RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 FBLN2P98095 1184 aa9.61□□□□□ -0.87
SOX6-201ENST00000316399 TMC1Q8TDI8 760 aa9.61□□□□□ -0.87
SOX6-201ENST00000316399 ZNF777Q9ULD5 760 aaPredicted RBP9.6□□□□□ -0.87
SOX6-201ENST00000316399 P3H3Q8IVL6 736 aa9.59□□□□□ -0.87
SOX6-201ENST00000316399 DDX10Q13206 875 aaKnown RBP9.59□□□□□ -0.87
SOX6-201ENST00000316399 WDR43Q15061 677 aaKnown RBP eCLIP9.59□□□□□ -0.87
SOX6-201ENST00000316399 CECR2Q9BXF3 1484 aa9.58□□□□□ -0.88
SOX6-201ENST00000316399 CHMP4BQ9H444 224 aaKnown RBP9.58□□□□□ -0.88
SOX6-201ENST00000316399 MROH2BQ7Z745 1585 aa9.58□□□□□ -0.88
SOX6-201ENST00000316399 SCAF1Q9H7N4 1312 aaKnown RBP9.57□□□□□ -0.88
SOX6-201ENST00000316399 BECN1Q14457 450 aa9.57□□□□□ -0.88
SOX6-201ENST00000316399 SETD5Q9C0A6 1442 aa9.57□□□□□ -0.88
SOX6-201ENST00000316399 CCDC88BA6NC98 1476 aa9.57□□□□□ -0.88
SOX6-201ENST00000316399 MIER1Q8N108 512 aa9.56□□□□□ -0.88
SOX6-201ENST00000316399 CNGB1Q14028 1251 aaPredicted RBP9.56□□□□□ -0.88
SOX6-201ENST00000316399 PLEKHD1A6NEE1 506 aa9.55□□□□□ -0.88
SOX6-201ENST00000316399 NPM1P06748 294 aaKnown RBP eCLIP9.55□□□□□ -0.88
SOX6-201ENST00000316399 HSP90AA1P07900 732 aaKnown RBP9.55□□□□□ -0.88
SOX6-201ENST00000316399 CARMIL1Q5VZK9 1371 aa9.55□□□□□ -0.88
SOX6-201ENST00000316399 MYH16Q9H6N6 1097 aa9.54□□□□□ -0.88
SOX6-201ENST00000316399 PPM1GO15355 546 aaPredicted RBP9.54□□□□□ -0.88
SOX6-201ENST00000316399 SMARCA4P51532 1647 aa9.53□□□□□ -0.88
SOX6-201ENST00000316399 ESF1Q9H501 851 aaKnown RBP9.53□□□□□ -0.88
SOX6-201ENST00000316399 MS4A1P11836 297 aa9.53□□□□□ -0.88
SOX6-201ENST00000316399 CHMP7Q8WUX9 453 aaPredicted RBP9.53□□□□□ -0.88
SOX6-201ENST00000316399 CUX2O14529 1486 aa9.53□□□□□ -0.88
SOX6-201ENST00000316399 ROCK2O75116 1388 aaKnown RBP9.52□□□□□ -0.89
SOX6-201ENST00000316399 FAM9BQ8IZU0 186 aa9.51□□□□□ -0.89
SOX6-201ENST00000316399 CFAP53Q96M91 514 aa9.51□□□□□ -0.89
SOX6-201ENST00000316399 PPP4R2Q9NY27 417 aa9.51□□□□□ -0.89
SOX6-201ENST00000316399 ABCC8Q09428 1581 aa9.51□□□□□ -0.89
SOX6-201ENST00000316399 CFDP1Q9UEE9 299 aaPredicted RBP9.5□□□□□ -0.89
SOX6-201ENST00000316399 PDS5BQ9NTI5 1447 aa9.5□□□□□ -0.89
SOX6-201ENST00000316399 SOGA1O94964 1423 aa9.49□□□□□ -0.89
SOX6-201ENST00000316399 CFAP44Q96MT7 982 aa9.49□□□□□ -0.89
SOX6-201ENST00000316399 GOLGA6L22H0YM25 854 aa9.49□□□□□ -0.89
SOX6-201ENST00000316399 RAPGEF2Q9Y4G8 1499 aa9.48□□□□□ -0.89
SOX6-201ENST00000316399 KNSTRNQ9Y448 316 aa9.47□□□□□ -0.89
SOX6-201ENST00000316399 CARMIL2Q6F5E8 1435 aa9.47□□□□□ -0.89
SOX6-201ENST00000316399 KANK1Q14678 1352 aa9.46□□□□□ -0.89
SOX6-201ENST00000316399 CHIC2Q9UKJ5 165 aa9.46□□□□□ -0.9
SOX6-201ENST00000316399 CCDC18Q5T9S5 1454 aa9.46□□□□□ -0.9
SOX6-201ENST00000316399 HAP1P54257 671 aaPredicted RBP9.45□□□□□ -0.9
SOX6-201ENST00000316399 EIF3AQ14152 1382 aaKnown RBP9.45□□□□□ -0.9
SOX6-201ENST00000316399 PHLDB1Q86UU1 1377 aa9.45□□□□□ -0.9
SOX6-201ENST00000316399 NPM2Q86SE8 214 aaKnown RBP9.45□□□□□ -0.9
SOX6-201ENST00000316399 ERICH3Q5RHP9 1530 aa9.44□□□□□ -0.9
SOX6-201ENST00000316399 CUX1P39880 1505 aa9.43□□□□□ -0.9
SOX6-201ENST00000316399 PNNQ9H307 717 aaKnown RBP9.43□□□□□ -0.9
SOX6-201ENST00000316399 STAG3Q9UJ98 1225 aa9.43□□□□□ -0.9
SOX6-201ENST00000316399 ARID3CA6NKF2 412 aa9.42□□□□□ -0.9
SOX6-201ENST00000316399 RALBP1Q15311 655 aa9.42□□□□□ -0.9
SOX6-201ENST00000316399 CASC1Q6TDU7 716 aa9.42□□□□□ -0.9
SOX6-201ENST00000316399 CARD11Q9BXL7 1154 aa9.42□□□□□ -0.9
SOX6-201ENST00000316399 KIF21BO75037 1637 aa9.41□□□□□ -0.9
SOX6-201ENST00000316399 RSPH4AQ5TD94 716 aa9.41□□□□□ -0.9
SOX6-201ENST00000316399 ANKRD30AQ9BXX3 1397 aa9.41□□□□□ -0.9
SOX6-201ENST00000316399 RRP7BPQ9NSQ0 103 aa9.41□□□□□ -0.9
SOX6-201ENST00000316399 PTMSP20962 102 aa9.4□□□□□ -0.9
SOX6-201ENST00000316399 KTN1Q86UP2 1357 aaKnown RBP9.4□□□□□ -0.9
SOX6-201ENST00000316399 CADPSQ9ULU8 1353 aa9.4□□□□□ -0.9
SOX6-201ENST00000316399 WIZO95785 1651 aa9.4□□□□□ -0.9
SOX6-201ENST00000316399 ATAD2BQ9ULI0 1458 aa9.4□□□□□ -0.9
SOX6-201ENST00000316399 NUDCQ9Y266 331 aa9.4□□□□□ -0.91
SOX6-201ENST00000316399 SUPT16HQ9Y5B9 1047 aaKnown RBP9.39□□□□□ -0.91
SOX6-201ENST00000316399 RAB3GAP2Q9H2M9 1393 aa9.38□□□□□ -0.91
SOX6-201ENST00000316399 PDE3BQ13370 1112 aa9.38□□□□□ -0.91
SOX6-201ENST00000316399 NCLP19338 710 aaKnown RBP9.37□□□□□ -0.91
SOX6-201ENST00000316399 TMF1P82094 1093 aa9.37□□□□□ -0.91
SOX6-201ENST00000316399 ERCC6Q03468 1493 aa9.37□□□□□ -0.91
SOX6-201ENST00000316399 NOP58Q9Y2X3 529 aaKnown RBP9.37□□□□□ -0.91
SOX6-201ENST00000316399 EIF4G1Q04637 1599 aaKnown RBP9.36□□□□□ -0.91
SOX6-201ENST00000316399 NGEFQ8N5V2 710 aa9.36□□□□□ -0.91
SOX6-201ENST00000316399 CHMP4AQ9BY43 222 aa9.35□□□□□ -0.91
SOX6-201ENST00000316399 MAPK8IP3Q9UPT6 1336 aa9.35□□□□□ -0.91
SOX6-201ENST00000316399 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.34□□□□□ -0.91
SOX6-201ENST00000316399 EFCAB5A4FU69 1503 aa9.33□□□□□ -0.92
SOX6-201ENST00000316399 CHGAP10645 457 aaKnown RBP9.33□□□□□ -0.92
SOX6-201ENST00000316399 TRIM44Q96DX7 344 aaPredicted RBP9.33□□□□□ -0.92
SOX6-201ENST00000316399 FTSJ3Q8IY81 847 aaKnown RBP9.33□□□□□ -0.92
SOX6-201ENST00000316399 UACAQ9BZF9 1416 aa9.33□□□□□ -0.92
SOX6-201ENST00000316399 L1TD1Q5T7N2 865 aaKnown RBP9.32□□□□□ -0.92
SOX6-201ENST00000316399 STAC3Q96MF2 364 aa9.32□□□□□ -0.92
SOX6-201ENST00000316399 CALD1Q05682 793 aaKnown RBP9.32□□□□□ -0.92
SOX6-201ENST00000316399 TCERG1O14776 1098 aaKnown RBP9.32□□□□□ -0.92
SOX6-201ENST00000316399 KDM2AQ9Y2K7 1162 aa9.31□□□□□ -0.92
SOX6-201ENST00000316399 DHX57Q6P158 1386 aaKnown RBP9.31□□□□□ -0.92
SOX6-201ENST00000316399 PPP1R15AO75807 674 aaPredicted RBP9.31□□□□□ -0.92
SOX6-201ENST00000316399 HDGFP51858 240 aaKnown RBP9.3□□□□□ -0.92
SOX6-201ENST00000316399 NCAPD3P42695 1498 aa9.3□□□□□ -0.92
SOX6-201ENST00000316399 HMGXB3Q12766 1538 aa9.29□□□□□ -0.92
SOX6-201ENST00000316399 USP35Q9P2H5 1018 aa9.29□□□□□ -0.92
SOX6-201ENST00000316399 FYCO1Q9BQS8 1478 aa9.29□□□□□ -0.92
SOX6-201ENST00000316399 KIF15Q9NS87 1388 aa9.28□□□□□ -0.92
SOX6-201ENST00000316399 AAMPQ13685 434 aa9.28□□□□□ -0.92
SOX6-201ENST00000316399 MYOM3Q5VTT5 1437 aa9.27□□□□□ -0.92
SOX6-201ENST00000316399 GOLGA6L6A8MZA4 724 aa9.27□□□□□ -0.92
SOX6-201ENST00000316399 IPO8O15397 1037 aaKnown RBP9.27□□□□□ -0.93
SOX6-201ENST00000316399 NBR1Q14596 966 aa9.27□□□□□ -0.93
SOX6-201ENST00000316399 NLRP13Q86W25 1043 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms