RNA–Protein interactions for RNA: ENST00000340612.4

CCDC30-201, Transcript of coiled-coil domain containing 30, humanhuman

APPRIS P2 TSL 5 BASIC

Gene CCDC30, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-201ENST00000340612 CDAN1Q8IWY9 1227 aa5.51□□□□□ -1.53
CCDC30-201ENST00000340612 MS4A3Q96HJ5 214 aa5.51□□□□□ -1.53
CCDC30-201ENST00000340612 C7P10643 843 aa5.51□□□□□ -1.53
CCDC30-201ENST00000340612 SLC39A7Q92504 469 aa5.51□□□□□ -1.53
CCDC30-201ENST00000340612 MAMSTRQ6ZN01 415 aa5.5□□□□□ -1.53
CCDC30-201ENST00000340612 PAK3O75914 559 aaPredicted RBP5.49□□□□□ -1.53
CCDC30-201ENST00000340612 POTEFA5A3E0 1075 aa5.48□□□□□ -1.53
CCDC30-201ENST00000340612 SCUBE2Q9NQ36 999 aa5.48□□□□□ -1.53
CCDC30-201ENST00000340612 ATN1P54259 1190 aaPredicted RBP5.47□□□□□ -1.53
CCDC30-201ENST00000340612 MNX1P50219 401 aaPredicted RBP5.44□□□□□ -1.54
CCDC30-201ENST00000340612 MMRN1Q13201 1228 aa5.42□□□□□ -1.54
CCDC30-201ENST00000340612 TRPC6Q9Y210 931 aa5.41□□□□□ -1.54
CCDC30-201ENST00000340612 COLQQ9Y215 455 aaPredicted RBP5.4□□□□□ -1.54
CCDC30-201ENST00000340612 SPNS2Q8IVW8 549 aa5.4□□□□□ -1.55
CCDC30-201ENST00000340612 ST18O60284 1047 aa5.39□□□□□ -1.55
CCDC30-201ENST00000340612 BMP2KQ9NSY1 1161 aaPredicted RBP5.39□□□□□ -1.55
CCDC30-201ENST00000340612 STAG3Q9UJ98 1225 aa5.39□□□□□ -1.55
CCDC30-201ENST00000340612 NPM1P06748 294 aaKnown RBP eCLIP5.38□□□□□ -1.55
CCDC30-201ENST00000340612 TSPYL2Q9H2G4 693 aaPredicted RBP5.37□□□□□ -1.55
CCDC30-201ENST00000340612 FKBP8Q14318 412 aa5.35□□□□□ -1.55
CCDC30-201ENST00000340612 CCDC61Q9Y6R9 512 aa5.34□□□□□ -1.55
CCDC30-201ENST00000340612 KIF12Q96FN5 646 aa5.34□□□□□ -1.55
CCDC30-201ENST00000340612 SLAIN1Q8ND83 568 aa5.32□□□□□ -1.56
CCDC30-201ENST00000340612 SEC24BO95487 1268 aa5.32□□□□□ -1.56
CCDC30-201ENST00000340612 MAP3K13O43283 966 aa5.3□□□□□ -1.56
CCDC30-201ENST00000340612 TTLL13PA6NNM8 815 aa5.3□□□□□ -1.56
CCDC30-201ENST00000340612 MARVELD3Q96A59 401 aa5.3□□□□□ -1.56
CCDC30-201ENST00000340612 TIE1P35590 1138 aa5.28□□□□□ -1.56
CCDC30-201ENST00000340612 SPDYE4A6NLX3 237 aa5.27□□□□□ -1.57
CCDC30-201ENST00000340612 TRIM35Q9UPQ4 493 aa5.27□□□□□ -1.57
CCDC30-201ENST00000340612 RTN4Q9NQC3 1192 aaKnown RBP5.24□□□□□ -1.57
CCDC30-201ENST00000340612 KRTAP3-3Q9BYR6 98 aa5.22□□□□□ -1.57
CCDC30-201ENST00000340612 KRTAP3-2Q9BYR7 98 aa5.22□□□□□ -1.57
CCDC30-201ENST00000340612 POTEB3A0JP26 581 aa5.21□□□□□ -1.57
CCDC30-201ENST00000340612 POTEBQ6S5H4 581 aa5.21□□□□□ -1.57
CCDC30-201ENST00000340612 RASEFQ8IZ41 740 aa5.21□□□□□ -1.57
CCDC30-201ENST00000340612 TMEM121BQ9BXQ6 578 aaPredicted RBP5.21□□□□□ -1.57
CCDC30-201ENST00000340612 IER5LQ5T953 404 aa5.21□□□□□ -1.58
CCDC30-201ENST00000340612 PLCG2P16885 1265 aa5.17□□□□□ -1.58
CCDC30-201ENST00000340612 PCDHB13Q9Y5F0 798 aa5.17□□□□□ -1.58
CCDC30-201ENST00000340612 IRX5P78411 483 aaPredicted RBP5.16□□□□□ -1.58
CCDC30-201ENST00000340612 AMER1Q5JTC6 1135 aaPredicted RBP5.16□□□□□ -1.58
CCDC30-201ENST00000340612 EMP3P54852 163 aa5.16□□□□□ -1.58
CCDC30-201ENST00000340612 IFNL1Q8IU54 200 aa5.15□□□□□ -1.58
CCDC30-201ENST00000340612 HS3ST6Q96QI5 342 aa5.15□□□□□ -1.58
CCDC30-201ENST00000340612 TMEM106CQ9BVX2 250 aa5.15□□□□□ -1.58
CCDC30-201ENST00000340612 FAM205CA6NFA0 338 aa5.15□□□□□ -1.59
CCDC30-201ENST00000340612 SNPHO15079 494 aa5.13□□□□□ -1.59
CCDC30-201ENST00000340612 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.12□□□□□ -1.59
CCDC30-201ENST00000340612 OCEL1Q9H607 264 aa5.1□□□□□ -1.59
CCDC30-201ENST00000340612 SGIP1Q9BQI5 828 aa5.1□□□□□ -1.59
CCDC30-201ENST00000340612 MIER1Q8N108 512 aa5.08□□□□□ -1.6
CCDC30-201ENST00000340612 RNF166Q96A37 237 aaPredicted RBP5.06□□□□□ -1.6
CCDC30-201ENST00000340612 PROM2Q8N271 834 aa5.06□□□□□ -1.6
CCDC30-201ENST00000340612 NUBP1P53384 320 aa5.04□□□□□ -1.6
CCDC30-201ENST00000340612 PDCD7Q8N8D1 485 aaKnown RBP5.03□□□□□ -1.6
CCDC30-201ENST00000340612 C3orf67Q6ZVT6 689 aa5.03□□□□□ -1.6
CCDC30-201ENST00000340612 SLC24A1O60721 1099 aa5.02□□□□□ -1.61
CCDC30-201ENST00000340612 PLEKHG5O94827 1062 aa5.01□□□□□ -1.61
CCDC30-201ENST00000340612 FBXO3Q9UK99 471 aa5.01□□□□□ -1.61
CCDC30-201ENST00000340612 PCDHB8Q9UN66 801 aa5□□□□□ -1.61
CCDC30-201ENST00000340612 MYT1LQ9UL68 1186 aa5□□□□□ -1.61
CCDC30-201ENST00000340612 VASPP50552 380 aaPredicted RBP5□□□□□ -1.61
CCDC30-201ENST00000340612 HOXB3P14651 431 aaPredicted RBP4.99□□□□□ -1.61
CCDC30-201ENST00000340612 PYGBP11216 843 aa4.99□□□□□ -1.61
CCDC30-201ENST00000340612 PLCD3Q8N3E9 789 aa4.98□□□□□ -1.61
CCDC30-201ENST00000340612 IFNLR1Q8IU57 520 aaPredicted RBP4.97□□□□□ -1.61
CCDC30-201ENST00000340612 ERBB3P21860 1342 aa4.97□□□□□ -1.61
CCDC30-201ENST00000340612 FAM212AQ96EL1 285 aa4.96□□□□□ -1.62
CCDC30-201ENST00000340612 DPY19L2Q6NUT2 758 aa4.95□□□□□ -1.62
CCDC30-201ENST00000340612 L3MBTL3Q96JM7 780 aaPredicted RBP4.95□□□□□ -1.62
CCDC30-201ENST00000340612 HOXB1P14653 301 aaPredicted RBP4.95□□□□□ -1.62
CCDC30-201ENST00000340612 VARS2Q5ST30 1063 aaKnown RBP4.95□□□□□ -1.62
CCDC30-201ENST00000340612 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.93□□□□□ -1.62
CCDC30-201ENST00000340612 MKRN3Q13064 507 aaKnown RBP4.92□□□□□ -1.62
CCDC30-201ENST00000340612 ZNF710Q8N1W2 664 aa4.92□□□□□ -1.62
CCDC30-201ENST00000340612 DCAF8Q5TAQ9 597 aa4.9□□□□□ -1.62
CCDC30-201ENST00000340612 DNAJC5Q9H3Z4 198 aa4.9□□□□□ -1.62
CCDC30-201ENST00000340612 DCAF8L2P0C7V8 631 aa4.89□□□□□ -1.63
CCDC30-201ENST00000340612 GOLGA2Q08379 1002 aa4.89□□□□□ -1.63
CCDC30-201ENST00000340612 PKD2Q13563 968 aa4.88□□□□□ -1.63
CCDC30-201ENST00000340612 ANKRD13DQ6ZTN6 518 aa4.88□□□□□ -1.63
CCDC30-201ENST00000340612 ZNF687Q8N1G0 1237 aa4.88□□□□□ -1.63
CCDC30-201ENST00000340612 ZBTB47Q9UFB7 747 aaPredicted RBP4.88□□□□□ -1.63
CCDC30-201ENST00000340612 KLHL34Q8N239 644 aa4.88□□□□□ -1.63
CCDC30-201ENST00000340612 PLA2G2EQ9NZK7 142 aa4.87□□□□□ -1.63
CCDC30-201ENST00000340612 ILDR1Q86SU0 546 aaPredicted RBP4.87□□□□□ -1.63
CCDC30-201ENST00000340612 DOK7Q18PE1 504 aa4.86□□□□□ -1.63
CCDC30-201ENST00000340612 BOLA1Q9Y3E2 137 aa4.86□□□□□ -1.63
CCDC30-201ENST00000340612 SPOCK2Q92563 424 aa4.83□□□□□ -1.64
CCDC30-201ENST00000340612 PTGER2P43116 358 aa4.83□□□□□ -1.64
CCDC30-201ENST00000340612 PSEN1P49768 467 aa4.83□□□□□ -1.64
CCDC30-201ENST00000340612 GPR153Q6NV75 609 aa4.82□□□□□ -1.64
CCDC30-201ENST00000340612 TMEM92Q6UXU6 159 aa4.81□□□□□ -1.64
CCDC30-201ENST00000340612 G3V3G9 751 aa4.81□□□□□ -1.64
CCDC30-201ENST00000340612 ZNF467Q7Z7K2 595 aaPredicted RBP4.81□□□□□ -1.64
CCDC30-201ENST00000340612 RIMBP2O15034 1052 aa4.8□□□□□ -1.64
CCDC30-201ENST00000340612 ECM2O94769 699 aaPredicted RBP4.8□□□□□ -1.64
CCDC30-201ENST00000340612 LSM11P83369 360 aaKnown RBP eCLIP4.8□□□□□ -1.64
CCDC30-201ENST00000340612 PLCB2Q00722 1185 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms