RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 SALL2Q9Y467 1007 aaPredicted RBP22.95■■□□□ 1.26
TRAPPC11-201ENST00000334690 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.94■■□□□ 1.26
TRAPPC11-201ENST00000334690 SLC24A1O60721 1099 aa22.93■■□□□ 1.26
TRAPPC11-201ENST00000334690 BCL11AQ9H165 835 aa22.92■■□□□ 1.26
TRAPPC11-201ENST00000334690 ESF1Q9H501 851 aaKnown RBP22.92■■□□□ 1.26
TRAPPC11-201ENST00000334690 UPF2Q9HAU5 1272 aaKnown RBP22.91■■□□□ 1.26
TRAPPC11-201ENST00000334690 WDR43Q15061 677 aaKnown RBP eCLIP22.9■■□□□ 1.26
TRAPPC11-201ENST00000334690 STAG3Q9UJ98 1225 aa22.89■■□□□ 1.25
TRAPPC11-201ENST00000334690 PLEKHD1A6NEE1 506 aa22.88■■□□□ 1.25
TRAPPC11-201ENST00000334690 SOGA1O94964 1423 aa22.84■■□□□ 1.25
TRAPPC11-201ENST00000334690 CCNB3Q8WWL7 1395 aa22.82■■□□□ 1.24
TRAPPC11-201ENST00000334690 FHAD1B1AJZ9 1412 aa22.81■■□□□ 1.24
TRAPPC11-201ENST00000334690 CFDP1Q9UEE9 299 aaPredicted RBP22.79■■□□□ 1.24
TRAPPC11-201ENST00000334690 TIMELESSQ9UNS1 1208 aa22.78■■□□□ 1.24
TRAPPC11-201ENST00000334690 IRX6P78412 446 aaPredicted RBP22.77■■□□□ 1.24
TRAPPC11-201ENST00000334690 MROH2BQ7Z745 1585 aa22.77■■□□□ 1.23
TRAPPC11-201ENST00000334690 HSP90AA1P07900 732 aaKnown RBP22.75■■□□□ 1.23
TRAPPC11-201ENST00000334690 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
TRAPPC11-201ENST00000334690 SIN3AQ96ST3 1273 aa22.73■■□□□ 1.23
TRAPPC11-201ENST00000334690 CARMIL1Q5VZK9 1371 aa22.72■■□□□ 1.23
TRAPPC11-201ENST00000334690 CCDC88BA6NC98 1476 aa22.7■■□□□ 1.22
TRAPPC11-201ENST00000334690 ANP32BQ92688 251 aaKnown RBP22.67■■□□□ 1.22
TRAPPC11-201ENST00000334690 CUX2O14529 1486 aa22.65■■□□□ 1.22
TRAPPC11-201ENST00000334690 RGL3Q3MIN7 710 aa22.65■■□□□ 1.22
TRAPPC11-201ENST00000334690 CDCA8Q53HL2 280 aa22.65■■□□□ 1.22
TRAPPC11-201ENST00000334690 KCNH8Q96L42 1107 aa22.63■■□□□ 1.21
TRAPPC11-201ENST00000334690 CARD11Q9BXL7 1154 aa22.63■■□□□ 1.21
TRAPPC11-201ENST00000334690 SUPT16HQ9Y5B9 1047 aaKnown RBP22.62■■□□□ 1.21
TRAPPC11-201ENST00000334690 NBR1Q14596 966 aa22.6■■□□□ 1.21
TRAPPC11-201ENST00000334690 ABCC8Q09428 1581 aa22.58■■□□□ 1.2
TRAPPC11-201ENST00000334690 KNSTRNQ9Y448 316 aa22.55■■□□□ 1.2
TRAPPC11-201ENST00000334690 SETD5Q9C0A6 1442 aa22.55■■□□□ 1.2
TRAPPC11-201ENST00000334690 CCER2I3L3R5 266 aa22.51■■□□□ 1.19
TRAPPC11-201ENST00000334690 PPP4R2Q9NY27 417 aa22.51■■□□□ 1.19
TRAPPC11-201ENST00000334690 SMARCA2P51531 1590 aa22.51■■□□□ 1.19
TRAPPC11-201ENST00000334690 KANK4Q5T7N3 995 aaPredicted RBP22.5■■□□□ 1.19
TRAPPC11-201ENST00000334690 DDRGK1Q96HY6 314 aa22.5■■□□□ 1.19
TRAPPC11-201ENST00000334690 CFAP53Q96M91 514 aa22.48■■□□□ 1.19
TRAPPC11-201ENST00000334690 MYH16Q9H6N6 1097 aa22.46■■□□□ 1.19
TRAPPC11-201ENST00000334690 ARHGAP35Q9NRY4 1499 aa22.46■■□□□ 1.19
TRAPPC11-201ENST00000334690 TOP2AP11388 1531 aaKnown RBP22.46■■□□□ 1.19
TRAPPC11-201ENST00000334690 EIF5BO60841 1220 aaKnown RBP22.42■■□□□ 1.18
TRAPPC11-201ENST00000334690 BECN1Q14457 450 aa22.42■■□□□ 1.18
TRAPPC11-201ENST00000334690 ANP32EQ9BTT0 268 aa22.4■■□□□ 1.18
TRAPPC11-201ENST00000334690 RAB3GAP2Q9H2M9 1393 aa22.38■■□□□ 1.17
TRAPPC11-201ENST00000334690 FMN1Q68DA7 1419 aa22.37■■□□□ 1.17
TRAPPC11-201ENST00000334690 PPP1R15AO75807 674 aaPredicted RBP22.37■■□□□ 1.17
TRAPPC11-201ENST00000334690 WIZO95785 1651 aa22.37■■□□□ 1.17
TRAPPC11-201ENST00000334690 PLPPR3Q6T4P5 718 aa22.37■■□□□ 1.17
TRAPPC11-201ENST00000334690 SENP3-EIF4A1A0A087X0R7 540 aa22.35■■□□□ 1.17
TRAPPC11-201ENST00000334690 EIF4G1Q04637 1599 aaKnown RBP22.34■■□□□ 1.17
TRAPPC11-201ENST00000334690 DCAF11Q8TEB1 546 aa22.33■■□□□ 1.17
TRAPPC11-201ENST00000334690 ERCC6Q03468 1493 aa22.32■■□□□ 1.16
TRAPPC11-201ENST00000334690 HSPA5P11021 654 aaKnown RBP22.32■■□□□ 1.16
TRAPPC11-201ENST00000334690 TMF1P82094 1093 aa22.31■■□□□ 1.16
TRAPPC11-201ENST00000334690 PPM1GO15355 546 aaPredicted RBP22.29■■□□□ 1.16
TRAPPC11-201ENST00000334690 NUDCQ9Y266 331 aa22.28■■□□□ 1.16
TRAPPC11-201ENST00000334690 PDS5BQ9NTI5 1447 aa22.25■■□□□ 1.15
TRAPPC11-201ENST00000334690 B4GALNT3Q6L9W6 998 aa22.24■■□□□ 1.15
TRAPPC11-201ENST00000334690 FTSJ3Q8IY81 847 aaKnown RBP22.24■■□□□ 1.15
TRAPPC11-201ENST00000334690 ERICH6BQ5W0A0 696 aa22.24■■□□□ 1.15
TRAPPC11-201ENST00000334690 PKD2Q13563 968 aa22.24■■□□□ 1.15
TRAPPC11-201ENST00000334690 CC2D1BQ5T0F9 858 aaKnown RBP22.24■■□□□ 1.15
TRAPPC11-201ENST00000334690 MAPK8IP3Q9UPT6 1336 aa22.23■■□□□ 1.15
TRAPPC11-201ENST00000334690 ARXQ96QS3 562 aa22.23■■□□□ 1.15
TRAPPC11-201ENST00000334690 NEUROD2Q15784 382 aa22.23■■□□□ 1.15
TRAPPC11-201ENST00000334690 MPHOSPH9Q99550 1183 aa22.22■■□□□ 1.15
TRAPPC11-201ENST00000334690 TDRD9Q8NDG6 1382 aaKnown RBP22.22■■□□□ 1.15
TRAPPC11-201ENST00000334690 RAPGEF2Q9Y4G8 1499 aa22.21■■□□□ 1.15
TRAPPC11-201ENST00000334690 SENP3Q9H4L4 574 aaPredicted RBP22.2■■□□□ 1.14
TRAPPC11-201ENST00000334690 CARMIL2Q6F5E8 1435 aa22.2■■□□□ 1.14
TRAPPC11-201ENST00000334690 CADPSQ9ULU8 1353 aa22.19■■□□□ 1.14
TRAPPC11-201ENST00000334690 GOLGA6L22H0YM25 854 aa22.18■■□□□ 1.14
TRAPPC11-201ENST00000334690 MS4A1P11836 297 aa22.18■■□□□ 1.14
TRAPPC11-201ENST00000334690 KANK1Q14678 1352 aa22.18■■□□□ 1.14
TRAPPC11-201ENST00000334690 POGKQ9P215 609 aa22.17■■□□□ 1.14
TRAPPC11-201ENST00000334690 NOP58Q9Y2X3 529 aaKnown RBP22.16■■□□□ 1.14
TRAPPC11-201ENST00000334690 ATAD2BQ9ULI0 1458 aa22.16■■□□□ 1.14
TRAPPC11-201ENST00000334690 RGS3P49796 1198 aa22.15■■□□□ 1.14
TRAPPC11-201ENST00000334690 CHMP4BQ9H444 224 aaKnown RBP22.15■■□□□ 1.14
TRAPPC11-201ENST00000334690 GLIPR1L2Q4G1C9 344 aa22.14■■□□□ 1.14
TRAPPC11-201ENST00000334690 FOXD1Q16676 465 aa22.14■■□□□ 1.13
TRAPPC11-201ENST00000334690 FRAT1Q92837 279 aaPredicted RBP22.13■■□□□ 1.13
TRAPPC11-201ENST00000334690 ANKRD30AQ9BXX3 1397 aa22.12■■□□□ 1.13
TRAPPC11-201ENST00000334690 SMARCA4P51532 1647 aa22.12■■□□□ 1.13
TRAPPC11-201ENST00000334690 KTN1Q86UP2 1357 aaKnown RBP22.11■■□□□ 1.13
TRAPPC11-201ENST00000334690 NUP155O75694 1391 aa22.1■■□□□ 1.13
TRAPPC11-201ENST00000334690 C14orf37Q86TY3 774 aa22.1■■□□□ 1.13
TRAPPC11-201ENST00000334690 PNNQ9H307 717 aaKnown RBP22.1■■□□□ 1.13
TRAPPC11-201ENST00000334690 FHOD3Q2V2M9 1422 aa22.1■■□□□ 1.13
TRAPPC11-201ENST00000334690 TNNT2P45379 298 aaPredicted RBP22.09■■□□□ 1.13
TRAPPC11-201ENST00000334690 DHX57Q6P158 1386 aaKnown RBP22.09■■□□□ 1.13
TRAPPC11-201ENST00000334690 RALBP1Q15311 655 aa22.09■■□□□ 1.13
TRAPPC11-201ENST00000334690 RBM19Q9Y4C8 960 aaKnown RBP22.08■■□□□ 1.13
TRAPPC11-201ENST00000334690 NCLP19338 710 aaKnown RBP22.08■■□□□ 1.12
TRAPPC11-201ENST00000334690 L3MBTL2Q969R5 705 aa22.07■■□□□ 1.12
TRAPPC11-201ENST00000334690 RUSC2Q8N2Y8 1516 aa22.07■■□□□ 1.12
TRAPPC11-201ENST00000334690 TRIM44Q96DX7 344 aaPredicted RBP22.07■■□□□ 1.12
TRAPPC11-201ENST00000334690 CASC1Q6TDU7 716 aa22.07■■□□□ 1.12
TRAPPC11-201ENST00000334690 U2SURPO15042 1029 aaKnown RBP22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms