RNA–Protein interactions for RNA: ENST00000334082.10

HOMER1-202, Transcript of homer scaffold protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOMER1, Length 5,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER1-202ENST00000334082 CHGAP10645 457 aaKnown RBP28.71■■■□□ 2.19
HOMER1-202ENST00000334082 TPRNQ4KMQ1 711 aa28.7■■■□□ 2.19
HOMER1-202ENST00000334082 PLCB2Q00722 1185 aa28.63■■■□□ 2.17
HOMER1-202ENST00000334082 STAG3Q9UJ98 1225 aa28.59■■■□□ 2.17
HOMER1-202ENST00000334082 GOLGA6L6A8MZA4 724 aa28.59■■■□□ 2.17
HOMER1-202ENST00000334082 CSRNP3Q8WYN3 585 aa28.58■■■□□ 2.17
HOMER1-202ENST00000334082 CASC1Q6TDU7 716 aa28.58■■■□□ 2.17
HOMER1-202ENST00000334082 DEKP35659 375 aaKnown RBP28.57■■■□□ 2.16
HOMER1-202ENST00000334082 CHAF1AQ13111 956 aaPredicted RBP28.54■■■□□ 2.16
HOMER1-202ENST00000334082 DCAF1Q9Y4B6 1507 aa28.52■■■□□ 2.16
HOMER1-202ENST00000334082 SUPT16HQ9Y5B9 1047 aaKnown RBP28.51■■■□□ 2.15
HOMER1-202ENST00000334082 MSNP26038 577 aaKnown RBP28.5■■■□□ 2.15
HOMER1-202ENST00000334082 ESF1Q9H501 851 aaKnown RBP28.48■■■□□ 2.15
HOMER1-202ENST00000334082 HIRIP3Q9BW71 556 aaPredicted RBP28.48■■■□□ 2.15
HOMER1-202ENST00000334082 L1TD1Q5T7N2 865 aaKnown RBP28.47■■■□□ 2.15
HOMER1-202ENST00000334082 NRDCO43847 1150 aa28.45■■■□□ 2.15
HOMER1-202ENST00000334082 ARID4BQ4LE39 1312 aaPredicted RBP28.44■■■□□ 2.14
HOMER1-202ENST00000334082 PPP4R2Q9NY27 417 aa28.43■■■□□ 2.14
HOMER1-202ENST00000334082 HSP90AB1P08238 724 aaKnown RBP28.41■■■□□ 2.14
HOMER1-202ENST00000334082 KDM2AQ9Y2K7 1162 aa28.41■■■□□ 2.14
HOMER1-202ENST00000334082 EIF4G2P78344 907 aaKnown RBP eCLIP28.37■■■□□ 2.13
HOMER1-202ENST00000334082 TULP1O00294 542 aaPredicted RBP28.36■■■□□ 2.13
HOMER1-202ENST00000334082 RGS3P49796 1198 aa28.35■■■□□ 2.13
HOMER1-202ENST00000334082 CHIC2Q9UKJ5 165 aa28.34■■■□□ 2.13
HOMER1-202ENST00000334082 FTSJ3Q8IY81 847 aaKnown RBP28.34■■■□□ 2.13
HOMER1-202ENST00000334082 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.3■■■□□ 2.121e-6■■□□□ 11.7
HOMER1-202ENST00000334082 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.29■■■□□ 2.12
HOMER1-202ENST00000334082 SENP3-EIF4A1A0A087X0R7 540 aa28.27■■■□□ 2.12
HOMER1-202ENST00000334082 TNNT3P45378 269 aaPredicted RBP28.27■■■□□ 2.12
HOMER1-202ENST00000334082 ARID3AQ99856 593 aa28.22■■■□□ 2.11
HOMER1-202ENST00000334082 HSCBQ8IWL3 235 aa28.22■■■□□ 2.11
HOMER1-202ENST00000334082 DRC7Q8IY82 874 aa28.21■■■□□ 2.11
HOMER1-202ENST00000334082 GOLGA6L4A6NEF3 574 aa28.18■■■□□ 2.1
HOMER1-202ENST00000334082 TAOK2Q9UL54 1235 aa28.18■■■□□ 2.1
HOMER1-202ENST00000334082 PLPPR3Q6T4P5 718 aa28.17■■■□□ 2.1
HOMER1-202ENST00000334082 A0A0G2JS52 829 aa28.17■■■□□ 2.1
HOMER1-202ENST00000334082 B4GALNT3Q6L9W6 998 aa28.15■■■□□ 2.1
HOMER1-202ENST00000334082 PNNQ9H307 717 aaKnown RBP28.15■■■□□ 2.1
HOMER1-202ENST00000334082 CFAP53Q96M91 514 aa28.14■■■□□ 2.1
HOMER1-202ENST00000334082 ZBTB7CA1YPR0 619 aa28.13■■■□□ 2.09
HOMER1-202ENST00000334082 SCRIBQ14160 1630 aa28.13■■■□□ 2.09
HOMER1-202ENST00000334082 FGD1P98174 961 aa28.11■■■□□ 2.09
HOMER1-202ENST00000334082 RBM19Q9Y4C8 960 aaKnown RBP28.1■■■□□ 2.09
HOMER1-202ENST00000334082 SPRYD3Q8NCJ5 442 aa28.08■■■□□ 2.09
HOMER1-202ENST00000334082 NPM1P06748 294 aaKnown RBP eCLIP28.07■■■□□ 2.08
HOMER1-202ENST00000334082 FRAT1Q92837 279 aaPredicted RBP28.07■■■□□ 2.08
HOMER1-202ENST00000334082 KIAA2012Q0VF49 1180 aa28.06■■■□□ 2.08
HOMER1-202ENST00000334082 NAP1L2Q9ULW6 460 aaPredicted RBP28.03■■■□□ 2.08
HOMER1-202ENST00000334082 KCNJ4P48050 445 aa28.02■■■□□ 2.08
HOMER1-202ENST00000334082 CHMP4BQ9H444 224 aaKnown RBP28.02■■■□□ 2.08
HOMER1-202ENST00000334082 KNSTRNQ9Y448 316 aa28.01■■■□□ 2.07
HOMER1-202ENST00000334082 NEUROD2Q15784 382 aa28■■■□□ 2.07
HOMER1-202ENST00000334082 TSPY4P0CV99 314 aa27.99■■■□□ 2.07
HOMER1-202ENST00000334082 TSPY10P0CW01 314 aa27.99■■■□□ 2.07
HOMER1-202ENST00000334082 PTMSP20962 102 aa27.97■■■□□ 2.07
HOMER1-202ENST00000334082 C14orf37Q86TY3 774 aa27.97■■■□□ 2.07
HOMER1-202ENST00000334082 MS4A1P11836 297 aa27.96■■■□□ 2.07
HOMER1-202ENST00000334082 MAPK8IP3Q9UPT6 1336 aa27.95■■■□□ 2.06
HOMER1-202ENST00000334082 OS9Q13438 667 aaPredicted RBP27.93■■■□□ 2.06
HOMER1-202ENST00000334082 GBP4Q96PP9 640 aa27.92■■■□□ 2.06
HOMER1-202ENST00000334082 GZF1Q9H116 711 aaPredicted RBP27.92■■■□□ 2.06
HOMER1-202ENST00000334082 PLEKHG5O94827 1062 aa27.92■■■□□ 2.06
HOMER1-202ENST00000334082 MCCP23508 829 aa27.91■■■□□ 2.06
HOMER1-202ENST00000334082 CDCA8Q53HL2 280 aa27.9■■■□□ 2.06
HOMER1-202ENST00000334082 NOC3LQ8WTT2 800 aaKnown RBP27.87■■■□□ 2.05
HOMER1-202ENST00000334082 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
HOMER1-202ENST00000334082 HSP90AA2PQ14568 343 aaPredicted RBP27.86■■■□□ 2.05
HOMER1-202ENST00000334082 GOLGA6L3A6NEY3 463 aa27.85■■■□□ 2.05
HOMER1-202ENST00000334082 GOLGA6L1Q8N7Z2 621 aa27.85■■■□□ 2.05
HOMER1-202ENST00000334082 RRP7BPQ9NSQ0 103 aa27.85■■■□□ 2.05
HOMER1-202ENST00000334082 NUDCQ9Y266 331 aa27.81■■■□□ 2.04
HOMER1-202ENST00000334082 SENP3Q9H4L4 574 aaPredicted RBP27.81■■■□□ 2.04
HOMER1-202ENST00000334082 CLSTN1O94985 981 aa27.8■■■□□ 2.04
HOMER1-202ENST00000334082 CFAP44Q96MT7 982 aa27.79■■■□□ 2.04
HOMER1-202ENST00000334082 NCBP3Q53F19 620 aaKnown RBP27.78■■■□□ 2.04
HOMER1-202ENST00000334082 VSIG10Q8N0Z9 540 aa27.77■■■□□ 2.04
HOMER1-202ENST00000334082 CARD11Q9BXL7 1154 aa27.76■■■□□ 2.04
HOMER1-202ENST00000334082 RGL3Q3MIN7 710 aa27.76■■■□□ 2.03
HOMER1-202ENST00000334082 SYAP1Q96A49 352 aaPredicted RBP27.76■■■□□ 2.03
HOMER1-202ENST00000334082 SLKQ9H2G2 1235 aaPredicted RBP27.76■■■□□ 2.03
HOMER1-202ENST00000334082 RSPH6AQ9H0K4 717 aa27.75■■■□□ 2.03
HOMER1-202ENST00000334082 PPP1R15AO75807 674 aaPredicted RBP27.73■■■□□ 2.03
HOMER1-202ENST00000334082 GNL2Q13823 731 aaKnown RBP27.71■■■□□ 2.03
HOMER1-202ENST00000334082 CHMP7Q8WUX9 453 aaPredicted RBP27.7■■■□□ 2.03
HOMER1-202ENST00000334082 SETQ01105 290 aaPredicted RBP27.69■■■□□ 2.02
HOMER1-202ENST00000334082 A0A0U1RQG5 324 aaPredicted RBP27.69■■■□□ 2.02
HOMER1-202ENST00000334082 CC2D1BQ5T0F9 858 aaKnown RBP27.69■■■□□ 2.02
HOMER1-202ENST00000334082 ZCCHC6Q5VYS8 1495 aaKnown RBP27.68■■■□□ 2.02
HOMER1-202ENST00000334082 TPM4P67936 248 aa27.67■■■□□ 2.02
HOMER1-202ENST00000334082 HTATSF1O43719 755 aaKnown RBP27.64■■■□□ 2.01
HOMER1-202ENST00000334082 GOLGA2Q08379 1002 aa27.63■■■□□ 2.01
HOMER1-202ENST00000334082 IPO9Q96P70 1041 aaKnown RBP27.63■■■□□ 2.01
HOMER1-202ENST00000334082 TCERG1O14776 1098 aaKnown RBP27.62■■■□□ 2.01
HOMER1-202ENST00000334082 TSHZ2Q9NRE2 1034 aa27.61■■■□□ 2.01
HOMER1-202ENST00000334082 USP35Q9P2H5 1018 aa27.61■■■□□ 2.01
HOMER1-202ENST00000334082 CLIP1P30622 1438 aa27.61■■■□□ 2.01
HOMER1-202ENST00000334082 U2SURPO15042 1029 aaKnown RBP27.61■■■□□ 2.01
HOMER1-202ENST00000334082 CALRP27797 417 aaKnown RBP27.59■■■□□ 2.01
HOMER1-202ENST00000334082 CCDC180Q9P1Z9 1646 aa27.57■■■□□ 2
HOMER1-202ENST00000334082 KIAA1211Q6ZU35 1233 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms