RNA–Protein interactions for RNA: ENST00000312841.9

HR-201, Transcript of HR, lysine demethylase and nuclear receptor corepressor, humanhuman

TSL 5 BASIC

Gene HR, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HR-201ENST00000312841 CARMIL1Q5VZK9 1371 aa23.77■■□□□ 1.4
HR-201ENST00000312841 DDX10Q13206 875 aaKnown RBP23.76■■□□□ 1.39
HR-201ENST00000312841 TOP2AP11388 1531 aaKnown RBP23.76■■□□□ 1.39
HR-201ENST00000312841 CUX2O14529 1486 aa23.75■■□□□ 1.39
HR-201ENST00000312841 HNRNPUQ00839 825 aaKnown RBP eCLIP23.73■■□□□ 1.39
HR-201ENST00000312841 MROH2BQ7Z745 1585 aa23.73■■□□□ 1.39
HR-201ENST00000312841 CCDC88BA6NC98 1476 aa23.73■■□□□ 1.39
HR-201ENST00000312841 RRP7BPQ9NSQ0 103 aa23.71■■□□□ 1.39
HR-201ENST00000312841 KCNH8Q96L42 1107 aa23.69■■□□□ 1.38
HR-201ENST00000312841 BCL11AQ9H165 835 aa23.68■■□□□ 1.38
HR-201ENST00000312841 UPF2Q9HAU5 1272 aaKnown RBP23.68■■□□□ 1.38
HR-201ENST00000312841 KDM2AQ9Y2K7 1162 aa23.67■■□□□ 1.38
HR-201ENST00000312841 CCNB3Q8WWL7 1395 aa23.66■■□□□ 1.38
HR-201ENST00000312841 FAM9BQ8IZU0 186 aa23.65■■□□□ 1.38
HR-201ENST00000312841 PPP1R15AO75807 674 aaPredicted RBP23.63■■□□□ 1.37
HR-201ENST00000312841 CARMIL2Q6F5E8 1435 aa23.62■■□□□ 1.37
HR-201ENST00000312841 MRS2Q9HD23 443 aa23.61■■□□□ 1.37
HR-201ENST00000312841 TIMELESSQ9UNS1 1208 aa23.6■■□□□ 1.37
HR-201ENST00000312841 EIF4G1Q04637 1599 aaKnown RBP23.59■■□□□ 1.37
HR-201ENST00000312841 FKBP8Q14318 412 aa23.55■■□□□ 1.36
HR-201ENST00000312841 KANK1Q14678 1352 aa23.54■■□□□ 1.36
HR-201ENST00000312841 ANP32BQ92688 251 aaKnown RBP23.54■■□□□ 1.36
HR-201ENST00000312841 VPS8Q8N3P4 1428 aa23.53■■□□□ 1.36
HR-201ENST00000312841 FMN1Q68DA7 1419 aa23.53■■□□□ 1.36
HR-201ENST00000312841 CFAP53Q96M91 514 aa23.52■■□□□ 1.36
HR-201ENST00000312841 SOGA1O94964 1423 aa23.52■■□□□ 1.36
HR-201ENST00000312841 ARHGAP35Q9NRY4 1499 aa23.5■■□□□ 1.35
HR-201ENST00000312841 PLPPR3Q6T4P5 718 aa23.48■■□□□ 1.35
HR-201ENST00000312841 CADPSQ9ULU8 1353 aa23.47■■□□□ 1.35
HR-201ENST00000312841 HSP90AA1P07900 732 aaKnown RBP23.46■■□□□ 1.35
HR-201ENST00000312841 ABCC8Q09428 1581 aa23.45■■□□□ 1.35
HR-201ENST00000312841 CCDC136Q96JN2 1154 aa23.44■■□□□ 1.34
HR-201ENST00000312841 MYH16Q9H6N6 1097 aa23.44■■□□□ 1.34
HR-201ENST00000312841 SMARCA4P51532 1647 aa23.43■■□□□ 1.34
HR-201ENST00000312841 KNSTRNQ9Y448 316 aa23.42■■□□□ 1.34
HR-201ENST00000312841 CARD11Q9BXL7 1154 aa23.41■■□□□ 1.34
HR-201ENST00000312841 HDGFP51858 240 aaKnown RBP23.41■■□□□ 1.34
HR-201ENST00000312841 EIF5BO60841 1220 aaKnown RBP23.4■■□□□ 1.34
HR-201ENST00000312841 ATAD2BQ9ULI0 1458 aa23.39■■□□□ 1.34
HR-201ENST00000312841 WIZO95785 1651 aa23.39■■□□□ 1.33
HR-201ENST00000312841 ARID4BQ4LE39 1312 aaPredicted RBP23.39■■□□□ 1.33
HR-201ENST00000312841 NPM2Q86SE8 214 aaKnown RBP23.36■■□□□ 1.33
HR-201ENST00000312841 RAPGEF2Q9Y4G8 1499 aa23.35■■□□□ 1.33
HR-201ENST00000312841 SETD5Q9C0A6 1442 aa23.35■■□□□ 1.33
HR-201ENST00000312841 RGL3Q3MIN7 710 aa23.34■■□□□ 1.33
HR-201ENST00000312841 PNNQ9H307 717 aaKnown RBP23.29■■□□□ 1.32
HR-201ENST00000312841 MIER1Q8N108 512 aa23.29■■□□□ 1.32
HR-201ENST00000312841 NUDCQ9Y266 331 aa23.29■■□□□ 1.32
HR-201ENST00000312841 SALL2Q9Y467 1007 aaPredicted RBP23.29■■□□□ 1.32
HR-201ENST00000312841 C14orf37Q86TY3 774 aa23.28■■□□□ 1.32
HR-201ENST00000312841 RSPH4AQ5TD94 716 aa23.25■■□□□ 1.31
HR-201ENST00000312841 CHMP4BQ9H444 224 aaKnown RBP23.24■■□□□ 1.31
HR-201ENST00000312841 POGKQ9P215 609 aa23.23■■□□□ 1.31
HR-201ENST00000312841 TMF1P82094 1093 aa23.23■■□□□ 1.31
HR-201ENST00000312841 SCAF1Q9H7N4 1312 aaKnown RBP23.21■■□□□ 1.31
HR-201ENST00000312841 ANKRD30AQ9BXX3 1397 aa23.21■■□□□ 1.31
HR-201ENST00000312841 CCDC18Q5T9S5 1454 aa23.2■■□□□ 1.3
HR-201ENST00000312841 EFCAB2Q5VUJ9 269 aa23.19■■□□□ 1.3
HR-201ENST00000312841 TDRD9Q8NDG6 1382 aaKnown RBP23.18■■□□□ 1.3
HR-201ENST00000312841 MAPK8IP3Q9UPT6 1336 aa23.18■■□□□ 1.3
HR-201ENST00000312841 MS4A1P11836 297 aa23.17■■□□□ 1.3
HR-201ENST00000312841 DDRGK1Q96HY6 314 aa23.16■■□□□ 1.3
HR-201ENST00000312841 HIRIP3Q9BW71 556 aaPredicted RBP23.14■■□□□ 1.3
HR-201ENST00000312841 FANCD2Q9BXW9 1451 aa23.13■■□□□ 1.29
HR-201ENST00000312841 BECN1Q14457 450 aa23.1■■□□□ 1.29
HR-201ENST00000312841 HAP1P54257 671 aaPredicted RBP23.09■■□□□ 1.29
HR-201ENST00000312841 SIN3AQ96ST3 1273 aa23.08■■□□□ 1.29
HR-201ENST00000312841 DCAF11Q8TEB1 546 aa23.08■■□□□ 1.28
HR-201ENST00000312841 CCER2I3L3R5 266 aa23.06■■□□□ 1.28
HR-201ENST00000312841 ZBTB7CA1YPR0 619 aa23.05■■□□□ 1.28
HR-201ENST00000312841 CASC1Q6TDU7 716 aa23.05■■□□□ 1.28
HR-201ENST00000312841 ANP32EQ9BTT0 268 aa23.05■■□□□ 1.28
HR-201ENST00000312841 EIF3AQ14152 1382 aaKnown RBP23.05■■□□□ 1.28
HR-201ENST00000312841 CDK11BP21127 795 aaKnown RBP23.02■■□□□ 1.28
HR-201ENST00000312841 FTSJ3Q8IY81 847 aaKnown RBP23.02■■□□□ 1.28
HR-201ENST00000312841 PKD2Q13563 968 aa23■■□□□ 1.27
HR-201ENST00000312841 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
HR-201ENST00000312841 KANK4Q5T7N3 995 aaPredicted RBP22.97■■□□□ 1.27
HR-201ENST00000312841 RAB3GAP2Q9H2M9 1393 aa22.97■■□□□ 1.27
HR-201ENST00000312841 NUP155O75694 1391 aa22.96■■□□□ 1.27
HR-201ENST00000312841 FHOD3Q2V2M9 1422 aa22.95■■□□□ 1.27
HR-201ENST00000312841 MPHOSPH9Q99550 1183 aa22.95■■□□□ 1.26
HR-201ENST00000312841 PPM1GO15355 546 aaPredicted RBP22.94■■□□□ 1.26
HR-201ENST00000312841 KTN1Q86UP2 1357 aaKnown RBP22.93■■□□□ 1.26
HR-201ENST00000312841 HDGFL2Q7Z4V5 671 aaPredicted RBP22.93■■□□□ 1.26
HR-201ENST00000312841 GLIPR1L2Q4G1C9 344 aa22.92■■□□□ 1.26
HR-201ENST00000312841 A0A0G2JS52 829 aa22.92■■□□□ 1.26
HR-201ENST00000312841 JPH4Q96JJ6 628 aa22.92■■□□□ 1.26
HR-201ENST00000312841 PPP4R2Q9NY27 417 aa22.91■■□□□ 1.26
HR-201ENST00000312841 GOLGA6L22H0YM25 854 aa22.9■■□□□ 1.26
HR-201ENST00000312841 NCLP19338 710 aaKnown RBP22.9■■□□□ 1.26
HR-201ENST00000312841 RALBP1Q15311 655 aa22.9■■□□□ 1.26
HR-201ENST00000312841 ROCK2O75116 1388 aaKnown RBP22.89■■□□□ 1.26
HR-201ENST00000312841 SRPK2P78362 688 aaKnown RBP22.89■■□□□ 1.25
HR-201ENST00000312841 CFAP44Q96MT7 982 aa22.89■■□□□ 1.25
HR-201ENST00000312841 TRHP20396 242 aaPredicted RBP22.88■■□□□ 1.25
HR-201ENST00000312841 GGT6Q6P531 493 aa22.88■■□□□ 1.25
HR-201ENST00000312841 MORC1Q86VD1 984 aa22.88■■□□□ 1.25
HR-201ENST00000312841 SPAG9O60271 1321 aaKnown RBP22.87■■□□□ 1.25
HR-201ENST00000312841 HSPA5P11021 654 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms