RNA–Protein interactions for RNA: ENST00000299441.4

DCHS1-201, Transcript of dachsous cadherin-related 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DCHS1, Length 10,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCHS1-201ENST00000299441 MYH16Q9H6N6 1097 aa18.66■□□□□ 0.58
DCHS1-201ENST00000299441 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.65■□□□□ 0.58
DCHS1-201ENST00000299441 CHMP7Q8WUX9 453 aaPredicted RBP18.65■□□□□ 0.58
DCHS1-201ENST00000299441 CDK11BP21127 795 aaKnown RBP18.62■□□□□ 0.57
DCHS1-201ENST00000299441 TAOK2Q9UL54 1235 aa18.62■□□□□ 0.57
DCHS1-201ENST00000299441 RRP7BPQ9NSQ0 103 aa18.6■□□□□ 0.57
DCHS1-201ENST00000299441 PPM1GO15355 546 aaPredicted RBP18.6■□□□□ 0.57
DCHS1-201ENST00000299441 MRS2Q9HD23 443 aa18.59■□□□□ 0.57
DCHS1-201ENST00000299441 MTUS2Q5JR59 1369 aa18.58■□□□□ 0.57
DCHS1-201ENST00000299441 TSPY4P0CV99 314 aa18.54■□□□□ 0.56
DCHS1-201ENST00000299441 TSPY10P0CW01 314 aa18.54■□□□□ 0.56
DCHS1-201ENST00000299441 RGL3Q3MIN7 710 aa18.53■□□□□ 0.56
DCHS1-201ENST00000299441 LMOD2Q6P5Q4 547 aa18.53■□□□□ 0.56
DCHS1-201ENST00000299441 NPHP1O15259 732 aa18.5■□□□□ 0.55
DCHS1-201ENST00000299441 LAS1LQ9Y4W2 734 aaKnown RBP18.49■□□□□ 0.55
DCHS1-201ENST00000299441 CCDC180Q9P1Z9 1646 aa18.46■□□□□ 0.55
DCHS1-201ENST00000299441 TNNT2P45379 298 aaPredicted RBP18.43■□□□□ 0.54
DCHS1-201ENST00000299441 ERCC6Q03468 1493 aa18.4■□□□□ 0.54
DCHS1-201ENST00000299441 ZCCHC6Q5VYS8 1495 aaKnown RBP18.4■□□□□ 0.54
DCHS1-201ENST00000299441 NCLP19338 710 aaKnown RBP18.38■□□□□ 0.53
DCHS1-201ENST00000299441 NEUROD2Q15784 382 aa18.38■□□□□ 0.53
DCHS1-201ENST00000299441 FTSJ3Q8IY81 847 aaKnown RBP18.37■□□□□ 0.53
DCHS1-201ENST00000299441 NCBP3Q53F19 620 aaKnown RBP18.37■□□□□ 0.53
DCHS1-201ENST00000299441 CLIP1P30622 1438 aa18.35■□□□□ 0.53
DCHS1-201ENST00000299441 KAT6BQ8WYB5 2073 aa18.33■□□□□ 0.53
DCHS1-201ENST00000299441 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
DCHS1-201ENST00000299441 RB1CC1Q8TDY2 1594 aa18.32■□□□□ 0.52
DCHS1-201ENST00000299441 SOX12O15370 315 aa18.32■□□□□ 0.52
DCHS1-201ENST00000299441 MIER1Q8N108 512 aa18.32■□□□□ 0.52
DCHS1-201ENST00000299441 EIF4G2P78344 907 aaKnown RBP eCLIP18.29■□□□□ 0.52
DCHS1-201ENST00000299441 TRHP20396 242 aaPredicted RBP18.29■□□□□ 0.52
DCHS1-201ENST00000299441 NAP1L2Q9ULW6 460 aaPredicted RBP18.29■□□□□ 0.52
DCHS1-201ENST00000299441 ZRSR1Q15695 479 aaKnown RBP18.28■□□□□ 0.52
DCHS1-201ENST00000299441 KNSTRNQ9Y448 316 aa18.28■□□□□ 0.52
DCHS1-201ENST00000299441 BECN1Q14457 450 aa18.27■□□□□ 0.52
DCHS1-201ENST00000299441 POGKQ9P215 609 aa18.27■□□□□ 0.52
DCHS1-201ENST00000299441 MLECQ14165 292 aa18.27■□□□□ 0.51
DCHS1-201ENST00000299441 DCAF1Q9Y4B6 1507 aa18.27■□□□□ 0.51
DCHS1-201ENST00000299441 CASC1Q6TDU7 716 aa18.26■□□□□ 0.51
DCHS1-201ENST00000299441 PLEKHD1A6NEE1 506 aa18.26■□□□□ 0.51
DCHS1-201ENST00000299441 CFAP53Q96M91 514 aa18.25■□□□□ 0.51
DCHS1-201ENST00000299441 GLIPR1L2Q4G1C9 344 aa18.25■□□□□ 0.51
DCHS1-201ENST00000299441 PTMAP06454 111 aaKnown RBP18.25■□□□□ 0.51
DCHS1-201ENST00000299441 OS9Q13438 667 aaPredicted RBP18.25■□□□□ 0.51
DCHS1-201ENST00000299441 CC2D1BQ5T0F9 858 aaKnown RBP18.23■□□□□ 0.51
DCHS1-201ENST00000299441 CLSTN1O94985 981 aa18.23■□□□□ 0.51
DCHS1-201ENST00000299441 TRIM44Q96DX7 344 aaPredicted RBP18.21■□□□□ 0.51
DCHS1-201ENST00000299441 GOLGA2Q08379 1002 aa18.21■□□□□ 0.51
DCHS1-201ENST00000299441 FRAT1Q92837 279 aaPredicted RBP18.2■□□□□ 0.5
DCHS1-201ENST00000299441 CFDP1Q9UEE9 299 aaPredicted RBP18.19■□□□□ 0.5
DCHS1-201ENST00000299441 SAFB2Q14151 953 aaKnown RBP eCLIP18.19■□□□□ 0.5
DCHS1-201ENST00000299441 MAPK8IP3Q9UPT6 1336 aa18.19■□□□□ 0.5
DCHS1-201ENST00000299441 RSF1Q96T23 1441 aaPredicted RBP18.19■□□□□ 0.5
DCHS1-201ENST00000299441 U2SURPO15042 1029 aaKnown RBP18.18■□□□□ 0.5
DCHS1-201ENST00000299441 FGD1P98174 961 aa18.18■□□□□ 0.5
DCHS1-201ENST00000299441 GOLGA6L22H0YM25 854 aa18.17■□□□□ 0.5
DCHS1-201ENST00000299441 ISY1Q9ULR0 285 aaKnown RBP18.17■□□□□ 0.5
DCHS1-201ENST00000299441 RGS3P49796 1198 aa18.17■□□□□ 0.5
DCHS1-201ENST00000299441 BAZ1BQ9UIG0 1483 aaKnown RBP18.17■□□□□ 0.5
DCHS1-201ENST00000299441 CARD11Q9BXL7 1154 aa18.16■□□□□ 0.5
DCHS1-201ENST00000299441 DNTTIP2Q5QJE6 756 aaKnown RBP18.16■□□□□ 0.5
DCHS1-201ENST00000299441 DDRGK1Q96HY6 314 aa18.15■□□□□ 0.5
DCHS1-201ENST00000299441 PLCB2Q00722 1185 aa18.14■□□□□ 0.49
DCHS1-201ENST00000299441 KCNJ4P48050 445 aa18.14■□□□□ 0.49
DCHS1-201ENST00000299441 MYO15BQ96JP2 1530 aa18.12■□□□□ 0.49
DCHS1-201ENST00000299441 AMER1Q5JTC6 1135 aaPredicted RBP18.11■□□□□ 0.49
DCHS1-201ENST00000299441 SUPT16HQ9Y5B9 1047 aaKnown RBP18.11■□□□□ 0.49
DCHS1-201ENST00000299441 CEP162Q5TB80 1403 aa18.11■□□□□ 0.49
DCHS1-201ENST00000299441 GOLGA3Q08378 1498 aa18.11■□□□□ 0.49
DCHS1-201ENST00000299441 CDCA8Q53HL2 280 aa18.05■□□□□ 0.48
DCHS1-201ENST00000299441 SPRYD3Q8NCJ5 442 aa18.05■□□□□ 0.48
DCHS1-201ENST00000299441 HSP90AB1P08238 724 aaKnown RBP18.05■□□□□ 0.48
DCHS1-201ENST00000299441 STK26Q9P289 416 aa18.05■□□□□ 0.48
DCHS1-201ENST00000299441 ZNF330Q9Y3S2 320 aaPredicted RBP18.04■□□□□ 0.48
DCHS1-201ENST00000299441 RTN4Q9NQC3 1192 aaKnown RBP18.04■□□□□ 0.48
DCHS1-201ENST00000299441 SRPK2P78362 688 aaKnown RBP18.04■□□□□ 0.48
DCHS1-201ENST00000299441 PAK3O75914 559 aaPredicted RBP18.03■□□□□ 0.48
DCHS1-201ENST00000299441 APBB1O00213 710 aa18.02■□□□□ 0.47
DCHS1-201ENST00000299441 NUDCQ9Y266 331 aa18.01■□□□□ 0.47
DCHS1-201ENST00000299441 SIN3AQ96ST3 1273 aa18■□□□□ 0.47
DCHS1-201ENST00000299441 KIF27Q86VH2 1401 aa17.97■□□□□ 0.47
DCHS1-201ENST00000299441 KANK1Q14678 1352 aa17.97■□□□□ 0.47
DCHS1-201ENST00000299441 NAP1L5Q96NT1 182 aaPredicted RBP17.96■□□□□ 0.47
DCHS1-201ENST00000299441 DCAF11Q8TEB1 546 aa17.96■□□□□ 0.47
DCHS1-201ENST00000299441 CCNB3Q8WWL7 1395 aa17.95■□□□□ 0.46
DCHS1-201ENST00000299441 WRNQ14191 1432 aaPredicted RBP eCLIP17.93■□□□□ 0.46
DCHS1-201ENST00000299441 GNL2Q13823 731 aaKnown RBP17.91■□□□□ 0.46
DCHS1-201ENST00000299441 FOXD1Q16676 465 aa17.91■□□□□ 0.46
DCHS1-201ENST00000299441 GOLGA6L6A8MZA4 724 aa17.9■□□□□ 0.46
DCHS1-201ENST00000299441 B4GALNT3Q6L9W6 998 aa17.9■□□□□ 0.46
DCHS1-201ENST00000299441 CCDC9Q9Y3X0 531 aaKnown RBP17.89■□□□□ 0.46
DCHS1-201ENST00000299441 PRDM2Q13029 1718 aa17.89■□□□□ 0.45
DCHS1-201ENST00000299441 GOLGA6L4A6NEF3 574 aa17.89■□□□□ 0.45
DCHS1-201ENST00000299441 CSB-PGBD3P0DP91 1061 aa17.88■□□□□ 0.45
DCHS1-201ENST00000299441 MORC1Q86VD1 984 aa17.88■□□□□ 0.45
DCHS1-201ENST00000299441 ANP32EQ9BTT0 268 aa17.88■□□□□ 0.45
DCHS1-201ENST00000299441 RTF1Q92541 710 aaKnown RBP17.87■□□□□ 0.45
DCHS1-201ENST00000299441 ERICH6BQ5W0A0 696 aa17.87■□□□□ 0.45
DCHS1-201ENST00000299441 GGT6Q6P531 493 aa17.87■□□□□ 0.45
DCHS1-201ENST00000299441 DRC7Q8IY82 874 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms