RNA–Protein interactions for RNA: ENST00000329255.3

ALX4-201, Transcript of ALX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALX4, Length 5,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALX4-201ENST00000329255 PTMAP06454 111 aaKnown RBP17.89■□□□□ 0.46
ALX4-201ENST00000329255 TSPY4P0CV99 314 aa17.89■□□□□ 0.45
ALX4-201ENST00000329255 TSPY10P0CW01 314 aa17.89■□□□□ 0.45
ALX4-201ENST00000329255 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
ALX4-201ENST00000329255 PPM1GO15355 546 aaPredicted RBP17.87■□□□□ 0.45
ALX4-201ENST00000329255 ZRSR1Q15695 479 aaKnown RBP17.87■□□□□ 0.45
ALX4-201ENST00000329255 ERICH6BQ5W0A0 696 aa17.87■□□□□ 0.45
ALX4-201ENST00000329255 DNTTIP2Q5QJE6 756 aaKnown RBP17.83■□□□□ 0.45
ALX4-201ENST00000329255 CASC1Q6TDU7 716 aa17.82■□□□□ 0.44
ALX4-201ENST00000329255 MTUS2Q5JR59 1369 aa17.82■□□□□ 0.44
ALX4-201ENST00000329255 HIRIP3Q9BW71 556 aaPredicted RBP17.81■□□□□ 0.44
ALX4-201ENST00000329255 CFAP53Q96M91 514 aa17.76■□□□□ 0.43
ALX4-201ENST00000329255 NAP1L5Q96NT1 182 aaPredicted RBP17.76■□□□□ 0.43
ALX4-201ENST00000329255 A0A0G2JS52 829 aa17.73■□□□□ 0.43
ALX4-201ENST00000329255 FTSJ3Q8IY81 847 aaKnown RBP17.72■□□□□ 0.43
ALX4-201ENST00000329255 ZBTB7CA1YPR0 619 aa17.7■□□□□ 0.42
ALX4-201ENST00000329255 CDCA8Q53HL2 280 aa17.7■□□□□ 0.42
ALX4-201ENST00000329255 SUPT16HQ9Y5B9 1047 aaKnown RBP17.7■□□□□ 0.42
ALX4-201ENST00000329255 C14orf37Q86TY3 774 aa17.68■□□□□ 0.42
ALX4-201ENST00000329255 GOLGA6L6A8MZA4 724 aa17.68■□□□□ 0.42
ALX4-201ENST00000329255 PPP4R2Q9NY27 417 aa17.68■□□□□ 0.42
ALX4-201ENST00000329255 NOP58Q9Y2X3 529 aaKnown RBP17.67■□□□□ 0.42
ALX4-201ENST00000329255 KNSTRNQ9Y448 316 aa17.67■□□□□ 0.42
ALX4-201ENST00000329255 RRP7BPQ9NSQ0 103 aa17.67■□□□□ 0.42
ALX4-201ENST00000329255 LAS1LQ9Y4W2 734 aaKnown RBP17.67■□□□□ 0.42
ALX4-201ENST00000329255 CLIP1P30622 1438 aa17.66■□□□□ 0.42
ALX4-201ENST00000329255 TPRNQ4KMQ1 711 aa17.66■□□□□ 0.42
ALX4-201ENST00000329255 PPP1R15AO75807 674 aaPredicted RBP17.66■□□□□ 0.42
ALX4-201ENST00000329255 PLCB2Q00722 1185 aa17.63■□□□□ 0.41
ALX4-201ENST00000329255 RTN4Q9NQC3 1192 aaKnown RBP17.62■□□□□ 0.41
ALX4-201ENST00000329255 CHMP4BQ9H444 224 aaKnown RBP17.62■□□□□ 0.41
ALX4-201ENST00000329255 NRDCO43847 1150 aa17.62■□□□□ 0.41
ALX4-201ENST00000329255 HSP90AB1P08238 724 aaKnown RBP17.61■□□□□ 0.41
ALX4-201ENST00000329255 RSF1Q96T23 1441 aaPredicted RBP17.61■□□□□ 0.41
ALX4-201ENST00000329255 SCRIBQ14160 1630 aa17.61■□□□□ 0.41
ALX4-201ENST00000329255 MAPK8IP3Q9UPT6 1336 aa17.6■□□□□ 0.41
ALX4-201ENST00000329255 RGS3P49796 1198 aa17.6■□□□□ 0.41
ALX4-201ENST00000329255 MS4A1P11836 297 aa17.58■□□□□ 0.4
ALX4-201ENST00000329255 RGL3Q3MIN7 710 aa17.58■□□□□ 0.4
ALX4-201ENST00000329255 NUDCQ9Y266 331 aa17.57■□□□□ 0.4
ALX4-201ENST00000329255 PLEKHG5O94827 1062 aa17.57■□□□□ 0.4
ALX4-201ENST00000329255 CARD11Q9BXL7 1154 aa17.56■□□□□ 0.4
ALX4-201ENST00000329255 CHAF1AQ13111 956 aaPredicted RBP17.56■□□□□ 0.4
ALX4-201ENST00000329255 SENP3-EIF4A1A0A087X0R7 540 aa17.55■□□□□ 0.4
ALX4-201ENST00000329255 NEUROD2Q15784 382 aa17.54■□□□□ 0.4
ALX4-201ENST00000329255 L1TD1Q5T7N2 865 aaKnown RBP17.53■□□□□ 0.4
ALX4-201ENST00000329255 CHMP7Q8WUX9 453 aaPredicted RBP17.53■□□□□ 0.4
ALX4-201ENST00000329255 FRAT1Q92837 279 aaPredicted RBP17.53■□□□□ 0.4
ALX4-201ENST00000329255 SENP3Q9H4L4 574 aaPredicted RBP17.53■□□□□ 0.4
ALX4-201ENST00000329255 TULP1O00294 542 aaPredicted RBP17.52■□□□□ 0.4
ALX4-201ENST00000329255 FGD1P98174 961 aa17.52■□□□□ 0.4
ALX4-201ENST00000329255 HSCBQ8IWL3 235 aa17.51■□□□□ 0.39
ALX4-201ENST00000329255 MSNP26038 577 aaKnown RBP17.51■□□□□ 0.39
ALX4-201ENST00000329255 PLEKHD1A6NEE1 506 aa17.49■□□□□ 0.39
ALX4-201ENST00000329255 GOLGA6L4A6NEF3 574 aa17.49■□□□□ 0.39
ALX4-201ENST00000329255 HAP1P54257 671 aaPredicted RBP17.49■□□□□ 0.39
ALX4-201ENST00000329255 OS9Q13438 667 aaPredicted RBP17.49■□□□□ 0.39
ALX4-201ENST00000329255 KCNJ4P48050 445 aa17.48■□□□□ 0.39
ALX4-201ENST00000329255 GOLGA3Q08378 1498 aa17.48■□□□□ 0.39
ALX4-201ENST00000329255 ZCCHC6Q5VYS8 1495 aaKnown RBP17.47■□□□□ 0.39
ALX4-201ENST00000329255 EEA1Q15075 1411 aa17.46■□□□□ 0.39
ALX4-201ENST00000329255 PNNQ9H307 717 aaKnown RBP17.45■□□□□ 0.38
ALX4-201ENST00000329255 CEP162Q5TB80 1403 aa17.45■□□□□ 0.38
ALX4-201ENST00000329255 B4GALNT3Q6L9W6 998 aa17.44■□□□□ 0.38
ALX4-201ENST00000329255 TAOK2Q9UL54 1235 aa17.44■□□□□ 0.38
ALX4-201ENST00000329255 KCNH8Q96L42 1107 aa17.44■□□□□ 0.38
ALX4-201ENST00000329255 NAP1L2Q9ULW6 460 aaPredicted RBP17.43■□□□□ 0.38
ALX4-201ENST00000329255 CFAP44Q96MT7 982 aa17.43■□□□□ 0.38
ALX4-201ENST00000329255 MCCP23508 829 aa17.42■□□□□ 0.38
ALX4-201ENST00000329255 DEKP35659 375 aaKnown RBP17.42■□□□□ 0.38
ALX4-201ENST00000329255 CFDP1Q9UEE9 299 aaPredicted RBP17.41■□□□□ 0.38
ALX4-201ENST00000329255 CC2D1BQ5T0F9 858 aaKnown RBP17.39■□□□□ 0.37
ALX4-201ENST00000329255 DRC7Q8IY82 874 aa17.39■□□□□ 0.37
ALX4-201ENST00000329255 POGKQ9P215 609 aa17.39■□□□□ 0.37
ALX4-201ENST00000329255 CCDC180Q9P1Z9 1646 aa17.39■□□□□ 0.37
ALX4-201ENST00000329255 U2SURPO15042 1029 aaKnown RBP17.38■□□□□ 0.37
ALX4-201ENST00000329255 PTMSP20962 102 aa17.37■□□□□ 0.37
ALX4-201ENST00000329255 GOLGA2Q08379 1002 aa17.35■□□□□ 0.37
ALX4-201ENST00000329255 NPHP1O15259 732 aa17.34■□□□□ 0.37
ALX4-201ENST00000329255 TMF1P82094 1093 aa17.33■□□□□ 0.36
ALX4-201ENST00000329255 SIN3AQ96ST3 1273 aa17.33■□□□□ 0.36
ALX4-201ENST00000329255 SPRYD3Q8NCJ5 442 aa17.31■□□□□ 0.36
ALX4-201ENST00000329255 GBP4Q96PP9 640 aa17.31■□□□□ 0.36
ALX4-201ENST00000329255 CCER2I3L3R5 266 aa17.31■□□□□ 0.36
ALX4-201ENST00000329255 AMER1Q5JTC6 1135 aaPredicted RBP17.3■□□□□ 0.36
ALX4-201ENST00000329255 RBM19Q9Y4C8 960 aaKnown RBP17.3■□□□□ 0.36
ALX4-201ENST00000329255 ARID4BQ4LE39 1312 aaPredicted RBP17.3■□□□□ 0.36
ALX4-201ENST00000329255 KIAA2012Q0VF49 1180 aa17.3■□□□□ 0.36
ALX4-201ENST00000329255 LMOD2Q6P5Q4 547 aa17.3■□□□□ 0.36
ALX4-201ENST00000329255 TNIKQ9UKE5 1360 aa17.27■□□□□ 0.36
ALX4-201ENST00000329255 GNL2Q13823 731 aaKnown RBP17.26■□□□□ 0.35
ALX4-201ENST00000329255 TIMELESSQ9UNS1 1208 aa17.25■□□□□ 0.35
ALX4-201ENST00000329255 CEP164Q9UPV0 1460 aa17.24■□□□□ 0.35
ALX4-201ENST00000329255 CLSTN1O94985 981 aa17.24■□□□□ 0.35
ALX4-201ENST00000329255 KIAA1211Q6ZU35 1233 aa17.23■□□□□ 0.35
ALX4-201ENST00000329255 IPO8O15397 1037 aaKnown RBP17.23■□□□□ 0.35
ALX4-201ENST00000329255 HTATSF1O43719 755 aaKnown RBP17.23■□□□□ 0.35
ALX4-201ENST00000329255 SYAP1Q96A49 352 aaPredicted RBP17.23■□□□□ 0.35
ALX4-201ENST00000329255 MYO15BQ96JP2 1530 aa17.22■□□□□ 0.35
ALX4-201ENST00000329255 MORC1Q86VD1 984 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms