RNA–Protein interactions for RNA: ENST00000310454.10

GPD2-201, Transcript of glycerol-3-phosphate dehydrogenase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPD2, Length 6,041 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPD2-201ENST00000310454 RTN4Q9NQC3 1192 aaKnown RBP22.19■■□□□ 1.14
GPD2-201ENST00000310454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.18■■□□□ 1.14
GPD2-201ENST00000310454 CSRNP3Q8WYN3 585 aa22.17■■□□□ 1.14
GPD2-201ENST00000310454 CASC1Q6TDU7 716 aa22.16■■□□□ 1.14
GPD2-201ENST00000310454 KDM2AQ9Y2K7 1162 aa22.15■■□□□ 1.14
GPD2-201ENST00000310454 ZBTB7CA1YPR0 619 aa22.14■■□□□ 1.14
GPD2-201ENST00000310454 PPM1GO15355 546 aaPredicted RBP22.13■■□□□ 1.13
GPD2-201ENST00000310454 MIER1Q8N108 512 aa22.11■■□□□ 1.13
GPD2-201ENST00000310454 CHIC2Q9UKJ5 165 aa22.11■■□□□ 1.13
GPD2-201ENST00000310454 PLCB2Q00722 1185 aa22.09■■□□□ 1.13
GPD2-201ENST00000310454 GOLGA6L6A8MZA4 724 aa22.09■■□□□ 1.13
GPD2-201ENST00000310454 LAS1LQ9Y4W2 734 aaKnown RBP22.07■■□□□ 1.12
GPD2-201ENST00000310454 AMER1Q5JTC6 1135 aaPredicted RBP22.03■■□□□ 1.12
GPD2-201ENST00000310454 HIRIP3Q9BW71 556 aaPredicted RBP22.03■■□□□ 1.12
GPD2-201ENST00000310454 PLEKHG5O94827 1062 aa22.01■■□□□ 1.11
GPD2-201ENST00000310454 C14orf37Q86TY3 774 aa22■■□□□ 1.11
GPD2-201ENST00000310454 TAOK2Q9UL54 1235 aa21.97■■□□□ 1.11
GPD2-201ENST00000310454 FTSJ3Q8IY81 847 aaKnown RBP21.97■■□□□ 1.11
GPD2-201ENST00000310454 NOP58Q9Y2X3 529 aaKnown RBP21.95■■□□□ 1.1
GPD2-201ENST00000310454 EIF4G2P78344 907 aaKnown RBP eCLIP21.94■■□□□ 1.1
GPD2-201ENST00000310454 HSP90AB1P08238 724 aaKnown RBP21.94■■□□□ 1.1
GPD2-201ENST00000310454 NPM1P06748 294 aaKnown RBP eCLIP21.93■■□□□ 1.1
GPD2-201ENST00000310454 CHAF1AQ13111 956 aaPredicted RBP21.93■■□□□ 1.1
GPD2-201ENST00000310454 NRDCO43847 1150 aa21.92■■□□□ 1.1
GPD2-201ENST00000310454 SENP3-EIF4A1A0A087X0R7 540 aa21.9■■□□□ 1.1
GPD2-201ENST00000310454 SENP3Q9H4L4 574 aaPredicted RBP21.9■■□□□ 1.1
GPD2-201ENST00000310454 CFAP53Q96M91 514 aa21.88■■□□□ 1.09
GPD2-201ENST00000310454 SUPT16HQ9Y5B9 1047 aaKnown RBP21.88■■□□□ 1.09
GPD2-201ENST00000310454 MSNP26038 577 aaKnown RBP21.86■■□□□ 1.09
GPD2-201ENST00000310454 TSPY4P0CV99 314 aa21.85■■□□□ 1.09
GPD2-201ENST00000310454 TSPY10P0CW01 314 aa21.85■■□□□ 1.09
GPD2-201ENST00000310454 RGS3P49796 1198 aa21.85■■□□□ 1.09
GPD2-201ENST00000310454 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
GPD2-201ENST00000310454 ABCC9O60706 1549 aa21.83■■□□□ 1.08
GPD2-201ENST00000310454 FGD1P98174 961 aa21.82■■□□□ 1.08
GPD2-201ENST00000310454 NAP1L2Q9ULW6 460 aaPredicted RBP21.81■■□□□ 1.08
GPD2-201ENST00000310454 PPP1R15AO75807 674 aaPredicted RBP21.8■■□□□ 1.08
GPD2-201ENST00000310454 L1TD1Q5T7N2 865 aaKnown RBP21.79■■□□□ 1.08
GPD2-201ENST00000310454 DRC7Q8IY82 874 aa21.79■■□□□ 1.08
GPD2-201ENST00000310454 PPP4R2Q9NY27 417 aa21.79■■□□□ 1.08
GPD2-201ENST00000310454 GOLGA6L4A6NEF3 574 aa21.78■■□□□ 1.08
GPD2-201ENST00000310454 ARID4BQ4LE39 1312 aaPredicted RBP21.76■■□□□ 1.07
GPD2-201ENST00000310454 OS9Q13438 667 aaPredicted RBP21.76■■□□□ 1.07
GPD2-201ENST00000310454 KNSTRNQ9Y448 316 aa21.76■■□□□ 1.07
GPD2-201ENST00000310454 HSCBQ8IWL3 235 aa21.75■■□□□ 1.07
GPD2-201ENST00000310454 KCNJ4P48050 445 aa21.75■■□□□ 1.07
GPD2-201ENST00000310454 NEUROD2Q15784 382 aa21.75■■□□□ 1.07
GPD2-201ENST00000310454 NCBP3Q53F19 620 aaKnown RBP21.75■■□□□ 1.07
GPD2-201ENST00000310454 FRAT1Q92837 279 aaPredicted RBP21.75■■□□□ 1.07
GPD2-201ENST00000310454 MAPK8IP3Q9UPT6 1336 aa21.74■■□□□ 1.07
GPD2-201ENST00000310454 HAP1P54257 671 aaPredicted RBP21.74■■□□□ 1.07
GPD2-201ENST00000310454 CLSTN1O94985 981 aa21.74■■□□□ 1.07
GPD2-201ENST00000310454 DEKP35659 375 aaKnown RBP21.72■■□□□ 1.07
GPD2-201ENST00000310454 MTUS2Q5JR59 1369 aa21.72■■□□□ 1.07
GPD2-201ENST00000310454 RRP7BPQ9NSQ0 103 aa21.7■■□□□ 1.06
GPD2-201ENST00000310454 CHMP4BQ9H444 224 aaKnown RBP21.69■■□□□ 1.06
GPD2-201ENST00000310454 SPRYD3Q8NCJ5 442 aa21.68■■□□□ 1.06
GPD2-201ENST00000310454 CDCA8Q53HL2 280 aa21.67■■□□□ 1.06
GPD2-201ENST00000310454 NPHP1O15259 732 aa21.66■■□□□ 1.06
GPD2-201ENST00000310454 RGL3Q3MIN7 710 aa21.64■■□□□ 1.06
GPD2-201ENST00000310454 PNNQ9H307 717 aaKnown RBP21.64■■□□□ 1.06
GPD2-201ENST00000310454 ARID3AQ99856 593 aa21.64■■□□□ 1.05
GPD2-201ENST00000310454 MS4A1P11836 297 aa21.63■■□□□ 1.05
GPD2-201ENST00000310454 NUDCQ9Y266 331 aa21.63■■□□□ 1.05
GPD2-201ENST00000310454 GOLGA2Q08379 1002 aa21.62■■□□□ 1.05
GPD2-201ENST00000310454 MCCP23508 829 aa21.61■■□□□ 1.05
GPD2-201ENST00000310454 TNNT3P45378 269 aaPredicted RBP21.6■■□□□ 1.05
GPD2-201ENST00000310454 B4GALNT3Q6L9W6 998 aa21.59■■□□□ 1.05
GPD2-201ENST00000310454 KIAA2012Q0VF49 1180 aa21.59■■□□□ 1.05
GPD2-201ENST00000310454 NOC3LQ8WTT2 800 aaKnown RBP21.59■■□□□ 1.05
GPD2-201ENST00000310454 CARD11Q9BXL7 1154 aa21.57■■□□□ 1.04
GPD2-201ENST00000310454 GNL2Q13823 731 aaKnown RBP21.54■■□□□ 1.04
GPD2-201ENST00000310454 CC2D1BQ5T0F9 858 aaKnown RBP21.52■■□□□ 1.04
GPD2-201ENST00000310454 PTMSP20962 102 aa21.5■■□□□ 1.03
GPD2-201ENST00000310454 U2SURPO15042 1029 aaKnown RBP21.49■■□□□ 1.03
GPD2-201ENST00000310454 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.49■■□□□ 1.03
GPD2-201ENST00000310454 ISY1Q9ULR0 285 aaKnown RBP21.48■■□□□ 1.03
GPD2-201ENST00000310454 LMOD2Q6P5Q4 547 aa21.47■■□□□ 1.03
GPD2-201ENST00000310454 GBP4Q96PP9 640 aa21.46■■□□□ 1.03
GPD2-201ENST00000310454 CFAP44Q96MT7 982 aa21.46■■□□□ 1.03
GPD2-201ENST00000310454 GZF1Q9H116 711 aaPredicted RBP21.44■■□□□ 1.02
GPD2-201ENST00000310454 GOLGA6L1Q8N7Z2 621 aa21.43■■□□□ 1.02
GPD2-201ENST00000310454 KCNH8Q96L42 1107 aa21.43■■□□□ 1.02
GPD2-201ENST00000310454 POGKQ9P215 609 aa21.43■■□□□ 1.02
GPD2-201ENST00000310454 CLIP1P30622 1438 aa21.42■■□□□ 1.02
GPD2-201ENST00000310454 A0A0U1RQG5 324 aaPredicted RBP21.42■■□□□ 1.02
GPD2-201ENST00000310454 RSF1Q96T23 1441 aaPredicted RBP21.4■■□□□ 1.02
GPD2-201ENST00000310454 TPM4P67936 248 aa21.39■■□□□ 1.02
GPD2-201ENST00000310454 RBM19Q9Y4C8 960 aaKnown RBP21.39■■□□□ 1.01
GPD2-201ENST00000310454 PRM3Q9NNZ6 103 aa21.38■■□□□ 1.01
GPD2-201ENST00000310454 CHMP7Q8WUX9 453 aaPredicted RBP21.38■■□□□ 1.01
GPD2-201ENST00000310454 SYAP1Q96A49 352 aaPredicted RBP21.37■■□□□ 1.01
GPD2-201ENST00000310454 KIAA1211Q6ZU35 1233 aa21.37■■□□□ 1.01
GPD2-201ENST00000310454 HTATSF1O43719 755 aaKnown RBP21.36■■□□□ 1.01
GPD2-201ENST00000310454 GOLGA6L3A6NEY3 463 aa21.34■■□□□ 1.01
GPD2-201ENST00000310454 APBB1O00213 710 aa21.34■■□□□ 1.01
GPD2-201ENST00000310454 PDE4CQ08493 712 aa21.33■■□□□ 1
GPD2-201ENST00000310454 SLKQ9H2G2 1235 aaPredicted RBP21.31■■□□□ 1
GPD2-201ENST00000310454 PLEKHD1A6NEE1 506 aa21.31■■□□□ 1
GPD2-201ENST00000310454 HSP90B1P14625 803 aaKnown RBP21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms