RNA–Protein interactions for RNA: ENST00000300481.13

TRPM2-201, Transcript of transient receptor potential cation channel subfamily M member 2, humanhuman

TSL 1 (best) BASIC

Gene TRPM2, Length 5,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM2-201ENST00000300481 ERICH6BQ5W0A0 696 aa17.17■□□□□ 0.34
TRPM2-201ENST00000300481 CHGAP10645 457 aaKnown RBP17.17■□□□□ 0.34
TRPM2-201ENST00000300481 BECN1Q14457 450 aa17.16■□□□□ 0.34
TRPM2-201ENST00000300481 SALL2Q9Y467 1007 aaPredicted RBP17.16■□□□□ 0.34
TRPM2-201ENST00000300481 PPM1GO15355 546 aaPredicted RBP17.15■□□□□ 0.34
TRPM2-201ENST00000300481 WRNQ14191 1432 aaPredicted RBP eCLIP17.15■□□□□ 0.34
TRPM2-201ENST00000300481 MTUS2Q5JR59 1369 aa17.14■□□□□ 0.33
TRPM2-201ENST00000300481 TSPY4P0CV99 314 aa17.12■□□□□ 0.33
TRPM2-201ENST00000300481 TSPY10P0CW01 314 aa17.12■□□□□ 0.33
TRPM2-201ENST00000300481 KIF27Q86VH2 1401 aa17.1■□□□□ 0.33
TRPM2-201ENST00000300481 RTN4Q9NQC3 1192 aaKnown RBP17.09■□□□□ 0.33
TRPM2-201ENST00000300481 CLIP1P30622 1438 aa17.08■□□□□ 0.32
TRPM2-201ENST00000300481 GOLGA3Q08378 1498 aa17.08■□□□□ 0.32
TRPM2-201ENST00000300481 NOP58Q9Y2X3 529 aaKnown RBP17.07■□□□□ 0.32
TRPM2-201ENST00000300481 NAP1L5Q96NT1 182 aaPredicted RBP17.06■□□□□ 0.32
TRPM2-201ENST00000300481 SUPT16HQ9Y5B9 1047 aaKnown RBP17.05■□□□□ 0.32
TRPM2-201ENST00000300481 WDR43Q15061 677 aaKnown RBP eCLIP17.04■□□□□ 0.32
TRPM2-201ENST00000300481 PLEKHD1A6NEE1 506 aa17.04■□□□□ 0.32
TRPM2-201ENST00000300481 GOLGA6L22H0YM25 854 aa17.03■□□□□ 0.32
TRPM2-201ENST00000300481 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.31
TRPM2-201ENST00000300481 SMARCA2P51531 1590 aa17■□□□□ 0.31
TRPM2-201ENST00000300481 PPP4R2Q9NY27 417 aa16.99■□□□□ 0.31
TRPM2-201ENST00000300481 DEKP35659 375 aaKnown RBP16.99■□□□□ 0.31
TRPM2-201ENST00000300481 CHIC2Q9UKJ5 165 aa16.99■□□□□ 0.31
TRPM2-201ENST00000300481 NCLP19338 710 aaKnown RBP16.98■□□□□ 0.31
TRPM2-201ENST00000300481 LAS1LQ9Y4W2 734 aaKnown RBP16.97■□□□□ 0.31
TRPM2-201ENST00000300481 CEP164Q9UPV0 1460 aa16.95■□□□□ 0.3
TRPM2-201ENST00000300481 CECR2Q9BXF3 1484 aa16.95■□□□□ 0.3
TRPM2-201ENST00000300481 MYO15BQ96JP2 1530 aa16.95■□□□□ 0.3
TRPM2-201ENST00000300481 A0A0G2JS52 829 aa16.94■□□□□ 0.3
TRPM2-201ENST00000300481 KCNH8Q96L42 1107 aa16.94■□□□□ 0.3
TRPM2-201ENST00000300481 HIRIP3Q9BW71 556 aaPredicted RBP16.94■□□□□ 0.3
TRPM2-201ENST00000300481 PTMAP06454 111 aaKnown RBP16.93■□□□□ 0.3
TRPM2-201ENST00000300481 EIF4G2P78344 907 aaKnown RBP eCLIP16.93■□□□□ 0.3
TRPM2-201ENST00000300481 MYH16Q9H6N6 1097 aa16.92■□□□□ 0.3
TRPM2-201ENST00000300481 DNTTIP2Q5QJE6 756 aaKnown RBP16.91■□□□□ 0.3
TRPM2-201ENST00000300481 PDS5BQ9NTI5 1447 aa16.91■□□□□ 0.3
TRPM2-201ENST00000300481 PLEKHG5O94827 1062 aa16.88■□□□□ 0.29
TRPM2-201ENST00000300481 RBM19Q9Y4C8 960 aaKnown RBP16.87■□□□□ 0.29
TRPM2-201ENST00000300481 CEP162Q5TB80 1403 aa16.87■□□□□ 0.29
TRPM2-201ENST00000300481 CDK11BP21127 795 aaKnown RBP16.85■□□□□ 0.29
TRPM2-201ENST00000300481 SENP3Q9H4L4 574 aaPredicted RBP16.85■□□□□ 0.29
TRPM2-201ENST00000300481 TNIKQ9UKE5 1360 aa16.84■□□□□ 0.29
TRPM2-201ENST00000300481 L1TD1Q5T7N2 865 aaKnown RBP16.82■□□□□ 0.28
TRPM2-201ENST00000300481 CFDP1Q9UEE9 299 aaPredicted RBP16.82■□□□□ 0.28
TRPM2-201ENST00000300481 CUX2O14529 1486 aa16.81■□□□□ 0.28
TRPM2-201ENST00000300481 PPP1R15AO75807 674 aaPredicted RBP16.79■□□□□ 0.28
TRPM2-201ENST00000300481 ZBTB7CA1YPR0 619 aa16.78■□□□□ 0.28
TRPM2-201ENST00000300481 CARMIL1Q5VZK9 1371 aa16.78■□□□□ 0.28
TRPM2-201ENST00000300481 MROH2BQ7Z745 1585 aa16.78■□□□□ 0.28
TRPM2-201ENST00000300481 ARID4BQ4LE39 1312 aaPredicted RBP16.78■□□□□ 0.28
TRPM2-201ENST00000300481 EIF4G1Q04637 1599 aaKnown RBP16.77■□□□□ 0.27
TRPM2-201ENST00000300481 FHAD1B1AJZ9 1412 aa16.76■□□□□ 0.27
TRPM2-201ENST00000300481 RRP7BPQ9NSQ0 103 aa16.76■□□□□ 0.27
TRPM2-201ENST00000300481 KDM2AQ9Y2K7 1162 aa16.76■□□□□ 0.27
TRPM2-201ENST00000300481 B4GALNT3Q6L9W6 998 aa16.76■□□□□ 0.27
TRPM2-201ENST00000300481 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
TRPM2-201ENST00000300481 C14orf37Q86TY3 774 aa16.73■□□□□ 0.27
TRPM2-201ENST00000300481 CASC1Q6TDU7 716 aa16.72■□□□□ 0.27
TRPM2-201ENST00000300481 MSNP26038 577 aaKnown RBP16.71■□□□□ 0.26
TRPM2-201ENST00000300481 TOP2AP11388 1531 aaKnown RBP16.71■□□□□ 0.26
TRPM2-201ENST00000300481 RGS3P49796 1198 aa16.7■□□□□ 0.26
TRPM2-201ENST00000300481 ZRSR1Q15695 479 aaKnown RBP16.7■□□□□ 0.26
TRPM2-201ENST00000300481 CARMIL2Q6F5E8 1435 aa16.7■□□□□ 0.26
TRPM2-201ENST00000300481 TSHZ2Q9NRE2 1034 aa16.69■□□□□ 0.26
TRPM2-201ENST00000300481 CCNB3Q8WWL7 1395 aa16.68■□□□□ 0.26
TRPM2-201ENST00000300481 SOGA1O94964 1423 aa16.68■□□□□ 0.26
TRPM2-201ENST00000300481 HSP90AB1P08238 724 aaKnown RBP16.67■□□□□ 0.26
TRPM2-201ENST00000300481 CHAF1AQ13111 956 aaPredicted RBP16.66■□□□□ 0.26
TRPM2-201ENST00000300481 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.66■□□□□ 0.26
TRPM2-201ENST00000300481 CCER2I3L3R5 266 aa16.65■□□□□ 0.26
TRPM2-201ENST00000300481 FTSJ3Q8IY81 847 aaKnown RBP16.65■□□□□ 0.26
TRPM2-201ENST00000300481 CADPSQ9ULU8 1353 aa16.65■□□□□ 0.26
TRPM2-201ENST00000300481 SENP3-EIF4A1A0A087X0R7 540 aa16.64■□□□□ 0.25
TRPM2-201ENST00000300481 GOLGA6L6A8MZA4 724 aa16.63■□□□□ 0.25
TRPM2-201ENST00000300481 PLCB2Q00722 1185 aa16.63■□□□□ 0.25
TRPM2-201ENST00000300481 HAP1P54257 671 aaPredicted RBP16.62■□□□□ 0.25
TRPM2-201ENST00000300481 HSCBQ8IWL3 235 aa16.61■□□□□ 0.25
TRPM2-201ENST00000300481 TPRNQ4KMQ1 711 aa16.6■□□□□ 0.25
TRPM2-201ENST00000300481 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
TRPM2-201ENST00000300481 CDCA8Q53HL2 280 aa16.6■□□□□ 0.25
TRPM2-201ENST00000300481 PNNQ9H307 717 aaKnown RBP16.6■□□□□ 0.25
TRPM2-201ENST00000300481 KANK1Q14678 1352 aa16.59■□□□□ 0.25
TRPM2-201ENST00000300481 CFAP53Q96M91 514 aa16.58■□□□□ 0.24
TRPM2-201ENST00000300481 ATAD2BQ9ULI0 1458 aa16.58■□□□□ 0.24
TRPM2-201ENST00000300481 KNSTRNQ9Y448 316 aa16.57■□□□□ 0.24
TRPM2-201ENST00000300481 NRDCO43847 1150 aa16.56■□□□□ 0.24
TRPM2-201ENST00000300481 SMARCA4P51532 1647 aa16.55■□□□□ 0.24
TRPM2-201ENST00000300481 WIZO95785 1651 aa16.54■□□□□ 0.24
TRPM2-201ENST00000300481 PTMSP20962 102 aa16.54■□□□□ 0.24
TRPM2-201ENST00000300481 RGL3Q3MIN7 710 aa16.54■□□□□ 0.24
TRPM2-201ENST00000300481 TDRD9Q8NDG6 1382 aaKnown RBP16.54■□□□□ 0.24
TRPM2-201ENST00000300481 MS4A1P11836 297 aa16.53■□□□□ 0.24
TRPM2-201ENST00000300481 AMER1Q5JTC6 1135 aaPredicted RBP16.53■□□□□ 0.24
TRPM2-201ENST00000300481 IPO9Q96P70 1041 aaKnown RBP16.53■□□□□ 0.24
TRPM2-201ENST00000300481 CHMP4BQ9H444 224 aaKnown RBP16.53■□□□□ 0.24
TRPM2-201ENST00000300481 HDGFP51858 240 aaKnown RBP16.52■□□□□ 0.24
TRPM2-201ENST00000300481 FRAT1Q92837 279 aaPredicted RBP16.52■□□□□ 0.23
TRPM2-201ENST00000300481 ABCC8Q09428 1581 aa16.52■□□□□ 0.23
TRPM2-201ENST00000300481 SIN3AQ96ST3 1273 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms