RNA–Protein interactions for RNA: ENST00000320476.7

SCRIB-201, Transcript of scribbled planar cell polarity protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCRIB, Length 5,143 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-201ENST00000320476 HSP90AA1P07900 732 aaKnown RBP24.45■■□□□ 1.5
SCRIB-201ENST00000320476 NBR1Q14596 966 aa24.44■■□□□ 1.5
SCRIB-201ENST00000320476 CEP164Q9UPV0 1460 aa24.43■■□□□ 1.5
SCRIB-201ENST00000320476 HIRIP3Q9BW71 556 aaPredicted RBP24.43■■□□□ 1.5
SCRIB-201ENST00000320476 TSPY4P0CV99 314 aa24.42■■□□□ 1.5
SCRIB-201ENST00000320476 TSPY10P0CW01 314 aa24.42■■□□□ 1.5
SCRIB-201ENST00000320476 WDR43Q15061 677 aaKnown RBP eCLIP24.42■■□□□ 1.5
SCRIB-201ENST00000320476 IRX6P78412 446 aaPredicted RBP24.41■■□□□ 1.5
SCRIB-201ENST00000320476 CHGAP10645 457 aaKnown RBP24.35■■□□□ 1.49
SCRIB-201ENST00000320476 KDM2AQ9Y2K7 1162 aa24.33■■□□□ 1.49
SCRIB-201ENST00000320476 RRP7BPQ9NSQ0 103 aa24.31■■□□□ 1.48
SCRIB-201ENST00000320476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.3■■□□□ 1.482e-6■■■□□ 15.6
SCRIB-201ENST00000320476 KIF27Q86VH2 1401 aa24.28■■□□□ 1.48
SCRIB-201ENST00000320476 BAZ1AQ9NRL2 1556 aaPredicted RBP24.25■■□□□ 1.47
SCRIB-201ENST00000320476 DDRGK1Q96HY6 314 aa24.25■■□□□ 1.47
SCRIB-201ENST00000320476 PLPPR3Q6T4P5 718 aa24.21■■□□□ 1.47
SCRIB-201ENST00000320476 STAG3Q9UJ98 1225 aa24.2■■□□□ 1.47
SCRIB-201ENST00000320476 SUPT16HQ9Y5B9 1047 aaKnown RBP24.19■■□□□ 1.46
SCRIB-201ENST00000320476 PPP4R2Q9NY27 417 aa24.13■■□□□ 1.45
SCRIB-201ENST00000320476 TIMELESSQ9UNS1 1208 aa24.12■■□□□ 1.45
SCRIB-201ENST00000320476 BECN1Q14457 450 aa24.12■■□□□ 1.45
SCRIB-201ENST00000320476 CCNB3Q8WWL7 1395 aa24.11■■□□□ 1.45
SCRIB-201ENST00000320476 CECR2Q9BXF3 1484 aa24.08■■□□□ 1.45
SCRIB-201ENST00000320476 SIN3AQ96ST3 1273 aa24.08■■□□□ 1.45
SCRIB-201ENST00000320476 PLEKHD1A6NEE1 506 aa24.04■■□□□ 1.44
SCRIB-201ENST00000320476 KCNH8Q96L42 1107 aa24.03■■□□□ 1.44
SCRIB-201ENST00000320476 MYH16Q9H6N6 1097 aa24.03■■□□□ 1.44
SCRIB-201ENST00000320476 CDCA8Q53HL2 280 aa24.03■■□□□ 1.44
SCRIB-201ENST00000320476 PPM1GO15355 546 aaPredicted RBP24.02■■□□□ 1.44
SCRIB-201ENST00000320476 FHAD1B1AJZ9 1412 aa24.02■■□□□ 1.44
SCRIB-201ENST00000320476 CCER2I3L3R5 266 aa24.01■■□□□ 1.43
SCRIB-201ENST00000320476 ARXQ96QS3 562 aa24■■□□□ 1.43
SCRIB-201ENST00000320476 CARD11Q9BXL7 1154 aa24■■□□□ 1.43
SCRIB-201ENST00000320476 SOGA1O94964 1423 aa23.99■■□□□ 1.43
SCRIB-201ENST00000320476 CFDP1Q9UEE9 299 aaPredicted RBP23.99■■□□□ 1.43
SCRIB-201ENST00000320476 VPS8Q8N3P4 1428 aa23.98■■□□□ 1.43
SCRIB-201ENST00000320476 KNSTRNQ9Y448 316 aa23.96■■□□□ 1.43
SCRIB-201ENST00000320476 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.43
SCRIB-201ENST00000320476 RGL3Q3MIN7 710 aa23.94■■□□□ 1.42
SCRIB-201ENST00000320476 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
SCRIB-201ENST00000320476 CFAP53Q96M91 514 aa23.91■■□□□ 1.42
SCRIB-201ENST00000320476 NOP58Q9Y2X3 529 aaKnown RBP23.91■■□□□ 1.42
SCRIB-201ENST00000320476 SETD5Q9C0A6 1442 aa23.88■■□□□ 1.41
SCRIB-201ENST00000320476 GOLGA6L22H0YM25 854 aa23.87■■□□□ 1.41
SCRIB-201ENST00000320476 TRIM44Q96DX7 344 aaPredicted RBP23.85■■□□□ 1.41
SCRIB-201ENST00000320476 CARMIL1Q5VZK9 1371 aa23.82■■□□□ 1.4
SCRIB-201ENST00000320476 DEKP35659 375 aaKnown RBP23.82■■□□□ 1.4
SCRIB-201ENST00000320476 TRHP20396 242 aaPredicted RBP23.81■■□□□ 1.4
SCRIB-201ENST00000320476 SENP3-EIF4A1A0A087X0R7 540 aa23.81■■□□□ 1.4
SCRIB-201ENST00000320476 ERICH6BQ5W0A0 696 aa23.81■■□□□ 1.4
SCRIB-201ENST00000320476 B4GALNT3Q6L9W6 998 aa23.81■■□□□ 1.4
SCRIB-201ENST00000320476 ARID4BQ4LE39 1312 aaPredicted RBP23.77■■□□□ 1.4
SCRIB-201ENST00000320476 NCLP19338 710 aaKnown RBP23.77■■□□□ 1.4
SCRIB-201ENST00000320476 FTSJ3Q8IY81 847 aaKnown RBP23.76■■□□□ 1.39
SCRIB-201ENST00000320476 RBM19Q9Y4C8 960 aaKnown RBP23.75■■□□□ 1.39
SCRIB-201ENST00000320476 MROH2BQ7Z745 1585 aa23.75■■□□□ 1.39
SCRIB-201ENST00000320476 CCDC88BA6NC98 1476 aa23.75■■□□□ 1.39
SCRIB-201ENST00000320476 CUX2O14529 1486 aa23.75■■□□□ 1.39
SCRIB-201ENST00000320476 LAS1LQ9Y4W2 734 aaKnown RBP23.74■■□□□ 1.39
SCRIB-201ENST00000320476 ARHGAP35Q9NRY4 1499 aa23.74■■□□□ 1.39
SCRIB-201ENST00000320476 RTN4Q9NQC3 1192 aaKnown RBP23.73■■□□□ 1.39
SCRIB-201ENST00000320476 HSPA5P11021 654 aaKnown RBP23.7■■□□□ 1.39
SCRIB-201ENST00000320476 KANK4Q5T7N3 995 aaPredicted RBP23.7■■□□□ 1.39
SCRIB-201ENST00000320476 ABCC8Q09428 1581 aa23.7■■□□□ 1.38
SCRIB-201ENST00000320476 RGS3P49796 1198 aa23.7■■□□□ 1.38
SCRIB-201ENST00000320476 NUDCQ9Y266 331 aa23.67■■□□□ 1.38
SCRIB-201ENST00000320476 RAB3GAP2Q9H2M9 1393 aa23.67■■□□□ 1.38
SCRIB-201ENST00000320476 MS4A1P11836 297 aa23.67■■□□□ 1.38
SCRIB-201ENST00000320476 CASC1Q6TDU7 716 aa23.67■■□□□ 1.38
SCRIB-201ENST00000320476 TMF1P82094 1093 aa23.67■■□□□ 1.38
SCRIB-201ENST00000320476 MAPK8IP3Q9UPT6 1336 aa23.66■■□□□ 1.38
SCRIB-201ENST00000320476 CC2D1BQ5T0F9 858 aaKnown RBP23.66■■□□□ 1.38
SCRIB-201ENST00000320476 PPP1R15AO75807 674 aaPredicted RBP23.64■■□□□ 1.38
SCRIB-201ENST00000320476 CHMP4BQ9H444 224 aaKnown RBP23.64■■□□□ 1.38
SCRIB-201ENST00000320476 NEUROD2Q15784 382 aa23.63■■□□□ 1.37
SCRIB-201ENST00000320476 CADPSQ9ULU8 1353 aa23.63■■□□□ 1.37
SCRIB-201ENST00000320476 TNNT2P45379 298 aaPredicted RBP23.62■■□□□ 1.37
SCRIB-201ENST00000320476 DCAF11Q8TEB1 546 aa23.62■■□□□ 1.37
SCRIB-201ENST00000320476 FRAT1Q92837 279 aaPredicted RBP23.61■■□□□ 1.37
SCRIB-201ENST00000320476 TSHZ2Q9NRE2 1034 aa23.6■■□□□ 1.37
SCRIB-201ENST00000320476 EIF4G1Q04637 1599 aaKnown RBP23.57■■□□□ 1.36
SCRIB-201ENST00000320476 TDRD9Q8NDG6 1382 aaKnown RBP23.55■■□□□ 1.36
SCRIB-201ENST00000320476 PTMAP06454 111 aaKnown RBP23.54■■□□□ 1.36
SCRIB-201ENST00000320476 ATAD2BQ9ULI0 1458 aa23.53■■□□□ 1.36
SCRIB-201ENST00000320476 KTN1Q86UP2 1357 aaKnown RBP23.52■■□□□ 1.36
SCRIB-201ENST00000320476 NAP1L5Q96NT1 182 aaPredicted RBP23.52■■□□□ 1.36
SCRIB-201ENST00000320476 FMN1Q68DA7 1419 aa23.52■■□□□ 1.36
SCRIB-201ENST00000320476 PNNQ9H307 717 aaKnown RBP23.51■■□□□ 1.35
SCRIB-201ENST00000320476 TOP2AP11388 1531 aaKnown RBP23.51■■□□□ 1.35
SCRIB-201ENST00000320476 RALBP1Q15311 655 aa23.49■■□□□ 1.35
SCRIB-201ENST00000320476 MPHOSPH9Q99550 1183 aa23.48■■□□□ 1.35
SCRIB-201ENST00000320476 CARMIL2Q6F5E8 1435 aa23.48■■□□□ 1.35
SCRIB-201ENST00000320476 HSP90AB1P08238 724 aaKnown RBP23.47■■□□□ 1.35
SCRIB-201ENST00000320476 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
SCRIB-201ENST00000320476 PKD2Q13563 968 aa23.47■■□□□ 1.35
SCRIB-201ENST00000320476 TCERG1O14776 1098 aaKnown RBP23.47■■□□□ 1.35
SCRIB-201ENST00000320476 RCAN3Q9UKA8 241 aa23.45■■□□□ 1.34
SCRIB-201ENST00000320476 POGKQ9P215 609 aa23.45■■□□□ 1.34
SCRIB-201ENST00000320476 L1TD1Q5T7N2 865 aaKnown RBP23.45■■□□□ 1.34
SCRIB-201ENST00000320476 C14orf37Q86TY3 774 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms