RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 RRP7BPQ9NSQ0 103 aa15.18■□□□□ 0.02
TNC-201ENST00000341037 PPP1R15AO75807 674 aaPredicted RBP15.18■□□□□ 0.02
TNC-201ENST00000341037 MYH16Q9H6N6 1097 aa15.17■□□□□ 0.02
TNC-201ENST00000341037 SENP3-EIF4A1A0A087X0R7 540 aa15.14■□□□□ 0.01
TNC-201ENST00000341037 ARID4BQ4LE39 1312 aaPredicted RBP15.1■□□□□ 0.01
TNC-201ENST00000341037 DCAF1Q9Y4B6 1507 aa15.1■□□□□ 0.01
TNC-201ENST00000341037 RGL3Q3MIN7 710 aa15.09■□□□□ 0.01
TNC-201ENST00000341037 HAP1P54257 671 aaPredicted RBP15.09■□□□□ 0.01
TNC-201ENST00000341037 PPM1GO15355 546 aaPredicted RBP15.05■□□□□ 0
TNC-201ENST00000341037 CDK11BP21127 795 aaKnown RBP15.05■□□□□ 0
TNC-201ENST00000341037 EIF4G2P78344 907 aaKnown RBP eCLIP15.05■□□□□ 0
TNC-201ENST00000341037 CLIP1P30622 1438 aa15.05■□□□□ 0
TNC-201ENST00000341037 MIER1Q8N108 512 aa15.05■□□□□ 0
TNC-201ENST00000341037 ZCCHC6Q5VYS8 1495 aaKnown RBP15.04■□□□□ -0
TNC-201ENST00000341037 TPRNQ4KMQ1 711 aa15.03■□□□□ -0
TNC-201ENST00000341037 PLEKHD1A6NEE1 506 aa15□□□□□ -0.01
TNC-201ENST00000341037 LAS1LQ9Y4W2 734 aaKnown RBP15□□□□□ -0.01
TNC-201ENST00000341037 TULP1O00294 542 aaPredicted RBP14.99□□□□□ -0.01
TNC-201ENST00000341037 RSF1Q96T23 1441 aaPredicted RBP14.96□□□□□ -0.01
TNC-201ENST00000341037 NCLP19338 710 aaKnown RBP14.96□□□□□ -0.01
TNC-201ENST00000341037 CFAP53Q96M91 514 aa14.95□□□□□ -0.02
TNC-201ENST00000341037 LMOD2Q6P5Q4 547 aa14.95□□□□□ -0.02
TNC-201ENST00000341037 NEUROD2Q15784 382 aa14.94□□□□□ -0.02
TNC-201ENST00000341037 TAOK2Q9UL54 1235 aa14.94□□□□□ -0.02
TNC-201ENST00000341037 BECN1Q14457 450 aa14.94□□□□□ -0.02
TNC-201ENST00000341037 KNSTRNQ9Y448 316 aa14.94□□□□□ -0.02
TNC-201ENST00000341037 FTSJ3Q8IY81 847 aaKnown RBP14.92□□□□□ -0.02
TNC-201ENST00000341037 GOLGA3Q08378 1498 aa14.92□□□□□ -0.02
TNC-201ENST00000341037 TNNT2P45379 298 aaPredicted RBP14.92□□□□□ -0.02
TNC-201ENST00000341037 DDRGK1Q96HY6 314 aa14.91□□□□□ -0.02
TNC-201ENST00000341037 CFDP1Q9UEE9 299 aaPredicted RBP14.91□□□□□ -0.02
TNC-201ENST00000341037 GLIPR1L2Q4G1C9 344 aa14.91□□□□□ -0.02
TNC-201ENST00000341037 CARD11Q9BXL7 1154 aa14.91□□□□□ -0.02
TNC-201ENST00000341037 RB1CC1Q8TDY2 1594 aa14.9□□□□□ -0.02
TNC-201ENST00000341037 CASC1Q6TDU7 716 aa14.89□□□□□ -0.03
TNC-201ENST00000341037 CEP162Q5TB80 1403 aa14.89□□□□□ -0.03
TNC-201ENST00000341037 POGKQ9P215 609 aa14.88□□□□□ -0.03
TNC-201ENST00000341037 NPHP1O15259 732 aa14.88□□□□□ -0.03
TNC-201ENST00000341037 MAPK8IP3Q9UPT6 1336 aa14.87□□□□□ -0.03
TNC-201ENST00000341037 CCDC180Q9P1Z9 1646 aa14.86□□□□□ -0.03
TNC-201ENST00000341037 CC2D1BQ5T0F9 858 aaKnown RBP14.86□□□□□ -0.03
TNC-201ENST00000341037 TRIM44Q96DX7 344 aaPredicted RBP14.86□□□□□ -0.03
TNC-201ENST00000341037 ERCC6Q03468 1493 aa14.86□□□□□ -0.03
TNC-201ENST00000341037 GOLGA6L22H0YM25 854 aa14.86□□□□□ -0.03
TNC-201ENST00000341037 CDCA8Q53HL2 280 aa14.85□□□□□ -0.03
TNC-201ENST00000341037 ZRSR1Q15695 479 aaKnown RBP14.84□□□□□ -0.03
TNC-201ENST00000341037 MYO15BQ96JP2 1530 aa14.83□□□□□ -0.04
TNC-201ENST00000341037 SUPT16HQ9Y5B9 1047 aaKnown RBP14.83□□□□□ -0.04
TNC-201ENST00000341037 FRAT1Q92837 279 aaPredicted RBP14.83□□□□□ -0.04
TNC-201ENST00000341037 BAZ1BQ9UIG0 1483 aaKnown RBP14.83□□□□□ -0.04
TNC-201ENST00000341037 PTMAP06454 111 aaKnown RBP14.82□□□□□ -0.04
TNC-201ENST00000341037 EIF4G1Q04637 1599 aaKnown RBP14.81□□□□□ -0.04
TNC-201ENST00000341037 OS9Q13438 667 aaPredicted RBP14.81□□□□□ -0.04
TNC-201ENST00000341037 U2SURPO15042 1029 aaKnown RBP14.8□□□□□ -0.04
TNC-201ENST00000341037 SOX12O15370 315 aa14.79□□□□□ -0.04
TNC-201ENST00000341037 SIN3AQ96ST3 1273 aa14.79□□□□□ -0.04
TNC-201ENST00000341037 NUDCQ9Y266 331 aa14.79□□□□□ -0.04
TNC-201ENST00000341037 MLECQ14165 292 aa14.79□□□□□ -0.04
TNC-201ENST00000341037 WRNQ14191 1432 aaPredicted RBP eCLIP14.79□□□□□ -0.04
TNC-201ENST00000341037 RGS3P49796 1198 aa14.78□□□□□ -0.04
TNC-201ENST00000341037 NAP1L2Q9ULW6 460 aaPredicted RBP14.77□□□□□ -0.05
TNC-201ENST00000341037 KIF27Q86VH2 1401 aa14.77□□□□□ -0.05
TNC-201ENST00000341037 TRHP20396 242 aaPredicted RBP14.75□□□□□ -0.05
TNC-201ENST00000341037 DNTTIP2Q5QJE6 756 aaKnown RBP14.75□□□□□ -0.05
TNC-201ENST00000341037 PLCB2Q00722 1185 aa14.73□□□□□ -0.05
TNC-201ENST00000341037 SAFB2Q14151 953 aaKnown RBP eCLIP14.73□□□□□ -0.05
TNC-201ENST00000341037 EEA1Q15075 1411 aa14.73□□□□□ -0.05
TNC-201ENST00000341037 GOLGA2Q08379 1002 aa14.72□□□□□ -0.05
TNC-201ENST00000341037 FGD1P98174 961 aa14.71□□□□□ -0.05
TNC-201ENST00000341037 HSP90AB1P08238 724 aaKnown RBP14.71□□□□□ -0.05
TNC-201ENST00000341037 ANP32EQ9BTT0 268 aa14.71□□□□□ -0.05
TNC-201ENST00000341037 CCNB3Q8WWL7 1395 aa14.71□□□□□ -0.05
TNC-201ENST00000341037 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.06
TNC-201ENST00000341037 DCAF11Q8TEB1 546 aa14.7□□□□□ -0.06
TNC-201ENST00000341037 KCNJ4P48050 445 aa14.7□□□□□ -0.06
TNC-201ENST00000341037 SRPK2P78362 688 aaKnown RBP14.69□□□□□ -0.06
TNC-201ENST00000341037 KANK1Q14678 1352 aa14.68□□□□□ -0.06
TNC-201ENST00000341037 TMF1P82094 1093 aa14.66□□□□□ -0.06
TNC-201ENST00000341037 PNNQ9H307 717 aaKnown RBP14.65□□□□□ -0.06
TNC-201ENST00000341037 STK26Q9P289 416 aa14.65□□□□□ -0.06
TNC-201ENST00000341037 TNIKQ9UKE5 1360 aa14.64□□□□□ -0.07
TNC-201ENST00000341037 SPRYD3Q8NCJ5 442 aa14.64□□□□□ -0.07
TNC-201ENST00000341037 PPP4R2Q9NY27 417 aa14.63□□□□□ -0.07
TNC-201ENST00000341037 CLSTN1O94985 981 aa14.63□□□□□ -0.07
TNC-201ENST00000341037 RTN4Q9NQC3 1192 aaKnown RBP14.62□□□□□ -0.07
TNC-201ENST00000341037 B4GALNT3Q6L9W6 998 aa14.62□□□□□ -0.07
TNC-201ENST00000341037 MORC1Q86VD1 984 aa14.62□□□□□ -0.07
TNC-201ENST00000341037 ISY1Q9ULR0 285 aaKnown RBP14.62□□□□□ -0.07
TNC-201ENST00000341037 NAP1L5Q96NT1 182 aaPredicted RBP14.61□□□□□ -0.07
TNC-201ENST00000341037 CHMP4BQ9H444 224 aaKnown RBP14.61□□□□□ -0.07
TNC-201ENST00000341037 NCBP3Q53F19 620 aaKnown RBP14.6□□□□□ -0.07
TNC-201ENST00000341037 GOLGA6L6A8MZA4 724 aa14.6□□□□□ -0.07
TNC-201ENST00000341037 MS4A1P11836 297 aa14.6□□□□□ -0.07
TNC-201ENST00000341037 PAK3O75914 559 aaPredicted RBP14.59□□□□□ -0.07
TNC-201ENST00000341037 GGT6Q6P531 493 aa14.59□□□□□ -0.07
TNC-201ENST00000341037 APBB1O00213 710 aa14.59□□□□□ -0.07
TNC-201ENST00000341037 NACADO15069 1562 aa14.58□□□□□ -0.07
TNC-201ENST00000341037 RTF1Q92541 710 aaKnown RBP14.58□□□□□ -0.07
TNC-201ENST00000341037 NOP58Q9Y2X3 529 aaKnown RBP14.58□□□□□ -0.08
TNC-201ENST00000341037 HDGFP51858 240 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms