RNA–Protein interactions for RNA: ENST00000334318.10

PTBP3-202, Transcript of polypyrimidine tract binding protein 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP3, Length 7,990 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP3-202ENST00000334318 NEFMP07197 916 aa8.68□□□□□ -1.02
PTBP3-202ENST00000334318 RRP7BPQ9NSQ0 103 aa8.68□□□□□ -1.02
PTBP3-202ENST00000334318 SAFB2Q14151 953 aaKnown RBP eCLIP8.68□□□□□ -1.02
PTBP3-202ENST00000334318 ACIN1Q9UKV3 1341 aaKnown RBP8.66□□□□□ -1.02
PTBP3-202ENST00000334318 PIP4K2BP78356 416 aa8.66□□□□□ -1.02
PTBP3-202ENST00000334318 PPM1GO15355 546 aaPredicted RBP8.65□□□□□ -1.03
PTBP3-202ENST00000334318 SMARCA2P51531 1590 aa8.65□□□□□ -1.03
PTBP3-202ENST00000334318 ANP32CO43423 234 aa8.64□□□□□ -1.03
PTBP3-202ENST00000334318 NUTM2FA1L443 756 aa8.64□□□□□ -1.03
PTBP3-202ENST00000334318 ZCCHC6Q5VYS8 1495 aaKnown RBP8.64□□□□□ -1.03
PTBP3-202ENST00000334318 CFDP1Q9UEE9 299 aaPredicted RBP8.63□□□□□ -1.03
PTBP3-202ENST00000334318 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
PTBP3-202ENST00000334318 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.63□□□□□ -1.03
PTBP3-202ENST00000334318 MTUS2Q5JR59 1369 aa8.62□□□□□ -1.03
PTBP3-202ENST00000334318 PAK3O75914 559 aaPredicted RBP8.62□□□□□ -1.03
PTBP3-202ENST00000334318 PDS5BQ9NTI5 1447 aa8.62□□□□□ -1.03
PTBP3-202ENST00000334318 STK26Q9P289 416 aa8.61□□□□□ -1.03
PTBP3-202ENST00000334318 DCAF1Q9Y4B6 1507 aa8.61□□□□□ -1.03
PTBP3-202ENST00000334318 POGKQ9P215 609 aa8.59□□□□□ -1.03
PTBP3-202ENST00000334318 MSH5O43196 834 aa8.59□□□□□ -1.03
PTBP3-202ENST00000334318 RSF1Q96T23 1441 aaPredicted RBP8.58□□□□□ -1.04
PTBP3-202ENST00000334318 CLSPNQ9HAW4 1339 aa8.58□□□□□ -1.04
PTBP3-202ENST00000334318 RTL5Q5HYW3 569 aaPredicted RBP8.58□□□□□ -1.04
PTBP3-202ENST00000334318 SALL2Q9Y467 1007 aaPredicted RBP8.58□□□□□ -1.04
PTBP3-202ENST00000334318 CSB-PGBD3P0DP91 1061 aa8.56□□□□□ -1.04
PTBP3-202ENST00000334318 CANXP27824 592 aaKnown RBP8.55□□□□□ -1.04
PTBP3-202ENST00000334318 SENP3-EIF4A1A0A087X0R7 540 aa8.55□□□□□ -1.04
PTBP3-202ENST00000334318 NACADO15069 1562 aa8.55□□□□□ -1.04
PTBP3-202ENST00000334318 NUTM2BA6NNL0 878 aaPredicted RBP8.55□□□□□ -1.04
PTBP3-202ENST00000334318 NUTM2EB1AL46 878 aaPredicted RBP8.55□□□□□ -1.04
PTBP3-202ENST00000334318 NUTM2AQ8IVF1 878 aaPredicted RBP8.55□□□□□ -1.04
PTBP3-202ENST00000334318 ZNF330Q9Y3S2 320 aaPredicted RBP8.54□□□□□ -1.04
PTBP3-202ENST00000334318 ZBTB47Q9UFB7 747 aaPredicted RBP8.53□□□□□ -1.04
PTBP3-202ENST00000334318 TNNT2P45379 298 aaPredicted RBP8.52□□□□□ -1.05
PTBP3-202ENST00000334318 MYO15BQ96JP2 1530 aa8.52□□□□□ -1.05
PTBP3-202ENST00000334318 SOGA1O94964 1423 aa8.51□□□□□ -1.05
PTBP3-202ENST00000334318 PPP1R1BQ9UD71 204 aaPredicted RBP8.51□□□□□ -1.05
PTBP3-202ENST00000334318 JPH4Q96JJ6 628 aa8.51□□□□□ -1.05
PTBP3-202ENST00000334318 CUX2O14529 1486 aa8.5□□□□□ -1.05
PTBP3-202ENST00000334318 DDX10Q13206 875 aaKnown RBP8.49□□□□□ -1.05
PTBP3-202ENST00000334318 DCAF8L1A6NGE4 600 aa8.49□□□□□ -1.05
PTBP3-202ENST00000334318 KIF3BO15066 747 aa8.49□□□□□ -1.05
PTBP3-202ENST00000334318 EID1Q9Y6B2 187 aa8.48□□□□□ -1.05
PTBP3-202ENST00000334318 HIRIP3Q9BW71 556 aaPredicted RBP8.47□□□□□ -1.05
PTBP3-202ENST00000334318 FKBP8Q14318 412 aa8.47□□□□□ -1.05
PTBP3-202ENST00000334318 HNRNPMP52272 730 aaKnown RBP eCLIP8.46□□□□□ -1.058e-6■□□□□ 8.6
PTBP3-202ENST00000334318 TONSLQ96HA7 1378 aa8.46□□□□□ -1.05
PTBP3-202ENST00000334318 TULP1O00294 542 aaPredicted RBP8.45□□□□□ -1.06
PTBP3-202ENST00000334318 MIER1Q8N108 512 aa8.45□□□□□ -1.06
PTBP3-202ENST00000334318 HDGFP51858 240 aaKnown RBP8.45□□□□□ -1.06
PTBP3-202ENST00000334318 WASHC2CQ9Y4E1 1318 aa8.45□□□□□ -1.06
PTBP3-202ENST00000334318 HNRNPUQ00839 825 aaKnown RBP eCLIP8.44□□□□□ -1.06
PTBP3-202ENST00000334318 WRNQ14191 1432 aaPredicted RBP eCLIP8.44□□□□□ -1.06
PTBP3-202ENST00000334318 SRPK2P78362 688 aaKnown RBP8.43□□□□□ -1.06
PTBP3-202ENST00000334318 CARMIL2Q6F5E8 1435 aa8.43□□□□□ -1.06
PTBP3-202ENST00000334318 EFCAB2Q5VUJ9 269 aa8.43□□□□□ -1.06
PTBP3-202ENST00000334318 LTV1Q96GA3 475 aaPredicted RBP8.42□□□□□ -1.06
PTBP3-202ENST00000334318 CADPSQ9ULU8 1353 aa8.42□□□□□ -1.06
PTBP3-202ENST00000334318 CEP164Q9UPV0 1460 aa8.42□□□□□ -1.06
PTBP3-202ENST00000334318 CLIP1P30622 1438 aa8.42□□□□□ -1.06
PTBP3-202ENST00000334318 CARMIL1Q5VZK9 1371 aa8.42□□□□□ -1.06
PTBP3-202ENST00000334318 CCNB3Q8WWL7 1395 aa8.41□□□□□ -1.06
PTBP3-202ENST00000334318 KIF27Q86VH2 1401 aa8.41□□□□□ -1.06
PTBP3-202ENST00000334318 LAS1LQ9Y4W2 734 aaKnown RBP8.41□□□□□ -1.06
PTBP3-202ENST00000334318 EVA1CP58658 441 aa8.41□□□□□ -1.06
PTBP3-202ENST00000334318 FAM9BQ8IZU0 186 aa8.41□□□□□ -1.06
PTBP3-202ENST00000334318 TAOK2Q9UL54 1235 aa8.41□□□□□ -1.06
PTBP3-202ENST00000334318 USP35Q9P2H5 1018 aa8.41□□□□□ -1.06
PTBP3-202ENST00000334318 CCDC180Q9P1Z9 1646 aa8.41□□□□□ -1.06
PTBP3-202ENST00000334318 AQRO60306 1485 aaKnown RBP eCLIP8.4□□□□□ -1.073e-6■□□□□ 10.9
PTBP3-202ENST00000334318 SF3B2Q13435 895 aaKnown RBP8.4□□□□□ -1.07
PTBP3-202ENST00000334318 SYTL4Q96C24 671 aaPredicted RBP8.4□□□□□ -1.07
PTBP3-202ENST00000334318 KANK1Q14678 1352 aa8.38□□□□□ -1.07
PTBP3-202ENST00000334318 CEP162Q5TB80 1403 aa8.38□□□□□ -1.07
PTBP3-202ENST00000334318 NGDNQ8NEJ9 315 aaKnown RBP8.37□□□□□ -1.07
PTBP3-202ENST00000334318 ANP32AP39687 249 aaKnown RBP8.37□□□□□ -1.07
PTBP3-202ENST00000334318 NEUROD2Q15784 382 aa8.37□□□□□ -1.07
PTBP3-202ENST00000334318 NESP48681 1621 aa8.37□□□□□ -1.07
PTBP3-202ENST00000334318 PTPRGP23470 1445 aa8.37□□□□□ -1.07
PTBP3-202ENST00000334318 SPAG9O60271 1321 aaKnown RBP8.36□□□□□ -1.07
PTBP3-202ENST00000334318 FOXD1Q16676 465 aa8.36□□□□□ -1.07
PTBP3-202ENST00000334318 RBM33Q96EV2 1170 aaKnown RBP8.35□□□□□ -1.07
PTBP3-202ENST00000334318 FANCD2Q9BXW9 1451 aa8.35□□□□□ -1.07
PTBP3-202ENST00000334318 ATF3P18847 181 aa8.34□□□□□ -1.07
PTBP3-202ENST00000334318 MRS2Q9HD23 443 aa8.34□□□□□ -1.08
PTBP3-202ENST00000334318 NUTM2GQ5VZR2 741 aa8.33□□□□□ -1.08
PTBP3-202ENST00000334318 EEA1Q15075 1411 aa8.33□□□□□ -1.08
PTBP3-202ENST00000334318 PROSER2Q86WR7 435 aaPredicted RBP8.33□□□□□ -1.08
PTBP3-202ENST00000334318 ISY1Q9ULR0 285 aaKnown RBP8.32□□□□□ -1.08
PTBP3-202ENST00000334318 RAPGEF3O95398 923 aa8.32□□□□□ -1.08
PTBP3-202ENST00000334318 GOLGA3Q08378 1498 aa8.32□□□□□ -1.08
PTBP3-202ENST00000334318 U2SURPO15042 1029 aaKnown RBP8.32□□□□□ -1.08
PTBP3-202ENST00000334318 HSPA2P54652 639 aa8.32□□□□□ -1.08
PTBP3-202ENST00000334318 CEBPAP49715 358 aaPredicted RBP8.32□□□□□ -1.08
PTBP3-202ENST00000334318 IRX6P78412 446 aaPredicted RBP8.32□□□□□ -1.08
PTBP3-202ENST00000334318 TNIKQ9UKE5 1360 aa8.31□□□□□ -1.08
PTBP3-202ENST00000334318 DCAF11Q8TEB1 546 aa8.31□□□□□ -1.08
PTBP3-202ENST00000334318 UBAP1LF5GYI3 381 aa8.3□□□□□ -1.08
PTBP3-202ENST00000334318 RAD54L2Q9Y4B4 1467 aa8.3□□□□□ -1.08
PTBP3-202ENST00000334318 CCDC136Q96JN2 1154 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms