RNA–Protein interactions for RNA: ENST00000308527.5

SNX33-201, Transcript of sorting nexin 33, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX33, Length 8,008 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33-201ENST00000308527 PTMAP06454 111 aaKnown RBP16.76■□□□□ 0.27
SNX33-201ENST00000308527 PLEKHG5O94827 1062 aa16.75■□□□□ 0.27
SNX33-201ENST00000308527 KDM2AQ9Y2K7 1162 aa16.74■□□□□ 0.27
SNX33-201ENST00000308527 DNTTIP2Q5QJE6 756 aaKnown RBP16.74■□□□□ 0.27
SNX33-201ENST00000308527 PPP1R15AO75807 674 aaPredicted RBP16.71■□□□□ 0.27
SNX33-201ENST00000308527 NPHP1O15259 732 aa16.7■□□□□ 0.26
SNX33-201ENST00000308527 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
SNX33-201ENST00000308527 TSPY4P0CV99 314 aa16.7■□□□□ 0.26
SNX33-201ENST00000308527 TSPY10P0CW01 314 aa16.7■□□□□ 0.26
SNX33-201ENST00000308527 MRS2Q9HD23 443 aa16.7■□□□□ 0.26
SNX33-201ENST00000308527 GOLGA6L6A8MZA4 724 aa16.69■□□□□ 0.26
SNX33-201ENST00000308527 CHIC2Q9UKJ5 165 aa16.65■□□□□ 0.26
SNX33-201ENST00000308527 FTSJ3Q8IY81 847 aaKnown RBP16.63■□□□□ 0.25
SNX33-201ENST00000308527 TPRNQ4KMQ1 711 aa16.62■□□□□ 0.25
SNX33-201ENST00000308527 CFAP53Q96M91 514 aa16.62■□□□□ 0.25
SNX33-201ENST00000308527 SCRIBQ14160 1630 aa16.58■□□□□ 0.25
SNX33-201ENST00000308527 GOLGA2Q08379 1002 aa16.58■□□□□ 0.24
SNX33-201ENST00000308527 NRDCO43847 1150 aa16.58■□□□□ 0.24
SNX33-201ENST00000308527 SENP3Q9H4L4 574 aaPredicted RBP16.56■□□□□ 0.24
SNX33-201ENST00000308527 MTUS2Q5JR59 1369 aa16.56■□□□□ 0.24
SNX33-201ENST00000308527 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
SNX33-201ENST00000308527 FGD1P98174 961 aa16.55■□□□□ 0.24
SNX33-201ENST00000308527 IRX6P78412 446 aaPredicted RBP16.54■□□□□ 0.24
SNX33-201ENST00000308527 TAOK2Q9UL54 1235 aa16.54■□□□□ 0.24
SNX33-201ENST00000308527 ARID4BQ4LE39 1312 aaPredicted RBP16.53■□□□□ 0.24
SNX33-201ENST00000308527 PPM1GO15355 546 aaPredicted RBP16.53■□□□□ 0.24
SNX33-201ENST00000308527 CLSTN1O94985 981 aa16.53■□□□□ 0.24
SNX33-201ENST00000308527 EIF4G2P78344 907 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNX33-201ENST00000308527 CDCA8Q53HL2 280 aa16.53■□□□□ 0.24
SNX33-201ENST00000308527 PLCB2Q00722 1185 aa16.51■□□□□ 0.23
SNX33-201ENST00000308527 OS9Q13438 667 aaPredicted RBP16.51■□□□□ 0.23
SNX33-201ENST00000308527 LAS1LQ9Y4W2 734 aaKnown RBP16.5■□□□□ 0.23
SNX33-201ENST00000308527 CHMP7Q8WUX9 453 aaPredicted RBP16.5■□□□□ 0.23
SNX33-201ENST00000308527 CHMP4BQ9H444 224 aaKnown RBP16.5■□□□□ 0.23
SNX33-201ENST00000308527 NAP1L2Q9ULW6 460 aaPredicted RBP16.49■□□□□ 0.23
SNX33-201ENST00000308527 KNSTRNQ9Y448 316 aa16.49■□□□□ 0.23
SNX33-201ENST00000308527 KCNJ4P48050 445 aa16.49■□□□□ 0.23
SNX33-201ENST00000308527 L1TD1Q5T7N2 865 aaKnown RBP16.49■□□□□ 0.23
SNX33-201ENST00000308527 ERICH6BQ5W0A0 696 aa16.48■□□□□ 0.23
SNX33-201ENST00000308527 MAPK8IP3Q9UPT6 1336 aa16.48■□□□□ 0.23
SNX33-201ENST00000308527 CHAF1AQ13111 956 aaPredicted RBP16.47■□□□□ 0.23
SNX33-201ENST00000308527 NAP1L5Q96NT1 182 aaPredicted RBP16.47■□□□□ 0.23
SNX33-201ENST00000308527 HSP90AB1P08238 724 aaKnown RBP16.47■□□□□ 0.23
SNX33-201ENST00000308527 PNNQ9H307 717 aaKnown RBP16.44■□□□□ 0.22
SNX33-201ENST00000308527 LMOD2Q6P5Q4 547 aa16.43■□□□□ 0.22
SNX33-201ENST00000308527 GOLGA6L4A6NEF3 574 aa16.42■□□□□ 0.22
SNX33-201ENST00000308527 NUDCQ9Y266 331 aa16.42■□□□□ 0.22
SNX33-201ENST00000308527 KIAA2012Q0VF49 1180 aa16.41■□□□□ 0.22
SNX33-201ENST00000308527 MS4A1P11836 297 aa16.4■□□□□ 0.22
SNX33-201ENST00000308527 KCNH8Q96L42 1107 aa16.39■□□□□ 0.21
SNX33-201ENST00000308527 RSF1Q96T23 1441 aaPredicted RBP16.39■□□□□ 0.21
SNX33-201ENST00000308527 DRC7Q8IY82 874 aa16.37■□□□□ 0.21
SNX33-201ENST00000308527 RGL3Q3MIN7 710 aa16.37■□□□□ 0.21
SNX33-201ENST00000308527 MCCP23508 829 aa16.36■□□□□ 0.21
SNX33-201ENST00000308527 POGKQ9P215 609 aa16.36■□□□□ 0.21
SNX33-201ENST00000308527 ISY1Q9ULR0 285 aaKnown RBP16.36■□□□□ 0.21
SNX33-201ENST00000308527 HIRIP3Q9BW71 556 aaPredicted RBP16.36■□□□□ 0.21
SNX33-201ENST00000308527 RRP7BPQ9NSQ0 103 aa16.35■□□□□ 0.21
SNX33-201ENST00000308527 DCAF1Q9Y4B6 1507 aa16.35■□□□□ 0.21
SNX33-201ENST00000308527 GNL2Q13823 731 aaKnown RBP16.35■□□□□ 0.21
SNX33-201ENST00000308527 NOC3LQ8WTT2 800 aaKnown RBP16.33■□□□□ 0.2
SNX33-201ENST00000308527 MSNP26038 577 aaKnown RBP16.33■□□□□ 0.2
SNX33-201ENST00000308527 NEUROD2Q15784 382 aa16.32■□□□□ 0.2
SNX33-201ENST00000308527 PLEKHD1A6NEE1 506 aa16.32■□□□□ 0.2
SNX33-201ENST00000308527 PRM3Q9NNZ6 103 aa16.31■□□□□ 0.2
SNX33-201ENST00000308527 HSCBQ8IWL3 235 aa16.31■□□□□ 0.2
SNX33-201ENST00000308527 CFAP44Q96MT7 982 aa16.31■□□□□ 0.2
SNX33-201ENST00000308527 FRAT1Q92837 279 aaPredicted RBP16.3■□□□□ 0.2
SNX33-201ENST00000308527 RB1CC1Q8TDY2 1594 aa16.3■□□□□ 0.2
SNX33-201ENST00000308527 CARD11Q9BXL7 1154 aa16.27■□□□□ 0.19
SNX33-201ENST00000308527 RGS3P49796 1198 aa16.27■□□□□ 0.19
SNX33-201ENST00000308527 MIER1Q8N108 512 aa16.26■□□□□ 0.19
SNX33-201ENST00000308527 U2SURPO15042 1029 aaKnown RBP16.25■□□□□ 0.19
SNX33-201ENST00000308527 TMX4Q9H1E5 349 aaPredicted RBP16.25■□□□□ 0.19
SNX33-201ENST00000308527 CCDC180Q9P1Z9 1646 aa16.25■□□□□ 0.19
SNX33-201ENST00000308527 SUPT16HQ9Y5B9 1047 aaKnown RBP16.23■□□□□ 0.19
SNX33-201ENST00000308527 HDGFP51858 240 aaKnown RBP16.22■□□□□ 0.19
SNX33-201ENST00000308527 ZCCHC6Q5VYS8 1495 aaKnown RBP16.21■□□□□ 0.19
SNX33-201ENST00000308527 KIAA1211Q6ZU35 1233 aa16.21■□□□□ 0.19
SNX33-201ENST00000308527 CLIP1P30622 1438 aa16.21■□□□□ 0.18
SNX33-201ENST00000308527 NOP58Q9Y2X3 529 aaKnown RBP16.2■□□□□ 0.18
SNX33-201ENST00000308527 RTF1Q92541 710 aaKnown RBP16.19■□□□□ 0.18
SNX33-201ENST00000308527 PTMSP20962 102 aa16.18■□□□□ 0.18
SNX33-201ENST00000308527 CFDP1Q9UEE9 299 aaPredicted RBP16.18■□□□□ 0.18
SNX33-201ENST00000308527 KANK1Q14678 1352 aa16.18■□□□□ 0.18
SNX33-201ENST00000308527 SENP3-EIF4A1A0A087X0R7 540 aa16.17■□□□□ 0.18
SNX33-201ENST00000308527 RTN4Q9NQC3 1192 aaKnown RBP16.17■□□□□ 0.18
SNX33-201ENST00000308527 ERCC6Q03468 1493 aa16.17■□□□□ 0.18
SNX33-201ENST00000308527 CC2D1BQ5T0F9 858 aaKnown RBP16.17■□□□□ 0.18
SNX33-201ENST00000308527 TPM4P67936 248 aa16.17■□□□□ 0.18
SNX33-201ENST00000308527 A0A0U1RQG5 324 aaPredicted RBP16.16■□□□□ 0.18
SNX33-201ENST00000308527 HTATSF1O43719 755 aaKnown RBP16.16■□□□□ 0.18
SNX33-201ENST00000308527 PPP4R2Q9NY27 417 aa16.16■□□□□ 0.18
SNX33-201ENST00000308527 AMER1Q5JTC6 1135 aaPredicted RBP16.15■□□□□ 0.18
SNX33-201ENST00000308527 CCDC34Q96HJ3 373 aa16.13■□□□□ 0.17
SNX33-201ENST00000308527 GOLGA6L1Q8N7Z2 621 aa16.13■□□□□ 0.17
SNX33-201ENST00000308527 USP35Q9P2H5 1018 aa16.13■□□□□ 0.17
SNX33-201ENST00000308527 TRHP20396 242 aaPredicted RBP16.12■□□□□ 0.17
SNX33-201ENST00000308527 TMF1P82094 1093 aa16.11■□□□□ 0.17
SNX33-201ENST00000308527 SRPK2P78362 688 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms