RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 HSP90AA1P07900 732 aaKnown RBP12.69□□□□□ -0.38
BDNF-201ENST00000314915 ZBTB47Q9UFB7 747 aaPredicted RBP12.69□□□□□ -0.38
BDNF-201ENST00000314915 BRPF3Q9ULD4 1205 aa12.69□□□□□ -0.38
BDNF-201ENST00000314915 PAK3O75914 559 aaPredicted RBP12.68□□□□□ -0.38
BDNF-201ENST00000314915 ANP32AP39687 249 aaKnown RBP12.67□□□□□ -0.38
BDNF-201ENST00000314915 CHMP4AQ9BY43 222 aa12.67□□□□□ -0.38
BDNF-201ENST00000314915 TULP1O00294 542 aaPredicted RBP12.66□□□□□ -0.38
BDNF-201ENST00000314915 CALD1Q05682 793 aaKnown RBP12.66□□□□□ -0.38
BDNF-201ENST00000314915 IPO9Q96P70 1041 aaKnown RBP12.65□□□□□ -0.38
BDNF-201ENST00000314915 IPO4Q8TEX9 1081 aaKnown RBP12.64□□□□□ -0.39
BDNF-201ENST00000314915 BBXQ8WY36 941 aaPredicted RBP12.64□□□□□ -0.39
BDNF-201ENST00000314915 NCLP19338 710 aaKnown RBP12.63□□□□□ -0.39
BDNF-201ENST00000314915 DHX37Q8IY37 1157 aaKnown RBP12.62□□□□□ -0.39
BDNF-201ENST00000314915 PLPPR3Q6T4P5 718 aa12.61□□□□□ -0.39
BDNF-201ENST00000314915 PPM1GO15355 546 aaPredicted RBP12.6□□□□□ -0.39
BDNF-201ENST00000314915 CANXP27824 592 aaKnown RBP12.6□□□□□ -0.39
BDNF-201ENST00000314915 NPM2Q86SE8 214 aaKnown RBP12.6□□□□□ -0.39
BDNF-201ENST00000314915 GSE1Q14687 1217 aa12.59□□□□□ -0.39
BDNF-201ENST00000314915 CENPJQ9HC77 1338 aaPredicted RBP12.59□□□□□ -0.39
BDNF-201ENST00000314915 CNGB1Q14028 1251 aaPredicted RBP12.59□□□□□ -0.39
BDNF-201ENST00000314915 PRDM4Q9UKN5 801 aa12.57□□□□□ -0.4
BDNF-201ENST00000314915 CHMP4BQ9H444 224 aaKnown RBP12.56□□□□□ -0.4
BDNF-201ENST00000314915 BCCIPQ9P287 314 aaKnown RBP eCLIP12.53□□□□□ -0.4
BDNF-201ENST00000314915 GTF2E1P29083 439 aaPredicted RBP12.52□□□□□ -0.41
BDNF-201ENST00000314915 PPP4R2Q9NY27 417 aa12.51□□□□□ -0.41
BDNF-201ENST00000314915 SAMD1Q6SPF0 538 aaPredicted RBP12.51□□□□□ -0.41
BDNF-201ENST00000314915 PDCL3Q9H2J4 239 aa12.5□□□□□ -0.41
BDNF-201ENST00000314915 HAP1P54257 671 aaPredicted RBP12.49□□□□□ -0.41
BDNF-201ENST00000314915 RGS3P49796 1198 aa12.48□□□□□ -0.41
BDNF-201ENST00000314915 FTSJ3Q8IY81 847 aaKnown RBP12.48□□□□□ -0.41
BDNF-201ENST00000314915 STAC3Q96MF2 364 aa12.48□□□□□ -0.41
BDNF-201ENST00000314915 TEX2Q8IWB9 1127 aa12.47□□□□□ -0.41
BDNF-201ENST00000314915 PNNQ9H307 717 aaKnown RBP12.46□□□□□ -0.41
BDNF-201ENST00000314915 C14orf37Q86TY3 774 aa12.46□□□□□ -0.42
BDNF-201ENST00000314915 ARID4BQ4LE39 1312 aaPredicted RBP12.44□□□□□ -0.42
BDNF-201ENST00000314915 HSP90B1P14625 803 aaKnown RBP12.44□□□□□ -0.42
BDNF-201ENST00000314915 ZFP91Q96JP5 570 aaPredicted RBP12.44□□□□□ -0.42
BDNF-201ENST00000314915 CNKSR2Q8WXI2 1034 aa12.43□□□□□ -0.42
BDNF-201ENST00000314915 CHRM1P11229 460 aaPredicted RBP12.4□□□□□ -0.43
BDNF-201ENST00000314915 FRAT1Q92837 279 aaPredicted RBP12.38□□□□□ -0.43
BDNF-201ENST00000314915 CDK11BP21127 795 aaKnown RBP12.38□□□□□ -0.43
BDNF-201ENST00000314915 FBXO3Q9UK99 471 aa12.37□□□□□ -0.43
BDNF-201ENST00000314915 TPM2P07951 284 aa12.36□□□□□ -0.43
BDNF-201ENST00000314915 LAS1LQ9Y4W2 734 aaKnown RBP12.36□□□□□ -0.43
BDNF-201ENST00000314915 CLCN1P35523 988 aa12.35□□□□□ -0.43
BDNF-201ENST00000314915 SMAP1Q8IYB5 467 aaPredicted RBP12.35□□□□□ -0.43
BDNF-201ENST00000314915 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
BDNF-201ENST00000314915 MAP7D2Q96T17 732 aa12.34□□□□□ -0.43
BDNF-201ENST00000314915 RRAGDQ9NQL2 400 aaPredicted RBP12.34□□□□□ -0.43
BDNF-201ENST00000314915 SECISBP2LQ93073 1101 aaKnown RBP12.34□□□□□ -0.43
BDNF-201ENST00000314915 CCER2I3L3R5 266 aa12.33□□□□□ -0.44
BDNF-201ENST00000314915 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
BDNF-201ENST00000314915 VGFO15240 615 aaPredicted RBP12.31□□□□□ -0.44
BDNF-201ENST00000314915 EEA1Q15075 1411 aa12.31□□□□□ -0.44
BDNF-201ENST00000314915 TNNT2P45379 298 aaPredicted RBP12.3□□□□□ -0.44
BDNF-201ENST00000314915 L1TD1Q5T7N2 865 aaKnown RBP12.29□□□□□ -0.44
BDNF-201ENST00000314915 TRIM52Q96A61 297 aa12.28□□□□□ -0.44
BDNF-201ENST00000314915 UTP14CQ5TAP6 766 aaKnown RBP12.28□□□□□ -0.44
BDNF-201ENST00000314915 ANP32BQ92688 251 aaKnown RBP12.27□□□□□ -0.44
BDNF-201ENST00000314915 DCAF11Q8TEB1 546 aa12.27□□□□□ -0.45
BDNF-201ENST00000314915 NFKBIBQ15653 356 aa12.26□□□□□ -0.45
BDNF-201ENST00000314915 DDRGK1Q96HY6 314 aa12.26□□□□□ -0.45
BDNF-201ENST00000314915 IRX6P78412 446 aaPredicted RBP12.24□□□□□ -0.45
BDNF-201ENST00000314915 ZCCHC6Q5VYS8 1495 aaKnown RBP12.24□□□□□ -0.45
BDNF-201ENST00000314915 TMEM51Q9NW97 253 aa12.23□□□□□ -0.45
BDNF-201ENST00000314915 RNF216Q9NWF9 866 aaPredicted RBP12.23□□□□□ -0.45
BDNF-201ENST00000314915 PLCD3Q8N3E9 789 aa12.23□□□□□ -0.45
BDNF-201ENST00000314915 B4GALNT3Q6L9W6 998 aa12.22□□□□□ -0.45
BDNF-201ENST00000314915 ZNF830Q96NB3 372 aaPredicted RBP12.22□□□□□ -0.45
BDNF-201ENST00000314915 WRNQ14191 1432 aaPredicted RBP eCLIP12.22□□□□□ -0.45
BDNF-201ENST00000314915 HNRNPUL2Q1KMD3 747 aaKnown RBP12.22□□□□□ -0.45
BDNF-201ENST00000314915 TAF3Q5VWG9 929 aa12.21□□□□□ -0.45
BDNF-201ENST00000314915 MTERF4Q7Z6M4 381 aaKnown RBP12.21□□□□□ -0.46
BDNF-201ENST00000314915 IRX3P78415 501 aaPredicted RBP12.2□□□□□ -0.46
BDNF-201ENST00000314915 TAOK2Q9UL54 1235 aa12.19□□□□□ -0.46
BDNF-201ENST00000314915 CLGNO14967 610 aa12.18□□□□□ -0.46
BDNF-201ENST00000314915 PPP4R3BQ5MIZ7 849 aa12.18□□□□□ -0.46
BDNF-201ENST00000314915 CNPY4Q8N129 248 aa12.18□□□□□ -0.46
BDNF-201ENST00000314915 ZHX1Q9UKY1 873 aaPredicted RBP12.18□□□□□ -0.46
BDNF-201ENST00000314915 KIF20AO95235 890 aa12.18□□□□□ -0.46
BDNF-201ENST00000314915 RGS22Q8NE09 1264 aa12.17□□□□□ -0.46
BDNF-201ENST00000314915 PTMSP20962 102 aa12.16□□□□□ -0.46
BDNF-201ENST00000314915 DMTNQ08495 405 aa12.16□□□□□ -0.46
BDNF-201ENST00000314915 ANP32CO43423 234 aa12.15□□□□□ -0.46
BDNF-201ENST00000314915 FOXD1Q16676 465 aa12.15□□□□□ -0.47
BDNF-201ENST00000314915 POLR3GLQ9BT43 218 aa12.14□□□□□ -0.47
BDNF-201ENST00000314915 PTMAP06454 111 aaKnown RBP12.14□□□□□ -0.47
BDNF-201ENST00000314915 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.13□□□□□ -0.47
BDNF-201ENST00000314915 TRIM44Q96DX7 344 aaPredicted RBP12.13□□□□□ -0.47
BDNF-201ENST00000314915 WWC1Q8IX03 1113 aa12.13□□□□□ -0.47
BDNF-201ENST00000314915 TERF1P54274 439 aa12.11□□□□□ -0.47
BDNF-201ENST00000314915 VGLL3A8MV65 326 aa12.11□□□□□ -0.47
BDNF-201ENST00000314915 DNTTIP2Q5QJE6 756 aaKnown RBP12.11□□□□□ -0.47
BDNF-201ENST00000314915 ABCC9O60706 1549 aa12.11□□□□□ -0.47
BDNF-201ENST00000314915 AXDND1Q5T1B0 1012 aaPredicted RBP12.1□□□□□ -0.47
BDNF-201ENST00000314915 GTPBP4Q9BZE4 634 aaKnown RBP12.1□□□□□ -0.47
BDNF-201ENST00000314915 LETM1O95202 739 aaPredicted RBP12.09□□□□□ -0.47
BDNF-201ENST00000314915 TCERG1O14776 1098 aaKnown RBP12.09□□□□□ -0.47
BDNF-201ENST00000314915 MMP14P50281 582 aa12.08□□□□□ -0.48
BDNF-201ENST00000314915 HNRNPUQ00839 825 aaKnown RBP eCLIP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms