RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 WIZO95785 1651 aa21.83■■□□□ 1.08
CCNY-202ENST00000339497 TMC1Q8TDI8 760 aa21.83■■□□□ 1.08
CCNY-202ENST00000339497 BCL11AQ9H165 835 aa21.83■■□□□ 1.08
CCNY-202ENST00000339497 CUX2O14529 1486 aa21.82■■□□□ 1.08
CCNY-202ENST00000339497 CARMIL1Q5VZK9 1371 aa21.82■■□□□ 1.08
CCNY-202ENST00000339497 KCNH8Q96L42 1107 aa21.81■■□□□ 1.08
CCNY-202ENST00000339497 PLEKHD1A6NEE1 506 aa21.81■■□□□ 1.08
CCNY-202ENST00000339497 KANK4Q5T7N3 995 aaPredicted RBP21.76■■□□□ 1.07
CCNY-202ENST00000339497 CFDP1Q9UEE9 299 aaPredicted RBP21.76■■□□□ 1.07
CCNY-202ENST00000339497 CCNB3Q8WWL7 1395 aa21.76■■□□□ 1.07
CCNY-202ENST00000339497 NEFMP07197 916 aa21.74■■□□□ 1.07
CCNY-202ENST00000339497 IRX6P78412 446 aaPredicted RBP21.73■■□□□ 1.07
CCNY-202ENST00000339497 VPS8Q8N3P4 1428 aa21.73■■□□□ 1.07
CCNY-202ENST00000339497 STAG3Q9UJ98 1225 aa21.72■■□□□ 1.07
CCNY-202ENST00000339497 SLC24A1O60721 1099 aa21.72■■□□□ 1.07
CCNY-202ENST00000339497 RGL3Q3MIN7 710 aa21.71■■□□□ 1.07
CCNY-202ENST00000339497 NPM2Q86SE8 214 aaKnown RBP21.7■■□□□ 1.06
CCNY-202ENST00000339497 ESF1Q9H501 851 aaKnown RBP21.69■■□□□ 1.06
CCNY-202ENST00000339497 ZBTB47Q9UFB7 747 aaPredicted RBP21.67■■□□□ 1.06
CCNY-202ENST00000339497 TOP2AP11388 1531 aaKnown RBP21.66■■□□□ 1.06
CCNY-202ENST00000339497 ANP32AP39687 249 aaKnown RBP21.66■■□□□ 1.06
CCNY-202ENST00000339497 SENP3-EIF4A1A0A087X0R7 540 aa21.65■■□□□ 1.06
CCNY-202ENST00000339497 FHAD1B1AJZ9 1412 aa21.65■■□□□ 1.06
CCNY-202ENST00000339497 PLPPR3Q6T4P5 718 aa21.64■■□□□ 1.05
CCNY-202ENST00000339497 SMARCA2P51531 1590 aa21.63■■□□□ 1.05
CCNY-202ENST00000339497 CCDC136Q96JN2 1154 aa21.61■■□□□ 1.05
CCNY-202ENST00000339497 SENP3Q9H4L4 574 aaPredicted RBP21.61■■□□□ 1.05
CCNY-202ENST00000339497 TDRD9Q8NDG6 1382 aaKnown RBP21.56■■□□□ 1.04
CCNY-202ENST00000339497 WDR43Q15061 677 aaKnown RBP eCLIP21.55■■□□□ 1.04
CCNY-202ENST00000339497 RUSC2Q8N2Y8 1516 aa21.55■■□□□ 1.04
CCNY-202ENST00000339497 EIF4G1Q04637 1599 aaKnown RBP21.54■■□□□ 1.04
CCNY-202ENST00000339497 ERCC6Q03468 1493 aa21.53■■□□□ 1.04
CCNY-202ENST00000339497 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
CCNY-202ENST00000339497 CARD11Q9BXL7 1154 aa21.51■■□□□ 1.03
CCNY-202ENST00000339497 RAPGEF2Q9Y4G8 1499 aa21.48■■□□□ 1.03
CCNY-202ENST00000339497 SETD5Q9C0A6 1442 aa21.46■■□□□ 1.03
CCNY-202ENST00000339497 SMARCA4P51532 1647 aa21.45■■□□□ 1.03
CCNY-202ENST00000339497 SUPT16HQ9Y5B9 1047 aaKnown RBP21.44■■□□□ 1.02
CCNY-202ENST00000339497 CADPSQ9ULU8 1353 aa21.43■■□□□ 1.02
CCNY-202ENST00000339497 RAB3GAP2Q9H2M9 1393 aa21.41■■□□□ 1.02
CCNY-202ENST00000339497 FOXD1Q16676 465 aa21.41■■□□□ 1.02
CCNY-202ENST00000339497 ARHGAP35Q9NRY4 1499 aa21.4■■□□□ 1.02
CCNY-202ENST00000339497 TIMELESSQ9UNS1 1208 aa21.38■■□□□ 1.01
CCNY-202ENST00000339497 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.38■■□□□ 1.01
CCNY-202ENST00000339497 PDS5BQ9NTI5 1447 aa21.36■■□□□ 1.01
CCNY-202ENST00000339497 DCAF11Q8TEB1 546 aa21.33■■□□□ 1.01
CCNY-202ENST00000339497 FHOD3Q2V2M9 1422 aa21.33■■□□□ 1.01
CCNY-202ENST00000339497 KNSTRNQ9Y448 316 aa21.31■■□□□ 1
CCNY-202ENST00000339497 FMN1Q68DA7 1419 aa21.3■■□□□ 1
CCNY-202ENST00000339497 HSPA5P11021 654 aaKnown RBP21.28■■□□□ 1
CCNY-202ENST00000339497 PKD2Q13563 968 aa21.27■■□□□ 1
CCNY-202ENST00000339497 NBR1Q14596 966 aa21.26■□□□□ 0.99
CCNY-202ENST00000339497 UPF2Q9HAU5 1272 aaKnown RBP21.26■□□□□ 0.99
CCNY-202ENST00000339497 PPP1R15AO75807 674 aaPredicted RBP21.24■□□□□ 0.99
CCNY-202ENST00000339497 MPHOSPH9Q99550 1183 aa21.24■□□□□ 0.99
CCNY-202ENST00000339497 CDCA8Q53HL2 280 aa21.24■□□□□ 0.99
CCNY-202ENST00000339497 CC2D1BQ5T0F9 858 aaKnown RBP21.22■□□□□ 0.99
CCNY-202ENST00000339497 HSP90AA1P07900 732 aaKnown RBP21.2■□□□□ 0.98
CCNY-202ENST00000339497 NEUROD2Q15784 382 aa21.19■□□□□ 0.98
CCNY-202ENST00000339497 CCER2I3L3R5 266 aa21.16■□□□□ 0.98
CCNY-202ENST00000339497 TNNT2P45379 298 aaPredicted RBP21.16■□□□□ 0.98
CCNY-202ENST00000339497 CARMIL2Q6F5E8 1435 aa21.15■□□□□ 0.98
CCNY-202ENST00000339497 DHX57Q6P158 1386 aaKnown RBP21.14■□□□□ 0.98
CCNY-202ENST00000339497 PLEKHG5O94827 1062 aa21.14■□□□□ 0.97
CCNY-202ENST00000339497 PPM1GO15355 546 aaPredicted RBP21.14■□□□□ 0.97
CCNY-202ENST00000339497 L3MBTL2Q969R5 705 aa21.13■□□□□ 0.97
CCNY-202ENST00000339497 FANCD2Q9BXW9 1451 aa21.12■□□□□ 0.97
CCNY-202ENST00000339497 NUP155O75694 1391 aa21.12■□□□□ 0.97
CCNY-202ENST00000339497 B4GALNT3Q6L9W6 998 aa21.11■□□□□ 0.97
CCNY-202ENST00000339497 CFAP53Q96M91 514 aa21.11■□□□□ 0.97
CCNY-202ENST00000339497 PPP4R2Q9NY27 417 aa21.11■□□□□ 0.97
CCNY-202ENST00000339497 TMF1P82094 1093 aa21.1■□□□□ 0.97
CCNY-202ENST00000339497 IGF1RP08069 1367 aa21.09■□□□□ 0.97
CCNY-202ENST00000339497 ARID4BQ4LE39 1312 aaPredicted RBP21.09■□□□□ 0.97
CCNY-202ENST00000339497 HNRNPMP52272 730 aaKnown RBP eCLIP21.06■□□□□ 0.967e-7■■■■□ 22.6
CCNY-202ENST00000339497 JPH4Q96JJ6 628 aa21.06■□□□□ 0.96
CCNY-202ENST00000339497 C14orf37Q86TY3 774 aa21.05■□□□□ 0.96
CCNY-202ENST00000339497 POGKQ9P215 609 aa21.05■□□□□ 0.96
CCNY-202ENST00000339497 GGT6Q6P531 493 aa21.04■□□□□ 0.96
CCNY-202ENST00000339497 ANKRD30AQ9BXX3 1397 aa21.03■□□□□ 0.96
CCNY-202ENST00000339497 ZBTB7CA1YPR0 619 aa21.02■□□□□ 0.96
CCNY-202ENST00000339497 FGD5Q6ZNL6 1462 aa21■□□□□ 0.95
CCNY-202ENST00000339497 EFCAB2Q5VUJ9 269 aa21■□□□□ 0.95
CCNY-202ENST00000339497 SAFB2Q14151 953 aaKnown RBP eCLIP20.99■□□□□ 0.95
CCNY-202ENST00000339497 ARXQ96QS3 562 aa20.99■□□□□ 0.95
CCNY-202ENST00000339497 KANK1Q14678 1352 aa20.99■□□□□ 0.95
CCNY-202ENST00000339497 RAD54L2Q9Y4B4 1467 aa20.98■□□□□ 0.95
CCNY-202ENST00000339497 FRAT1Q92837 279 aaPredicted RBP20.98■□□□□ 0.95
CCNY-202ENST00000339497 MYH16Q9H6N6 1097 aa20.96■□□□□ 0.95
CCNY-202ENST00000339497 MLECQ14165 292 aa20.96■□□□□ 0.95
CCNY-202ENST00000339497 U2SURPO15042 1029 aaKnown RBP20.95■□□□□ 0.94
CCNY-202ENST00000339497 RGS3P49796 1198 aa20.95■□□□□ 0.94
CCNY-202ENST00000339497 LAS1LQ9Y4W2 734 aaKnown RBP20.95■□□□□ 0.94
CCNY-202ENST00000339497 CCDC18Q5T9S5 1454 aa20.94■□□□□ 0.94
CCNY-202ENST00000339497 ROCK2O75116 1388 aaKnown RBP20.94■□□□□ 0.94
CCNY-202ENST00000339497 MAPK8IP3Q9UPT6 1336 aa20.94■□□□□ 0.94
CCNY-202ENST00000339497 NUDCQ9Y266 331 aa20.93■□□□□ 0.94
CCNY-202ENST00000339497 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
CCNY-202ENST00000339497 FTSJ3Q8IY81 847 aaKnown RBP20.92■□□□□ 0.94
CCNY-202ENST00000339497 KIF21BO75037 1637 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms