203ENST00000342449 NCLP19338 710 aaKnown RBP9.45□□□□□ -0.9
BRWD1-203ENST00000342449 KCNH8Q96L42 1107 aa9.44□□□□□ -0.9
BRWD1-203ENST00000342449 RRP7BPQ9NSQ0 103 aa9.44□□□□□ -0.9
BRWD1-203ENST00000342449 HAP1P54257 671 aaPredicted RBP9.44□□□□□ -0.9
BRWD1-203ENST00000342449 BECN1Q14457 450 aa9.43□□□□□ -0.9
BRWD1-203ENST00000342449 EIF4G2P78344 907 aaKnown RBP eCLIP9.43□□□□□ -0.9
BRWD1-203ENST00000342449 DDRGK1Q96HY6 314 aa9.42□□□□□ -0.9
BRWD1-203ENST00000342449 TULP1O00294 542 aaPredicted RBP9.41□□□□□ -0.9
BRWD1-203ENST00000342449 RGL3Q3MIN7 710 aa9.41□□□□□ -0.9
BRWD1-203ENST00000342449 PPM1GO15355 546 aaPredicted RBP9.4□□□□□ -0.9
BRWD1-203ENST00000342449 TRIM44Q96DX7 344 aaPredicted RBP9.4□□□□□ -0.9
BRWD1-203ENST00000342449 TPRNQ4KMQ1 711 aa9.4□□□□□ -0.9
BRWD1-203ENST00000342449 MIER1Q8N108 512 aa9.4□□□□□ -0.9
BRWD1-203ENST00000342449 ARID4BQ4LE39 1312 aaPredicted RBP9.4□□□□□ -0.91
BRWD1-203ENST00000342449 SENP3-EIF4A1A0A087X0R7 540 aa9.39□□□□□ -0.91
BRWD1-203ENST00000342449 GOLGA6L22H0YM25 854 aa9.39□□□□□ -0.91
BRWD1-203ENST00000342449 DCAF1Q9Y4B6 1507 aa9.38□□□□□ -0.91
BRWD1-203ENST00000342449 CFAP53Q96M91 514 aa9.38□□□□□ -0.91
BRWD1-203ENST00000342449 CASC1Q6TDU7 716 aa9.38□□□□□ -0.91
BRWD1-203ENST00000342449 ZRSR1Q15695 479 aaKnown RBP9.37□□□□□ -0.91
BRWD1-203ENST00000342449 LAS1LQ9Y4W2 734 aaKnown RBP9.37□□□□□ -0.91
BRWD1-203ENST00000342449 FTSJ3Q8IY81 847 aaKnown RBP9.36□□□□□ -0.91
BRWD1-203ENST00000342449 PLEKHD1A6NEE1 506 aa9.36□□□□□ -0.91
BRWD1-203ENST00000342449 KNSTRNQ9Y448 316 aa9.35□□□□□ -0.91
BRWD1-203ENST00000342449 ANP32EQ9BTT0 268 aa9.35□□□□□ -0.91
BRWD1-203ENST00000342449 PTMAP06454 111 aaKnown RBP9.35□□□□□ -0.91
BRWD1-203ENST00000342449 TAOK2Q9UL54 1235 aa9.34□□□□□ -0.91
BRWD1-203ENST00000342449 CDCA8Q53HL2 280 aa9.34□□□□□ -0.91
BRWD1-203ENST00000342449 NPHP1O15259 732 aa9.33□□□□□ -0.92
BRWD1-203ENST00000342449 LMOD2Q6P5Q4 547 aa9.33□□□□□ -0.92
BRWD1-203ENST00000342449 NEUROD2Q15784 382 aa9.33□□□□□ -0.92
BRWD1-203ENST00000342449 CLIP1P30622 1438 aa9.33□□□□□ -0.92
BRWD1-203ENST00000342449 RSF1Q96T23 1441 aaPredicted RBP9.32□□□□□ -0.92
BRWD1-203ENST00000342449 DNTTIP2Q5QJE6 756 aaKnown RBP9.32□□□□□ -0.92
BRWD1-203ENST00000342449 MAPK8IP3Q9UPT6 1336 aa9.32□□□□□ -0.92
BRWD1-203ENST00000342449 CARD11Q9BXL7 1154 aa9.31□□□□□ -0.92
BRWD1-203ENST00000342449 POGKQ9P215 609 aa9.3□□□□□ -0.92
BRWD1-203ENST00000342449 ZCCHC6Q5VYS8 1495 aaKnown RBP9.29□□□□□ -0.92
BRWD1-203ENST00000342449 SUPT16HQ9Y5B9 1047 aaKnown RBP9.29□□□□□ -0.92
BRWD1-203ENST00000342449 TNNT2P45379 298 aaPredicted RBP9.29□□□□□ -0.92
BRWD1-203ENST00000342449 NUDCQ9Y266 331 aa9.29□□□□□ -0.92
BRWD1-203ENST00000342449 OS9Q13438 667 aaPredicted RBP9.29□□□□□ -0.92
BRWD1-203ENST00000342449 CFDP1Q9UEE9 299 aaPredicted RBP9.28□□□□□ -0.92
BRWD1-203ENST00000342449 FRAT1Q92837 279 aaPredicted RBP9.28□□□□□ -0.92
BRWD1-203ENST00000342449 PLCB2Q00722 1185 aa9.28□□□□□ -0.92
BRWD1-203ENST00000342449 NAP1L2Q9ULW6 460 aaPredicted RBP9.27□□□□□ -0.93
BRWD1-203ENST00000342449 FGD1P98174 961 aa9.26□□□□□ -0.93
BRWD1-203ENST00000342449 CC2D1BQ5T0F9 858 aaKnown RBP9.26□□□□□ -0.93
BRWD1-203ENST00000342449 RGS3P49796 1198 aa9.25□□□□□ -0.93
BRWD1-203ENST00000342449 GOLGA2Q08379 1002 aa9.25□□□□□ -0.93
BRWD1-203ENST00000342449 U2SURPO15042 1029 aaKnown RBP9.25□□□□□ -0.93
BRWD1-203ENST00000342449 HSP90AB1P08238 724 aaKnown RBP9.25□□□□□ -0.93
BRWD1-203ENST00000342449 KCNJ4P48050 445 aa9.25□□□□□ -0.93
BRWD1-203ENST00000342449 GOLGA3Q08378 1498 aa9.24□□□□□ -0.93
BRWD1-203ENST00000342449 GOLGA6L6A8MZA4 724 aa9.23□□□□□ -0.93
BRWD1-203ENST00000342449 PNNQ9H307 717 aaKnown RBP9.23□□□□□ -0.93
BRWD1-203ENST00000342449 CHMP4BQ9H444 224 aaKnown RBP9.23□□□□□ -0.93
BRWD1-203ENST00000342449 NAP1L5Q96NT1 182 aaPredicted RBP9.22□□□□□ -0.93
BRWD1-203ENST00000342449 CEP162Q5TB80 1403 aa9.21□□□□□ -0.94
BRWD1-203ENST00000342449 SOX12O15370 315 aa9.21□□□□□ -0.94
BRWD1-203ENST00000342449 MS4A1P11836 297 aa9.21□□□□□ -0.94
BRWD1-203ENST00000342449 PPP4R2Q9NY27 417 aa9.2□□□□□ -0.94
BRWD1-203ENST00000342449 SIN3AQ96ST3 1273 aa9.19□□□□□ -0.94
BRWD1-203ENST00000342449 NCBP3Q53F19 620 aaKnown RBP9.19□□□□□ -0.94
BRWD1-203ENST00000342449 ERICH6BQ5W0A0 696 aa9.18□□□□□ -0.94
BRWD1-203ENST00000342449 CLSTN1O94985 981 aa9.18□□□□□ -0.94
BRWD1-203ENST00000342449 TMF1P82094 1093 aa9.18□□□□□ -0.94
BRWD1-203ENST00000342449 GOLGA6L4A6NEF3 574 aa9.18□□□□□ -0.94
BRWD1-203ENST00000342449 RTN4Q9NQC3 1192 aaKnown RBP9.18□□□□□ -0.94
BRWD1-203ENST00000342449 MLECQ14165 292 aa9.17□□□□□ -0.94
BRWD1-203ENST00000342449 SRPK2P78362 688 aaKnown RBP9.17□□□□□ -0.94
BRWD1-203ENST00000342449 NRDCO43847 1150 aa9.17□□□□□ -0.94
BRWD1-203ENST00000342449 DCAF11Q8TEB1 546 aa9.17□□□□□ -0.94
BRWD1-203ENST00000342449 NOP58Q9Y2X3 529 aaKnown RBP9.17□□□□□ -0.94
BRWD1-203ENST00000342449 HSCBQ8IWL3 235 aa9.17□□□□□ -0.94
BRWD1-203ENST00000342449 TRHP20396 242 aaPredicted RBP9.17□□□□□ -0.94
BRWD1-203ENST00000342449 ISY1Q9ULR0 285 aaKnown RBP9.17□□□□□ -0.94
BRWD1-203ENST00000342449 EEA1Q15075 1411 aa9.16□□□□□ -0.94
BRWD1-203ENST00000342449 B4GALNT3Q6L9W6 998 aa9.16□□□□□ -0.94
BRWD1-203ENST00000342449 MCCP23508 829 aa9.16□□□□□ -0.94
BRWD1-203ENST00000342449 SPRYD3Q8NCJ5 442 aa9.16□□□□□ -0.94
BRWD1-203ENST00000342449 KIF27Q86VH2 1401 aa9.16□□□□□ -0.94
BRWD1-203ENST00000342449 ERCC6Q03468 1493 aa9.16□□□□□ -0.94
BRWD1-203ENST00000342449 KANK1Q14678 1352 aa9.15□□□□□ -0.94
BRWD1-203ENST00000342449 HDGFP51858 240 aaKnown RBP9.15□□□□□ -0.94
BRWD1-203ENST00000342449 SAFB2Q14151 953 aaKnown RBP eCLIP9.15□□□□□ -0.94
BRWD1-203ENST00000342449 RTF1Q92541 710 aaKnown RBP9.15□□□□□ -0.95
BRWD1-203ENST00000342449 RB1CC1Q8TDY2 1594 aa9.14□□□□□ -0.95
BRWD1-203ENST00000342449 MORC1Q86VD1 984 aa9.14□□□□□ -0.95
BRWD1-203ENST00000342449 CCNB3Q8WWL7 1395 aa9.14□□□□□ -0.95
BRWD1-203ENST00000342449 WRNQ14191 1432 aaPredicted RBP eCLIP9.14□□□□□ -0.958e-8■■■■■ 32.8
BRWD1-203ENST00000342449 DRC7Q8IY82 874 aa9.13□□□□□ -0.95
BRWD1-203ENST00000342449 BAZ1BQ9UIG0 1483 aaKnown RBP9.13□□□□□ -0.95
BRWD1-203ENST00000342449 CHAF1AQ13111 956 aaPredicted RBP9.12□□□□□ -0.95
BRWD1-203ENST00000342449 EIF4G1Q04637 1599 aaKnown RBP9.12□□□□□ -0.95
BRWD1-203ENST00000342449 GNL2Q13823 731 aaKnown RBP9.12□□□□□ -0.95
BRWD1-203ENST00000342449 STK26Q9P289 416 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms