RNA–Protein interactions for RNA: ENST00000340513.4

TPX2-202, Transcript of TPX2, microtubule nucleation factor, humanhuman

TSL 1 (best) BASIC

Gene TPX2, Length 3,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPX2-202ENST00000340513 TAF7LQ5H9L4 462 aa16.44■□□□□ 0.22
TPX2-202ENST00000340513 ANP32AP39687 249 aaKnown RBP16.43■□□□□ 0.22
TPX2-202ENST00000340513 TRIM52Q96A61 297 aa16.43■□□□□ 0.22
TPX2-202ENST00000340513 ARID4BQ4LE39 1312 aaPredicted RBP16.41■□□□□ 0.22
TPX2-202ENST00000340513 NAP1L5Q96NT1 182 aaPredicted RBP16.4■□□□□ 0.22
TPX2-202ENST00000340513 HNRNPUL2Q1KMD3 747 aaKnown RBP16.37■□□□□ 0.21
TPX2-202ENST00000340513 DHX37Q8IY37 1157 aaKnown RBP16.37■□□□□ 0.21
TPX2-202ENST00000340513 HSP90AA1P07900 732 aaKnown RBP16.34■□□□□ 0.21
TPX2-202ENST00000340513 NPM2Q86SE8 214 aaKnown RBP16.34■□□□□ 0.21
TPX2-202ENST00000340513 CHMP4BQ9H444 224 aaKnown RBP16.34■□□□□ 0.21
TPX2-202ENST00000340513 BBXQ8WY36 941 aaPredicted RBP16.32■□□□□ 0.2
TPX2-202ENST00000340513 NAP1L2Q9ULW6 460 aaPredicted RBP16.29■□□□□ 0.2
TPX2-202ENST00000340513 NCBP3Q53F19 620 aaKnown RBP16.28■□□□□ 0.2
TPX2-202ENST00000340513 RGS3P49796 1198 aa16.27■□□□□ 0.2
TPX2-202ENST00000340513 IPO9Q96P70 1041 aaKnown RBP16.24■□□□□ 0.19
TPX2-202ENST00000340513 C11orf95C9JLR9 678 aaPredicted RBP16.24■□□□□ 0.19
TPX2-202ENST00000340513 AMER1Q5JTC6 1135 aaPredicted RBP16.23■□□□□ 0.19
TPX2-202ENST00000340513 CECR2Q9BXF3 1484 aa16.21■□□□□ 0.19
TPX2-202ENST00000340513 RRP9O43818 475 aaKnown RBP16.21■□□□□ 0.19
TPX2-202ENST00000340513 HAP1P54257 671 aaPredicted RBP16.21■□□□□ 0.19
TPX2-202ENST00000340513 B4GALNT3Q6L9W6 998 aa16.2■□□□□ 0.18
TPX2-202ENST00000340513 GSE1Q14687 1217 aa16.19■□□□□ 0.18
TPX2-202ENST00000340513 USP35Q9P2H5 1018 aa16.18■□□□□ 0.18
TPX2-202ENST00000340513 EIF4G1Q04637 1599 aaKnown RBP16.16■□□□□ 0.18
TPX2-202ENST00000340513 FAM43AQ8N2R8 423 aa16.16■□□□□ 0.18
TPX2-202ENST00000340513 CANXP27824 592 aaKnown RBP16.14■□□□□ 0.17
TPX2-202ENST00000340513 PLCD3Q8N3E9 789 aa16.13■□□□□ 0.17
TPX2-202ENST00000340513 ARXQ96QS3 562 aa16.12■□□□□ 0.17
TPX2-202ENST00000340513 CHMP4AQ9BY43 222 aa16.12■□□□□ 0.17
TPX2-202ENST00000340513 CC2D2AQ9P2K1 1620 aa16.11■□□□□ 0.17
TPX2-202ENST00000340513 WASHC2AQ641Q2 1341 aa16.11■□□□□ 0.17
TPX2-202ENST00000340513 PNNQ9H307 717 aaKnown RBP16.11■□□□□ 0.17
TPX2-202ENST00000340513 WASHC2CQ9Y4E1 1318 aa16.1■□□□□ 0.17
TPX2-202ENST00000340513 FRAT1Q92837 279 aaPredicted RBP16.09■□□□□ 0.17
TPX2-202ENST00000340513 CNGB1Q14028 1251 aaPredicted RBP16.08■□□□□ 0.16
TPX2-202ENST00000340513 ZNF326Q5BKZ1 582 aaKnown RBP16.06■□□□□ 0.16
TPX2-202ENST00000340513 PPM1GO15355 546 aaPredicted RBP16.06■□□□□ 0.16
TPX2-202ENST00000340513 DDX10Q13206 875 aaKnown RBP16.06■□□□□ 0.16
TPX2-202ENST00000340513 PPP4R2Q9NY27 417 aa16.05■□□□□ 0.16
TPX2-202ENST00000340513 ARID3AQ99856 593 aa16.03■□□□□ 0.16
TPX2-202ENST00000340513 PLPPR3Q6T4P5 718 aa15.99■□□□□ 0.15
TPX2-202ENST00000340513 BRD2P25440 801 aaKnown RBP15.98■□□□□ 0.15
TPX2-202ENST00000340513 ZHX1Q9UKY1 873 aaPredicted RBP15.98■□□□□ 0.15
TPX2-202ENST00000340513 MROH2BQ7Z745 1585 aa15.98■□□□□ 0.15
TPX2-202ENST00000340513 HNRNPUQ00839 825 aaKnown RBP eCLIP15.97■□□□□ 0.15
TPX2-202ENST00000340513 GTF2E1P29083 439 aaPredicted RBP15.96■□□□□ 0.15
TPX2-202ENST00000340513 VGLL3A8MV65 326 aa15.96■□□□□ 0.15
TPX2-202ENST00000340513 RRAGDQ9NQL2 400 aaPredicted RBP15.96■□□□□ 0.15
TPX2-202ENST00000340513 TULP1O00294 542 aaPredicted RBP15.95■□□□□ 0.14
TPX2-202ENST00000340513 DCAF11Q8TEB1 546 aa15.93■□□□□ 0.14
TPX2-202ENST00000340513 ZFP91Q96JP5 570 aaPredicted RBP15.93■□□□□ 0.14
TPX2-202ENST00000340513 SMARCA4P51532 1647 aa15.92■□□□□ 0.14
TPX2-202ENST00000340513 BAZ1BQ9UIG0 1483 aaKnown RBP15.91■□□□□ 0.14
TPX2-202ENST00000340513 IPO4Q8TEX9 1081 aaKnown RBP15.91■□□□□ 0.14
TPX2-202ENST00000340513 MAPK8IP2Q13387 824 aaPredicted RBP15.91■□□□□ 0.14
TPX2-202ENST00000340513 PRDM4Q9UKN5 801 aa15.9■□□□□ 0.14
TPX2-202ENST00000340513 CALD1Q05682 793 aaKnown RBP15.89■□□□□ 0.13
TPX2-202ENST00000340513 STAC3Q96MF2 364 aa15.89■□□□□ 0.13
TPX2-202ENST00000340513 FOXD1Q16676 465 aa15.89■□□□□ 0.13
TPX2-202ENST00000340513 RSPH4AQ5TD94 716 aa15.88■□□□□ 0.13
TPX2-202ENST00000340513 HIRIP3Q9BW71 556 aaPredicted RBP15.88■□□□□ 0.13
TPX2-202ENST00000340513 NFKBIBQ15653 356 aa15.87■□□□□ 0.13
TPX2-202ENST00000340513 BAZ1AQ9NRL2 1556 aaPredicted RBP15.87■□□□□ 0.13
TPX2-202ENST00000340513 ANP32CO43423 234 aa15.85■□□□□ 0.13
TPX2-202ENST00000340513 ATAD2BQ9ULI0 1458 aa15.85■□□□□ 0.13
TPX2-202ENST00000340513 CDK11BP21127 795 aaKnown RBP15.83■□□□□ 0.12
TPX2-202ENST00000340513 WIZO95785 1651 aa15.83■□□□□ 0.12
TPX2-202ENST00000340513 PDCL3Q9H2J4 239 aa15.82■□□□□ 0.12
TPX2-202ENST00000340513 PRDM10Q9NQV6 1147 aa15.82■□□□□ 0.12
TPX2-202ENST00000340513 NCLP19338 710 aaKnown RBP15.82■□□□□ 0.12
TPX2-202ENST00000340513 SLC4A3P48751 1232 aa15.82■□□□□ 0.12
TPX2-202ENST00000340513 SIN3AQ96ST3 1273 aa15.81■□□□□ 0.12
TPX2-202ENST00000340513 RSF1Q96T23 1441 aaPredicted RBP15.8■□□□□ 0.12
TPX2-202ENST00000340513 ANP32BQ92688 251 aaKnown RBP15.8■□□□□ 0.12
TPX2-202ENST00000340513 SECISBP2LQ93073 1101 aaKnown RBP15.79■□□□□ 0.12
TPX2-202ENST00000340513 FTSJ3Q8IY81 847 aaKnown RBP15.78■□□□□ 0.12
TPX2-202ENST00000340513 SAMD1Q6SPF0 538 aaPredicted RBP15.77■□□□□ 0.12
TPX2-202ENST00000340513 TNNT2P45379 298 aaPredicted RBP15.76■□□□□ 0.11
TPX2-202ENST00000340513 E9PSI1 815 aa15.75■□□□□ 0.11
TPX2-202ENST00000340513 C14orf37Q86TY3 774 aa15.75■□□□□ 0.11
TPX2-202ENST00000340513 ZNF830Q96NB3 372 aaPredicted RBP15.73■□□□□ 0.11
TPX2-202ENST00000340513 FAM13BQ9NYF5 915 aa15.73■□□□□ 0.11
TPX2-202ENST00000340513 NCAPD3P42695 1498 aa15.72■□□□□ 0.11
TPX2-202ENST00000340513 FRAT2O75474 233 aaPredicted RBP15.71■□□□□ 0.11
TPX2-202ENST00000340513 DDRGK1Q96HY6 314 aa15.71■□□□□ 0.11
TPX2-202ENST00000340513 HOMEZQ8IX15 550 aa15.7■□□□□ 0.1
TPX2-202ENST00000340513 SMARCA2P51531 1590 aa15.7■□□□□ 0.1
TPX2-202ENST00000340513 DNTTIP2Q5QJE6 756 aaKnown RBP15.69■□□□□ 0.1
TPX2-202ENST00000340513 POLR3GLQ9BT43 218 aa15.67■□□□□ 0.1
TPX2-202ENST00000340513 UBTFP17480 764 aaKnown RBP15.66■□□□□ 0.1
TPX2-202ENST00000340513 CLCN1P35523 988 aa15.64■□□□□ 0.09
TPX2-202ENST00000340513 L1TD1Q5T7N2 865 aaKnown RBP15.64■□□□□ 0.09
TPX2-202ENST00000340513 SENP3-EIF4A1A0A087X0R7 540 aa15.63■□□□□ 0.09
TPX2-202ENST00000340513 CNPY4Q8N129 248 aa15.63■□□□□ 0.09
TPX2-202ENST00000340513 AEBP1Q8IUX7 1158 aa15.63■□□□□ 0.09
TPX2-202ENST00000340513 NESP48681 1621 aa15.62■□□□□ 0.09
TPX2-202ENST00000340513 WWC1Q8IX03 1113 aa15.61■□□□□ 0.09
TPX2-202ENST00000340513 PEG3Q9GZU2 1588 aa15.6■□□□□ 0.09
TPX2-202ENST00000340513 TPM2P07951 284 aa15.6■□□□□ 0.09
TPX2-202ENST00000340513 CERS3Q8IU89 383 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms