RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 DNTTIP2Q5QJE6 756 aaKnown RBP10.36□□□□□ -0.75
RSF1-201ENST00000308488 TNNT3P45378 269 aaPredicted RBP10.35□□□□□ -0.75
RSF1-201ENST00000308488 GOLGA6L22H0YM25 854 aa10.35□□□□□ -0.75
RSF1-201ENST00000308488 PTMAP06454 111 aaKnown RBP10.33□□□□□ -0.76
RSF1-201ENST00000308488 AMER1Q5JTC6 1135 aaPredicted RBP10.33□□□□□ -0.76
RSF1-201ENST00000308488 TIMELESSQ9UNS1 1208 aa10.32□□□□□ -0.76
RSF1-201ENST00000308488 CHAF1AQ13111 956 aaPredicted RBP10.32□□□□□ -0.76
RSF1-201ENST00000308488 RRP9O43818 475 aaKnown RBP10.31□□□□□ -0.76
RSF1-201ENST00000308488 MAP7D2Q96T17 732 aa10.31□□□□□ -0.76
RSF1-201ENST00000308488 MSNP26038 577 aaKnown RBP10.3□□□□□ -0.76
RSF1-201ENST00000308488 ARID4BQ4LE39 1312 aaPredicted RBP10.3□□□□□ -0.76
RSF1-201ENST00000308488 IPO9Q96P70 1041 aaKnown RBP10.3□□□□□ -0.76
RSF1-201ENST00000308488 TRIM52Q96A61 297 aa10.3□□□□□ -0.76
RSF1-201ENST00000308488 IRX6P78412 446 aaPredicted RBP10.28□□□□□ -0.76
RSF1-201ENST00000308488 APPP05067 770 aa10.27□□□□□ -0.77
RSF1-201ENST00000308488 CALRP27797 417 aaKnown RBP10.25□□□□□ -0.77
RSF1-201ENST00000308488 PDIA4P13667 645 aaKnown RBP10.25□□□□□ -0.77
RSF1-201ENST00000308488 MTERF4Q7Z6M4 381 aaKnown RBP10.25□□□□□ -0.77
RSF1-201ENST00000308488 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.23□□□□□ -0.77
RSF1-201ENST00000308488 TAF7LQ5H9L4 462 aa10.23□□□□□ -0.77
RSF1-201ENST00000308488 TPM2P07951 284 aa10.22□□□□□ -0.77
RSF1-201ENST00000308488 FAM43AQ8N2R8 423 aa10.22□□□□□ -0.77
RSF1-201ENST00000308488 DDX10Q13206 875 aaKnown RBP10.21□□□□□ -0.77
RSF1-201ENST00000308488 TAF3Q5VWG9 929 aa10.21□□□□□ -0.78
RSF1-201ENST00000308488 GSE1Q14687 1217 aa10.2□□□□□ -0.78
RSF1-201ENST00000308488 MYO15BQ96JP2 1530 aa10.2□□□□□ -0.78
RSF1-201ENST00000308488 GOLGA6L3A6NEY3 463 aa10.19□□□□□ -0.78
RSF1-201ENST00000308488 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.17□□□□□ -0.78
RSF1-201ENST00000308488 ATP1B4Q9UN42 357 aaPredicted RBP10.16□□□□□ -0.78
RSF1-201ENST00000308488 GOLGA6L6A8MZA4 724 aa10.16□□□□□ -0.78
RSF1-201ENST00000308488 ZMYND15Q9H091 742 aa10.15□□□□□ -0.78
RSF1-201ENST00000308488 KIAA2012Q0VF49 1180 aa10.15□□□□□ -0.78
RSF1-201ENST00000308488 CCER2I3L3R5 266 aa10.14□□□□□ -0.79
RSF1-201ENST00000308488 IL27Q8NEV9 243 aa10.13□□□□□ -0.79
RSF1-201ENST00000308488 TCERG1O14776 1098 aaKnown RBP10.13□□□□□ -0.79
RSF1-201ENST00000308488 ARID3AQ99856 593 aa10.13□□□□□ -0.79
RSF1-201ENST00000308488 FAM9BQ8IZU0 186 aa10.12□□□□□ -0.79
RSF1-201ENST00000308488 MRS2Q9HD23 443 aa10.12□□□□□ -0.79
RSF1-201ENST00000308488 PLEKHG5O94827 1062 aa10.12□□□□□ -0.79
RSF1-201ENST00000308488 B4GALNT3Q6L9W6 998 aa10.12□□□□□ -0.79
RSF1-201ENST00000308488 GOLGA6L1Q8N7Z2 621 aa10.12□□□□□ -0.79
RSF1-201ENST00000308488 HOMEZQ8IX15 550 aa10.12□□□□□ -0.79
RSF1-201ENST00000308488 ZNF771Q7L3S4 317 aaPredicted RBP10.11□□□□□ -0.79
RSF1-201ENST00000308488 TONSLQ96HA7 1378 aa10.1□□□□□ -0.79
RSF1-201ENST00000308488 EEA1Q15075 1411 aa10.09□□□□□ -0.79
RSF1-201ENST00000308488 CSPP1Q1MSJ5 1256 aa10.09□□□□□ -0.79
RSF1-201ENST00000308488 CCDC66A2RUB6 948 aa10.09□□□□□ -0.79
RSF1-201ENST00000308488 GBP4Q96PP9 640 aa10.09□□□□□ -0.79
RSF1-201ENST00000308488 BRPF3Q9ULD4 1205 aa10.09□□□□□ -0.79
RSF1-201ENST00000308488 MYH16Q9H6N6 1097 aa10.08□□□□□ -0.8
RSF1-201ENST00000308488 NRDCO43847 1150 aa10.08□□□□□ -0.8
RSF1-201ENST00000308488 RBM10P98175 930 aaKnown RBP10.07□□□□□ -0.8
RSF1-201ENST00000308488 SETQ01105 290 aaPredicted RBP10.07□□□□□ -0.8
RSF1-201ENST00000308488 HAP1P54257 671 aaPredicted RBP10.06□□□□□ -0.8
RSF1-201ENST00000308488 HMGB1P09429 215 aaKnown RBP10.05□□□□□ -0.8
RSF1-201ENST00000308488 FAM13BQ9NYF5 915 aa10.05□□□□□ -0.8
RSF1-201ENST00000308488 HSCBQ8IWL3 235 aa10.04□□□□□ -0.8
RSF1-201ENST00000308488 NOM1Q5C9Z4 860 aaKnown RBP10.03□□□□□ -0.8
RSF1-201ENST00000308488 DDX11L8A8MPP1 907 aa10.02□□□□□ -0.81
RSF1-201ENST00000308488 FAM50AQ14320 339 aaKnown RBP10.02□□□□□ -0.81
RSF1-201ENST00000308488 TSPYL1Q9H0U9 437 aa10.02□□□□□ -0.81
RSF1-201ENST00000308488 BBXQ8WY36 941 aaPredicted RBP10.01□□□□□ -0.81
RSF1-201ENST00000308488 PATL2C9JE40 543 aaKnown RBP10□□□□□ -0.81
RSF1-201ENST00000308488 HSP90AB1P08238 724 aaKnown RBP9.98□□□□□ -0.81
RSF1-201ENST00000308488 TMC1Q8TDI8 760 aa9.98□□□□□ -0.81
RSF1-201ENST00000308488 IRX3P78415 501 aaPredicted RBP9.98□□□□□ -0.81
RSF1-201ENST00000308488 GPS2Q13227 327 aa9.97□□□□□ -0.81
RSF1-201ENST00000308488 NCBP3Q53F19 620 aaKnown RBP9.97□□□□□ -0.81
RSF1-201ENST00000308488 TEX35Q5T0J7 233 aa9.97□□□□□ -0.81
RSF1-201ENST00000308488 CWC15Q9P013 229 aaKnown RBP9.96□□□□□ -0.81
RSF1-201ENST00000308488 HTATSF1O43719 755 aaKnown RBP9.96□□□□□ -0.82
RSF1-201ENST00000308488 MS4A1P11836 297 aa9.96□□□□□ -0.82
RSF1-201ENST00000308488 PDCL3Q9H2J4 239 aa9.95□□□□□ -0.82
RSF1-201ENST00000308488 HSP90B1P14625 803 aaKnown RBP9.95□□□□□ -0.82
RSF1-201ENST00000308488 C14orf37Q86TY3 774 aa9.94□□□□□ -0.82
RSF1-201ENST00000308488 SYAP1Q96A49 352 aaPredicted RBP9.94□□□□□ -0.82
RSF1-201ENST00000308488 BRD2P25440 801 aaKnown RBP9.94□□□□□ -0.82
RSF1-201ENST00000308488 FRAT1Q92837 279 aaPredicted RBP9.94□□□□□ -0.82
RSF1-201ENST00000308488 NAP1L2Q9ULW6 460 aaPredicted RBP9.93□□□□□ -0.82
RSF1-201ENST00000308488 GZF1Q9H116 711 aaPredicted RBP9.93□□□□□ -0.82
RSF1-201ENST00000308488 HMGN5P82970 282 aaKnown RBP9.93□□□□□ -0.82
RSF1-201ENST00000308488 SKOR2Q2VWA4 1001 aaPredicted RBP9.93□□□□□ -0.82
RSF1-201ENST00000308488 ISY1Q9ULR0 285 aaKnown RBP9.92□□□□□ -0.82
RSF1-201ENST00000308488 RGS3P49796 1198 aa9.91□□□□□ -0.82
RSF1-201ENST00000308488 SLKQ9H2G2 1235 aaPredicted RBP9.91□□□□□ -0.82
RSF1-201ENST00000308488 MRE11P49959 708 aa9.91□□□□□ -0.82
RSF1-201ENST00000308488 CALD1Q05682 793 aaKnown RBP9.9□□□□□ -0.82
RSF1-201ENST00000308488 PAXIP1Q6ZW49 1069 aaPredicted RBP9.9□□□□□ -0.82
RSF1-201ENST00000308488 ZRSR1Q15695 479 aaKnown RBP9.89□□□□□ -0.83
RSF1-201ENST00000308488 PHF14O94880 888 aa9.89□□□□□ -0.83
RSF1-201ENST00000308488 BCL11BQ9C0K0 894 aaPredicted RBP9.89□□□□□ -0.83
RSF1-201ENST00000308488 AXDND1Q5T1B0 1012 aaPredicted RBP9.88□□□□□ -0.83
RSF1-201ENST00000308488 FGD1P98174 961 aa9.87□□□□□ -0.83
RSF1-201ENST00000308488 NFKBIBQ15653 356 aa9.87□□□□□ -0.83
RSF1-201ENST00000308488 CASC1Q6TDU7 716 aa9.87□□□□□ -0.83
RSF1-201ENST00000308488 CC2D1BQ5T0F9 858 aaKnown RBP9.87□□□□□ -0.83
RSF1-201ENST00000308488 DRC7Q8IY82 874 aa9.86□□□□□ -0.83
RSF1-201ENST00000308488 DEF6Q9H4E7 631 aa9.86□□□□□ -0.83
RSF1-201ENST00000308488 WDR43Q15061 677 aaKnown RBP eCLIP9.86□□□□□ -0.83
RSF1-201ENST00000308488 KAT6BQ8WYB5 2073 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms