RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 SMARCA2P51531 1590 aa7.36□□□□□ -1.23
CPSF2-201ENST00000298875 BECN1Q14457 450 aa7.35□□□□□ -1.23
CPSF2-201ENST00000298875 DDRGK1Q96HY6 314 aa7.34□□□□□ -1.23
CPSF2-201ENST00000298875 SCAF1Q9H7N4 1312 aaKnown RBP7.34□□□□□ -1.23
CPSF2-201ENST00000298875 BAZ1AQ9NRL2 1556 aaPredicted RBP7.33□□□□□ -1.24
CPSF2-201ENST00000298875 TPRNQ4KMQ1 711 aa7.33□□□□□ -1.24
CPSF2-201ENST00000298875 MRS2Q9HD23 443 aa7.32□□□□□ -1.24
CPSF2-201ENST00000298875 PTMAP06454 111 aaKnown RBP7.32□□□□□ -1.24
CPSF2-201ENST00000298875 DNTTIP2Q5QJE6 756 aaKnown RBP7.32□□□□□ -1.24
CPSF2-201ENST00000298875 ZRSR1Q15695 479 aaKnown RBP7.31□□□□□ -1.24
CPSF2-201ENST00000298875 ZBTB7CA1YPR0 619 aa7.31□□□□□ -1.24
CPSF2-201ENST00000298875 A0A0G2JS52 829 aa7.31□□□□□ -1.24
CPSF2-201ENST00000298875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.31□□□□□ -1.247e-7■■□□□ 13.9
CPSF2-201ENST00000298875 ABCC8Q09428 1581 aa7.3□□□□□ -1.24
CPSF2-201ENST00000298875 BAZ1BQ9UIG0 1483 aaKnown RBP7.3□□□□□ -1.24
CPSF2-201ENST00000298875 GOLGA6L22H0YM25 854 aa7.3□□□□□ -1.24
CPSF2-201ENST00000298875 RTN4Q9NQC3 1192 aaKnown RBP7.3□□□□□ -1.24
CPSF2-201ENST00000298875 NAP1L5Q96NT1 182 aaPredicted RBP7.29□□□□□ -1.24
CPSF2-201ENST00000298875 KDM2AQ9Y2K7 1162 aa7.29□□□□□ -1.24
CPSF2-201ENST00000298875 CASC1Q6TDU7 716 aa7.28□□□□□ -1.24
CPSF2-201ENST00000298875 CHIC2Q9UKJ5 165 aa7.28□□□□□ -1.24
CPSF2-201ENST00000298875 TULP1O00294 542 aaPredicted RBP7.28□□□□□ -1.24
CPSF2-201ENST00000298875 PTMSP20962 102 aa7.27□□□□□ -1.25
CPSF2-201ENST00000298875 MIER1Q8N108 512 aa7.27□□□□□ -1.25
CPSF2-201ENST00000298875 SENP3Q9H4L4 574 aaPredicted RBP7.26□□□□□ -1.25
CPSF2-201ENST00000298875 PLEKHG5O94827 1062 aa7.26□□□□□ -1.25
CPSF2-201ENST00000298875 HIRIP3Q9BW71 556 aaPredicted RBP7.26□□□□□ -1.25
CPSF2-201ENST00000298875 CSRNP3Q8WYN3 585 aa7.26□□□□□ -1.25
CPSF2-201ENST00000298875 CHMP7Q8WUX9 453 aaPredicted RBP7.25□□□□□ -1.25
CPSF2-201ENST00000298875 PPM1GO15355 546 aaPredicted RBP7.25□□□□□ -1.25
CPSF2-201ENST00000298875 C14orf37Q86TY3 774 aa7.25□□□□□ -1.25
CPSF2-201ENST00000298875 LAS1LQ9Y4W2 734 aaKnown RBP7.25□□□□□ -1.25
CPSF2-201ENST00000298875 AMER1Q5JTC6 1135 aaPredicted RBP7.25□□□□□ -1.25
CPSF2-201ENST00000298875 TAOK2Q9UL54 1235 aa7.24□□□□□ -1.25
CPSF2-201ENST00000298875 FTSJ3Q8IY81 847 aaKnown RBP7.24□□□□□ -1.25
CPSF2-201ENST00000298875 GOLGA6L6A8MZA4 724 aa7.24□□□□□ -1.25
CPSF2-201ENST00000298875 SENP3-EIF4A1A0A087X0R7 540 aa7.23□□□□□ -1.25
CPSF2-201ENST00000298875 PLCB2Q00722 1185 aa7.22□□□□□ -1.25
CPSF2-201ENST00000298875 HSP90AB1P08238 724 aaKnown RBP7.2□□□□□ -1.26
CPSF2-201ENST00000298875 EIF4G2P78344 907 aaKnown RBP eCLIP7.2□□□□□ -1.26
CPSF2-201ENST00000298875 NOP58Q9Y2X3 529 aaKnown RBP7.2□□□□□ -1.26
CPSF2-201ENST00000298875 MTUS2Q5JR59 1369 aa7.2□□□□□ -1.26
CPSF2-201ENST00000298875 CECR2Q9BXF3 1484 aa7.2□□□□□ -1.26
CPSF2-201ENST00000298875 SUPT16HQ9Y5B9 1047 aaKnown RBP7.19□□□□□ -1.26
CPSF2-201ENST00000298875 PPP1R15AO75807 674 aaPredicted RBP7.19□□□□□ -1.26
CPSF2-201ENST00000298875 RGS3P49796 1198 aa7.18□□□□□ -1.26
CPSF2-201ENST00000298875 L1TD1Q5T7N2 865 aaKnown RBP7.18□□□□□ -1.26
CPSF2-201ENST00000298875 CFAP53Q96M91 514 aa7.18□□□□□ -1.26
CPSF2-201ENST00000298875 USP35Q9P2H5 1018 aa7.17□□□□□ -1.26
CPSF2-201ENST00000298875 CHAF1AQ13111 956 aaPredicted RBP7.17□□□□□ -1.26
CPSF2-201ENST00000298875 NRDCO43847 1150 aa7.17□□□□□ -1.26
CPSF2-201ENST00000298875 KNSTRNQ9Y448 316 aa7.17□□□□□ -1.26
CPSF2-201ENST00000298875 NAP1L2Q9ULW6 460 aaPredicted RBP7.16□□□□□ -1.26
CPSF2-201ENST00000298875 DRC7Q8IY82 874 aa7.16□□□□□ -1.26
CPSF2-201ENST00000298875 CLSTN1O94985 981 aa7.16□□□□□ -1.26
CPSF2-201ENST00000298875 CLIP1P30622 1438 aa7.16□□□□□ -1.26
CPSF2-201ENST00000298875 MSNP26038 577 aaKnown RBP7.16□□□□□ -1.26
CPSF2-201ENST00000298875 EEA1Q15075 1411 aa7.15□□□□□ -1.26
CPSF2-201ENST00000298875 RRP7BPQ9NSQ0 103 aa7.15□□□□□ -1.26
CPSF2-201ENST00000298875 A0A0U1RQG5 324 aaPredicted RBP7.15□□□□□ -1.26
CPSF2-201ENST00000298875 NEUROD2Q15784 382 aa7.15□□□□□ -1.26
CPSF2-201ENST00000298875 RSPH6AQ9H0K4 717 aa7.15□□□□□ -1.26
CPSF2-201ENST00000298875 CALRP27797 417 aaKnown RBP7.15□□□□□ -1.26
CPSF2-201ENST00000298875 TSPY4P0CV99 314 aa7.15□□□□□ -1.27
CPSF2-201ENST00000298875 TSPY10P0CW01 314 aa7.15□□□□□ -1.27
CPSF2-201ENST00000298875 OS9Q13438 667 aaPredicted RBP7.14□□□□□ -1.27
CPSF2-201ENST00000298875 MAPK8IP3Q9UPT6 1336 aa7.14□□□□□ -1.27
CPSF2-201ENST00000298875 FRAT1Q92837 279 aaPredicted RBP7.14□□□□□ -1.27
CPSF2-201ENST00000298875 HAP1P54257 671 aaPredicted RBP7.14□□□□□ -1.27
CPSF2-201ENST00000298875 FGD1P98174 961 aa7.14□□□□□ -1.27
CPSF2-201ENST00000298875 NCBP3Q53F19 620 aaKnown RBP7.13□□□□□ -1.27
CPSF2-201ENST00000298875 SPRYD3Q8NCJ5 442 aa7.13□□□□□ -1.27
CPSF2-201ENST00000298875 KCNJ4P48050 445 aa7.13□□□□□ -1.27
CPSF2-201ENST00000298875 HSCBQ8IWL3 235 aa7.13□□□□□ -1.27
CPSF2-201ENST00000298875 ARID3AQ99856 593 aa7.12□□□□□ -1.27
CPSF2-201ENST00000298875 PPP4R2Q9NY27 417 aa7.12□□□□□ -1.27
CPSF2-201ENST00000298875 GOLGA6L4A6NEF3 574 aa7.12□□□□□ -1.27
CPSF2-201ENST00000298875 RGL3Q3MIN7 710 aa7.11□□□□□ -1.27
CPSF2-201ENST00000298875 DEKP35659 375 aaKnown RBP7.11□□□□□ -1.27
CPSF2-201ENST00000298875 CC2D1BQ5T0F9 858 aaKnown RBP7.11□□□□□ -1.27
CPSF2-201ENST00000298875 NPHP1O15259 732 aa7.11□□□□□ -1.27
CPSF2-201ENST00000298875 CARMIL2Q6F5E8 1435 aa7.11□□□□□ -1.27
CPSF2-201ENST00000298875 RSF1Q96T23 1441 aaPredicted RBP7.11□□□□□ -1.27
CPSF2-201ENST00000298875 CARD11Q9BXL7 1154 aa7.1□□□□□ -1.27
CPSF2-201ENST00000298875 GOLGA3Q08378 1498 aa7.1□□□□□ -1.27
CPSF2-201ENST00000298875 CEP162Q5TB80 1403 aa7.09□□□□□ -1.27
CPSF2-201ENST00000298875 GOLGA2Q08379 1002 aa7.09□□□□□ -1.27
CPSF2-201ENST00000298875 GNL2Q13823 731 aaKnown RBP7.09□□□□□ -1.27
CPSF2-201ENST00000298875 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.09□□□□□ -1.27
CPSF2-201ENST00000298875 CEP164Q9UPV0 1460 aa7.09□□□□□ -1.27
CPSF2-201ENST00000298875 HDGFP51858 240 aaKnown RBP7.08□□□□□ -1.28
CPSF2-201ENST00000298875 CDCA8Q53HL2 280 aa7.08□□□□□ -1.28
CPSF2-201ENST00000298875 B4GALNT3Q6L9W6 998 aa7.08□□□□□ -1.28
CPSF2-201ENST00000298875 OSCARQ8IYS5 282 aa7.08□□□□□ -1.28
CPSF2-201ENST00000298875 NOC3LQ8WTT2 800 aaKnown RBP7.08□□□□□ -1.28
CPSF2-201ENST00000298875 MCCP23508 829 aa7.07□□□□□ -1.28
CPSF2-201ENST00000298875 CHMP4BQ9H444 224 aaKnown RBP7.07□□□□□ -1.28
CPSF2-201ENST00000298875 KCNH8Q96L42 1107 aa7.07□□□□□ -1.28
CPSF2-201ENST00000298875 CADPSQ9ULU8 1353 aa7.07□□□□□ -1.28
CPSF2-201ENST00000298875 KIAA2012Q0VF49 1180 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms