RNA–Protein interactions for RNA: ENST00000329798.5

FREM3-201, Transcript of FRAS1 related extracellular matrix 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FREM3, Length 6,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3-201ENST00000329798 PDS5BQ9NTI5 1447 aa16.96■□□□□ 0.31
FREM3-201ENST00000329798 POGKQ9P215 609 aa16.95■□□□□ 0.3
FREM3-201ENST00000329798 RSF1Q96T23 1441 aaPredicted RBP16.92■□□□□ 0.3
FREM3-201ENST00000329798 HDGFP51858 240 aaKnown RBP16.92■□□□□ 0.3
FREM3-201ENST00000329798 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
FREM3-201ENST00000329798 DIEXFQ68CQ4 756 aaKnown RBP16.9■□□□□ 0.3
FREM3-201ENST00000329798 GGT6Q6P531 493 aa16.9■□□□□ 0.3
FREM3-201ENST00000329798 KIF27Q86VH2 1401 aa16.9■□□□□ 0.3
FREM3-201ENST00000329798 CCDC9Q9Y3X0 531 aaKnown RBP16.89■□□□□ 0.3
FREM3-201ENST00000329798 SALL2Q9Y467 1007 aaPredicted RBP16.89■□□□□ 0.3
FREM3-201ENST00000329798 WDR43Q15061 677 aaKnown RBP eCLIP16.85■□□□□ 0.29
FREM3-201ENST00000329798 WRNQ14191 1432 aaPredicted RBP eCLIP16.84■□□□□ 0.29
FREM3-201ENST00000329798 OSCARQ8IYS5 282 aa16.83■□□□□ 0.29
FREM3-201ENST00000329798 KANK1Q14678 1352 aa16.81■□□□□ 0.28
FREM3-201ENST00000329798 SOX12O15370 315 aa16.79■□□□□ 0.28
FREM3-201ENST00000329798 CARMIL2Q6F5E8 1435 aa16.78■□□□□ 0.28
FREM3-201ENST00000329798 CLIP1P30622 1438 aa16.78■□□□□ 0.28
FREM3-201ENST00000329798 CUX2O14529 1486 aa16.76■□□□□ 0.27
FREM3-201ENST00000329798 CCNB3Q8WWL7 1395 aa16.74■□□□□ 0.27
FREM3-201ENST00000329798 BAZ1AQ9NRL2 1556 aaPredicted RBP16.74■□□□□ 0.27
FREM3-201ENST00000329798 TDRD9Q8NDG6 1382 aaKnown RBP16.73■□□□□ 0.27
FREM3-201ENST00000329798 PAK3O75914 559 aaPredicted RBP16.73■□□□□ 0.27
FREM3-201ENST00000329798 PHF23Q9BUL5 403 aaPredicted RBP16.73■□□□□ 0.27
FREM3-201ENST00000329798 FAM9BQ8IZU0 186 aa16.71■□□□□ 0.27
FREM3-201ENST00000329798 SAFB2Q14151 953 aaKnown RBP eCLIP16.71■□□□□ 0.27
FREM3-201ENST00000329798 SOGA1O94964 1423 aa16.7■□□□□ 0.26
FREM3-201ENST00000329798 CSB-PGBD3P0DP91 1061 aa16.68■□□□□ 0.26
FREM3-201ENST00000329798 MEX3CQ5U5Q3 659 aaKnown RBP16.68■□□□□ 0.26
FREM3-201ENST00000329798 EID1Q9Y6B2 187 aa16.68■□□□□ 0.26
FREM3-201ENST00000329798 STK26Q9P289 416 aa16.67■□□□□ 0.26
FREM3-201ENST00000329798 CARMIL1Q5VZK9 1371 aa16.67■□□□□ 0.26
FREM3-201ENST00000329798 CFAP53Q96M91 514 aa16.65■□□□□ 0.26
FREM3-201ENST00000329798 SMARCA2P51531 1590 aa16.65■□□□□ 0.26
FREM3-201ENST00000329798 RTL5Q5HYW3 569 aaPredicted RBP16.63■□□□□ 0.25
FREM3-201ENST00000329798 SRPK2P78362 688 aaKnown RBP16.63■□□□□ 0.25
FREM3-201ENST00000329798 EFCAB2Q5VUJ9 269 aa16.63■□□□□ 0.25
FREM3-201ENST00000329798 GOLGA3Q08378 1498 aa16.62■□□□□ 0.25
FREM3-201ENST00000329798 MYH16Q9H6N6 1097 aa16.62■□□□□ 0.25
FREM3-201ENST00000329798 TNNT2P45379 298 aaPredicted RBP16.61■□□□□ 0.25
FREM3-201ENST00000329798 LAS1LQ9Y4W2 734 aaKnown RBP16.61■□□□□ 0.25
FREM3-201ENST00000329798 CDCA8Q53HL2 280 aa16.61■□□□□ 0.25
FREM3-201ENST00000329798 DDX10Q13206 875 aaKnown RBP16.59■□□□□ 0.25
FREM3-201ENST00000329798 HSP90AA1P07900 732 aaKnown RBP16.59■□□□□ 0.25
FREM3-201ENST00000329798 FAM69CQ0P6D2 419 aa16.59■□□□□ 0.25
FREM3-201ENST00000329798 CEP164Q9UPV0 1460 aa16.58■□□□□ 0.25
FREM3-201ENST00000329798 KNSTRNQ9Y448 316 aa16.57■□□□□ 0.24
FREM3-201ENST00000329798 HIRIP3Q9BW71 556 aaPredicted RBP16.57■□□□□ 0.24
FREM3-201ENST00000329798 CARD11Q9BXL7 1154 aa16.56■□□□□ 0.24
FREM3-201ENST00000329798 TULP1O00294 542 aaPredicted RBP16.55■□□□□ 0.24
FREM3-201ENST00000329798 GOLGA2Q08379 1002 aa16.54■□□□□ 0.24
FREM3-201ENST00000329798 KIF3BO15066 747 aa16.53■□□□□ 0.24
FREM3-201ENST00000329798 ZNF330Q9Y3S2 320 aaPredicted RBP16.53■□□□□ 0.24
FREM3-201ENST00000329798 MAPK8IP3Q9UPT6 1336 aa16.53■□□□□ 0.24
FREM3-201ENST00000329798 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.52■□□□□ 0.24
FREM3-201ENST00000329798 EEA1Q15075 1411 aa16.52■□□□□ 0.24
FREM3-201ENST00000329798 EIF4G2P78344 907 aaKnown RBP eCLIP16.52■□□□□ 0.24
FREM3-201ENST00000329798 JPH4Q96JJ6 628 aa16.52■□□□□ 0.24
FREM3-201ENST00000329798 TMX4Q9H1E5 349 aaPredicted RBP16.52■□□□□ 0.24
FREM3-201ENST00000329798 DCAF1Q9Y4B6 1507 aa16.51■□□□□ 0.23
FREM3-201ENST00000329798 WASHC2CQ9Y4E1 1318 aa16.51■□□□□ 0.23
FREM3-201ENST00000329798 HNRNPUQ00839 825 aaKnown RBP eCLIP16.51■□□□□ 0.23
FREM3-201ENST00000329798 NUTM2DQ5VT03 806 aaPredicted RBP16.5■□□□□ 0.23
FREM3-201ENST00000329798 NUDCQ9Y266 331 aa16.5■□□□□ 0.23
FREM3-201ENST00000329798 U2SURPO15042 1029 aaKnown RBP16.49■□□□□ 0.23
FREM3-201ENST00000329798 CADPSQ9ULU8 1353 aa16.49■□□□□ 0.23
FREM3-201ENST00000329798 ACIN1Q9UKV3 1341 aaKnown RBP16.49■□□□□ 0.23
FREM3-201ENST00000329798 NEUROD2Q15784 382 aa16.49■□□□□ 0.23
FREM3-201ENST00000329798 MRS2Q9HD23 443 aa16.47■□□□□ 0.23
FREM3-201ENST00000329798 DCAF8L1A6NGE4 600 aa16.47■□□□□ 0.23
FREM3-201ENST00000329798 MSH5O43196 834 aa16.46■□□□□ 0.23
FREM3-201ENST00000329798 DCAF11Q8TEB1 546 aa16.45■□□□□ 0.22
FREM3-201ENST00000329798 UPF2Q9HAU5 1272 aaKnown RBP16.45■□□□□ 0.22
FREM3-201ENST00000329798 NUTM2FA1L443 756 aa16.45■□□□□ 0.22
FREM3-201ENST00000329798 SPAG9O60271 1321 aaKnown RBP16.44■□□□□ 0.22
FREM3-201ENST00000329798 FHAD1B1AJZ9 1412 aa16.44■□□□□ 0.22
FREM3-201ENST00000329798 HNRNPMP52272 730 aaKnown RBP eCLIP16.42■□□□□ 0.22
FREM3-201ENST00000329798 NGDNQ8NEJ9 315 aaKnown RBP16.42■□□□□ 0.22
FREM3-201ENST00000329798 CEP162Q5TB80 1403 aa16.42■□□□□ 0.22
FREM3-201ENST00000329798 KLHL34Q8N239 644 aa16.42■□□□□ 0.22
FREM3-201ENST00000329798 CDK11BP21127 795 aaKnown RBP16.41■□□□□ 0.22
FREM3-201ENST00000329798 HDGFL2Q7Z4V5 671 aaPredicted RBP16.41■□□□□ 0.22
FREM3-201ENST00000329798 EVA1CP58658 441 aa16.4■□□□□ 0.22
FREM3-201ENST00000329798 ISY1Q9ULR0 285 aaKnown RBP16.39■□□□□ 0.21
FREM3-201ENST00000329798 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.21
FREM3-201ENST00000329798 SENP3-EIF4A1A0A087X0R7 540 aa16.38■□□□□ 0.21
FREM3-201ENST00000329798 OS9Q13438 667 aaPredicted RBP16.38■□□□□ 0.21
FREM3-201ENST00000329798 G3V3G9 751 aa16.37■□□□□ 0.21
FREM3-201ENST00000329798 DCAF8Q5TAQ9 597 aa16.37■□□□□ 0.21
FREM3-201ENST00000329798 RTF1Q92541 710 aaKnown RBP16.37■□□□□ 0.21
FREM3-201ENST00000329798 CCDC88BA6NC98 1476 aa16.36■□□□□ 0.21
FREM3-201ENST00000329798 FANCD2Q9BXW9 1451 aa16.36■□□□□ 0.21
FREM3-201ENST00000329798 PTPRGP23470 1445 aa16.35■□□□□ 0.21
FREM3-201ENST00000329798 CC2D1BQ5T0F9 858 aaKnown RBP16.35■□□□□ 0.21
FREM3-201ENST00000329798 TMF1P82094 1093 aa16.32■□□□□ 0.2
FREM3-201ENST00000329798 MROH2BQ7Z745 1585 aa16.32■□□□□ 0.2
FREM3-201ENST00000329798 PNNQ9H307 717 aaKnown RBP16.32■□□□□ 0.2
FREM3-201ENST00000329798 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.31■□□□□ 0.2
FREM3-201ENST00000329798 LTV1Q96GA3 475 aaPredicted RBP16.3■□□□□ 0.2
FREM3-201ENST00000329798 FTSJ3Q8IY81 847 aaKnown RBP16.3■□□□□ 0.2
FREM3-201ENST00000329798 PKD2Q13563 968 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms