RNA–Protein interactions for RNA: ENST00000327628.9

TRAK1-201, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAK1, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-201ENST00000327628 FAM9BQ8IZU0 186 aa17.59■□□□□ 0.41
TRAK1-201ENST00000327628 BCL11AQ9H165 835 aa17.59■□□□□ 0.41
TRAK1-201ENST00000327628 MRS2Q9HD23 443 aa17.58■□□□□ 0.41
TRAK1-201ENST00000327628 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.57■□□□□ 0.42e-7■■□□□ 13.9
TRAK1-201ENST00000327628 KIF27Q86VH2 1401 aa17.56■□□□□ 0.4
TRAK1-201ENST00000327628 NCLP19338 710 aaKnown RBP17.56■□□□□ 0.4
TRAK1-201ENST00000327628 DDX10Q13206 875 aaKnown RBP17.56■□□□□ 0.4
TRAK1-201ENST00000327628 PPP1R15AO75807 674 aaPredicted RBP17.54■□□□□ 0.4
TRAK1-201ENST00000327628 CEP164Q9UPV0 1460 aa17.54■□□□□ 0.4
TRAK1-201ENST00000327628 GOLGA6L22H0YM25 854 aa17.54■□□□□ 0.4
TRAK1-201ENST00000327628 CASC1Q6TDU7 716 aa17.51■□□□□ 0.39
TRAK1-201ENST00000327628 BAZ1BQ9UIG0 1483 aaKnown RBP17.51■□□□□ 0.39
TRAK1-201ENST00000327628 CHIC2Q9UKJ5 165 aa17.5■□□□□ 0.39
TRAK1-201ENST00000327628 MS4A1P11836 297 aa17.5■□□□□ 0.39
TRAK1-201ENST00000327628 PNNQ9H307 717 aaKnown RBP17.49■□□□□ 0.39
TRAK1-201ENST00000327628 WRNQ14191 1432 aaPredicted RBP eCLIP17.48■□□□□ 0.39
TRAK1-201ENST00000327628 TNIKQ9UKE5 1360 aa17.46■□□□□ 0.39
TRAK1-201ENST00000327628 FHAD1B1AJZ9 1412 aa17.45■□□□□ 0.38
TRAK1-201ENST00000327628 NUDCQ9Y266 331 aa17.43■□□□□ 0.38
TRAK1-201ENST00000327628 CFAP44Q96MT7 982 aa17.43■□□□□ 0.38
TRAK1-201ENST00000327628 TIMELESSQ9UNS1 1208 aa17.43■□□□□ 0.38
TRAK1-201ENST00000327628 KDM2AQ9Y2K7 1162 aa17.42■□□□□ 0.38
TRAK1-201ENST00000327628 CEP162Q5TB80 1403 aa17.42■□□□□ 0.38
TRAK1-201ENST00000327628 KNSTRNQ9Y448 316 aa17.41■□□□□ 0.38
TRAK1-201ENST00000327628 HDGFP51858 240 aaKnown RBP17.41■□□□□ 0.38
TRAK1-201ENST00000327628 CFDP1Q9UEE9 299 aaPredicted RBP17.39■□□□□ 0.37
TRAK1-201ENST00000327628 BAZ1AQ9NRL2 1556 aaPredicted RBP17.38■□□□□ 0.37
TRAK1-201ENST00000327628 KANK1Q14678 1352 aa17.38■□□□□ 0.37
TRAK1-201ENST00000327628 HAP1P54257 671 aaPredicted RBP17.37■□□□□ 0.37
TRAK1-201ENST00000327628 ZRSR1Q15695 479 aaKnown RBP17.37■□□□□ 0.37
TRAK1-201ENST00000327628 MAPK8IP3Q9UPT6 1336 aa17.35■□□□□ 0.37
TRAK1-201ENST00000327628 PPM1GO15355 546 aaPredicted RBP17.33■□□□□ 0.36
TRAK1-201ENST00000327628 C14orf37Q86TY3 774 aa17.33■□□□□ 0.36
TRAK1-201ENST00000327628 SCAF1Q9H7N4 1312 aaKnown RBP17.32■□□□□ 0.36
TRAK1-201ENST00000327628 TRIM44Q96DX7 344 aaPredicted RBP17.32■□□□□ 0.36
TRAK1-201ENST00000327628 RRP7BPQ9NSQ0 103 aa17.3■□□□□ 0.36
TRAK1-201ENST00000327628 SALL2Q9Y467 1007 aaPredicted RBP17.29■□□□□ 0.36
TRAK1-201ENST00000327628 FTSJ3Q8IY81 847 aaKnown RBP17.28■□□□□ 0.36
TRAK1-201ENST00000327628 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
TRAK1-201ENST00000327628 GOLGA6L6A8MZA4 724 aa17.28■□□□□ 0.36
TRAK1-201ENST00000327628 CARD11Q9BXL7 1154 aa17.27■□□□□ 0.36
TRAK1-201ENST00000327628 ERCC6Q03468 1493 aa17.27■□□□□ 0.35
TRAK1-201ENST00000327628 PLPPR3Q6T4P5 718 aa17.27■□□□□ 0.35
TRAK1-201ENST00000327628 CHMP4AQ9BY43 222 aa17.27■□□□□ 0.35
TRAK1-201ENST00000327628 KCNH8Q96L42 1107 aa17.24■□□□□ 0.35
TRAK1-201ENST00000327628 NRDCO43847 1150 aa17.23■□□□□ 0.35
TRAK1-201ENST00000327628 ARID4BQ4LE39 1312 aaPredicted RBP17.22■□□□□ 0.35
TRAK1-201ENST00000327628 POGKQ9P215 609 aa17.22■□□□□ 0.35
TRAK1-201ENST00000327628 TNNT2P45379 298 aaPredicted RBP17.21■□□□□ 0.35
TRAK1-201ENST00000327628 TMF1P82094 1093 aa17.21■□□□□ 0.35
TRAK1-201ENST00000327628 CARMIL2Q6F5E8 1435 aa17.18■□□□□ 0.34
TRAK1-201ENST00000327628 PPP4R2Q9NY27 417 aa17.17■□□□□ 0.34
TRAK1-201ENST00000327628 PTMSP20962 102 aa17.16■□□□□ 0.34
TRAK1-201ENST00000327628 ZBTB7CA1YPR0 619 aa17.16■□□□□ 0.34
TRAK1-201ENST00000327628 ERICH6BQ5W0A0 696 aa17.15■□□□□ 0.34
TRAK1-201ENST00000327628 CALD1Q05682 793 aaKnown RBP17.15■□□□□ 0.34
TRAK1-201ENST00000327628 A0A0G2JS52 829 aa17.14■□□□□ 0.34
TRAK1-201ENST00000327628 PTMAP06454 111 aaKnown RBP17.14■□□□□ 0.33
TRAK1-201ENST00000327628 MIER1Q8N108 512 aa17.13■□□□□ 0.33
TRAK1-201ENST00000327628 L1TD1Q5T7N2 865 aaKnown RBP17.13■□□□□ 0.33
TRAK1-201ENST00000327628 MCCP23508 829 aa17.12■□□□□ 0.33
TRAK1-201ENST00000327628 RGL3Q3MIN7 710 aa17.12■□□□□ 0.33
TRAK1-201ENST00000327628 SMARCA2P51531 1590 aa17.11■□□□□ 0.33
TRAK1-201ENST00000327628 CCER2I3L3R5 266 aa17.11■□□□□ 0.33
TRAK1-201ENST00000327628 NBR1Q14596 966 aa17.11■□□□□ 0.33
TRAK1-201ENST00000327628 CARMIL1Q5VZK9 1371 aa17.11■□□□□ 0.33
TRAK1-201ENST00000327628 ARHGAP35Q9NRY4 1499 aa17.09■□□□□ 0.33
TRAK1-201ENST00000327628 HDAC5Q9UQL6 1122 aa17.08■□□□□ 0.33
TRAK1-201ENST00000327628 EIF3AQ14152 1382 aaKnown RBP17.07■□□□□ 0.32
TRAK1-201ENST00000327628 PDS5BQ9NTI5 1447 aa17.07■□□□□ 0.32
TRAK1-201ENST00000327628 FMN1Q68DA7 1419 aa17.07■□□□□ 0.32
TRAK1-201ENST00000327628 OS9Q13438 667 aaPredicted RBP17.05■□□□□ 0.32
TRAK1-201ENST00000327628 IPO8O15397 1037 aaKnown RBP17.04■□□□□ 0.32
TRAK1-201ENST00000327628 CUX2O14529 1486 aa17.03■□□□□ 0.32
TRAK1-201ENST00000327628 HDGFL2Q7Z4V5 671 aaPredicted RBP17.03■□□□□ 0.32
TRAK1-201ENST00000327628 SETD5Q9C0A6 1442 aa17.03■□□□□ 0.32
TRAK1-201ENST00000327628 RSPH4AQ5TD94 716 aa17.03■□□□□ 0.32
TRAK1-201ENST00000327628 GOLGA2Q08379 1002 aa17.02■□□□□ 0.31
TRAK1-201ENST00000327628 HSP90AB1P08238 724 aaKnown RBP17.02■□□□□ 0.31
TRAK1-201ENST00000327628 FGD1P98174 961 aa17.01■□□□□ 0.31
TRAK1-201ENST00000327628 NPHP1O15259 732 aa17.01■□□□□ 0.31
TRAK1-201ENST00000327628 HSCBQ8IWL3 235 aa17■□□□□ 0.31
TRAK1-201ENST00000327628 EIF4G1Q04637 1599 aaKnown RBP17■□□□□ 0.31
TRAK1-201ENST00000327628 KTN1Q86UP2 1357 aaKnown RBP17■□□□□ 0.31
TRAK1-201ENST00000327628 VPS8Q8N3P4 1428 aa17■□□□□ 0.31
TRAK1-201ENST00000327628 KCNJ4P48050 445 aa16.99■□□□□ 0.31
TRAK1-201ENST00000327628 HTATSF1O43719 755 aaKnown RBP16.98■□□□□ 0.31
TRAK1-201ENST00000327628 RALBP1Q15311 655 aa16.98■□□□□ 0.31
TRAK1-201ENST00000327628 DNTTIP2Q5QJE6 756 aaKnown RBP16.98■□□□□ 0.31
TRAK1-201ENST00000327628 ANKRD30AQ9BXX3 1397 aa16.97■□□□□ 0.31
TRAK1-201ENST00000327628 CHAF1AQ13111 956 aaPredicted RBP16.97■□□□□ 0.31
TRAK1-201ENST00000327628 GOLGA6L4A6NEF3 574 aa16.97■□□□□ 0.31
TRAK1-201ENST00000327628 RTF1Q92541 710 aaKnown RBP16.97■□□□□ 0.31
TRAK1-201ENST00000327628 MORC1Q86VD1 984 aa16.96■□□□□ 0.31
TRAK1-201ENST00000327628 LAS1LQ9Y4W2 734 aaKnown RBP16.96■□□□□ 0.31
TRAK1-201ENST00000327628 ARXQ96QS3 562 aa16.96■□□□□ 0.3
TRAK1-201ENST00000327628 ROCK2O75116 1388 aaKnown RBP16.95■□□□□ 0.3
TRAK1-201ENST00000327628 U2SURPO15042 1029 aaKnown RBP16.94■□□□□ 0.3
TRAK1-201ENST00000327628 EFCAB2Q5VUJ9 269 aa16.93■□□□□ 0.3
TRAK1-201ENST00000327628 PHLDB1Q86UU1 1377 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms