RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 PNNQ9H307 717 aaKnown RBP19.53■□□□□ 0.72
SEC16A-202ENST00000290037 ABCC8Q09428 1581 aa19.51■□□□□ 0.71
SEC16A-202ENST00000290037 FBLN2P98095 1184 aa19.51■□□□□ 0.71
SEC16A-202ENST00000290037 GOLGA6L22H0YM25 854 aa19.49■□□□□ 0.71
SEC16A-202ENST00000290037 HAP1P54257 671 aaPredicted RBP19.49■□□□□ 0.71
SEC16A-202ENST00000290037 FMN1Q68DA7 1419 aa19.49■□□□□ 0.71
SEC16A-202ENST00000290037 CCDC136Q96JN2 1154 aa19.49■□□□□ 0.71
SEC16A-202ENST00000290037 HNRNPUQ00839 825 aaKnown RBP eCLIP19.47■□□□□ 0.71
SEC16A-202ENST00000290037 CFAP53Q96M91 514 aa19.46■□□□□ 0.71
SEC16A-202ENST00000290037 VPS8Q8N3P4 1428 aa19.44■□□□□ 0.7
SEC16A-202ENST00000290037 CASC1Q6TDU7 716 aa19.43■□□□□ 0.7
SEC16A-202ENST00000290037 CHMP4AQ9BY43 222 aa19.42■□□□□ 0.7
SEC16A-202ENST00000290037 STAG3Q9UJ98 1225 aa19.41■□□□□ 0.7
SEC16A-202ENST00000290037 ARHGAP35Q9NRY4 1499 aa19.41■□□□□ 0.7
SEC16A-202ENST00000290037 PTMSP20962 102 aa19.41■□□□□ 0.7
SEC16A-202ENST00000290037 PLEKHD1A6NEE1 506 aa19.4■□□□□ 0.7
SEC16A-202ENST00000290037 PPM1GO15355 546 aaPredicted RBP19.39■□□□□ 0.69
SEC16A-202ENST00000290037 CCNB3Q8WWL7 1395 aa19.38■□□□□ 0.69
SEC16A-202ENST00000290037 CHMP7Q8WUX9 453 aaPredicted RBP19.38■□□□□ 0.69
SEC16A-202ENST00000290037 KANK1Q14678 1352 aa19.38■□□□□ 0.69
SEC16A-202ENST00000290037 ZNF777Q9ULD5 760 aaPredicted RBP19.37■□□□□ 0.69
SEC16A-202ENST00000290037 CCER2I3L3R5 266 aa19.36■□□□□ 0.69
SEC16A-202ENST00000290037 MRS2Q9HD23 443 aa19.36■□□□□ 0.69
SEC16A-202ENST00000290037 FKBP8Q14318 412 aa19.35■□□□□ 0.69
SEC16A-202ENST00000290037 BCANQ96GW7 911 aa19.34■□□□□ 0.69
SEC16A-202ENST00000290037 NCLP19338 710 aaKnown RBP19.34■□□□□ 0.69
SEC16A-202ENST00000290037 PHLDB1Q86UU1 1377 aa19.31■□□□□ 0.68
SEC16A-202ENST00000290037 PDS5BQ9NTI5 1447 aa19.31■□□□□ 0.68
SEC16A-202ENST00000290037 CARMIL2Q6F5E8 1435 aa19.31■□□□□ 0.68
SEC16A-202ENST00000290037 ROCK2O75116 1388 aaKnown RBP19.31■□□□□ 0.68
SEC16A-202ENST00000290037 SMARCA4P51532 1647 aa19.3■□□□□ 0.68
SEC16A-202ENST00000290037 HDGFP51858 240 aaKnown RBP19.27■□□□□ 0.67
SEC16A-202ENST00000290037 RSPH4AQ5TD94 716 aa19.26■□□□□ 0.67
SEC16A-202ENST00000290037 KNSTRNQ9Y448 316 aa19.26■□□□□ 0.67
SEC16A-202ENST00000290037 EIF3AQ14152 1382 aaKnown RBP19.25■□□□□ 0.67
SEC16A-202ENST00000290037 CNGB1Q14028 1251 aaPredicted RBP19.23■□□□□ 0.67
SEC16A-202ENST00000290037 NUDCQ9Y266 331 aa19.23■□□□□ 0.67
SEC16A-202ENST00000290037 SETD5Q9C0A6 1442 aa19.23■□□□□ 0.67
SEC16A-202ENST00000290037 TNNT2P45379 298 aaPredicted RBP19.23■□□□□ 0.67
SEC16A-202ENST00000290037 DDX10Q13206 875 aaKnown RBP19.23■□□□□ 0.67
SEC16A-202ENST00000290037 P3H3Q8IVL6 736 aa19.22■□□□□ 0.67
SEC16A-202ENST00000290037 CCDC18Q5T9S5 1454 aa19.21■□□□□ 0.67
SEC16A-202ENST00000290037 CFDP1Q9UEE9 299 aaPredicted RBP19.19■□□□□ 0.66
SEC16A-202ENST00000290037 NRDCO43847 1150 aa19.19■□□□□ 0.66
SEC16A-202ENST00000290037 CUX1P39880 1505 aa19.19■□□□□ 0.66
SEC16A-202ENST00000290037 CDK11BP21127 795 aaKnown RBP19.19■□□□□ 0.66
SEC16A-202ENST00000290037 GOLGA6L6A8MZA4 724 aa19.19■□□□□ 0.66
SEC16A-202ENST00000290037 ERCC6Q03468 1493 aa19.18■□□□□ 0.66
SEC16A-202ENST00000290037 TRIM44Q96DX7 344 aaPredicted RBP19.18■□□□□ 0.66
SEC16A-202ENST00000290037 CALD1Q05682 793 aaKnown RBP19.18■□□□□ 0.66
SEC16A-202ENST00000290037 PPP4R2Q9NY27 417 aa19.18■□□□□ 0.66
SEC16A-202ENST00000290037 CARMIL1Q5VZK9 1371 aa19.17■□□□□ 0.66
SEC16A-202ENST00000290037 FAM9BQ8IZU0 186 aa19.15■□□□□ 0.66
SEC16A-202ENST00000290037 NGEFQ8N5V2 710 aa19.12■□□□□ 0.65
SEC16A-202ENST00000290037 NPM2Q86SE8 214 aaKnown RBP19.12■□□□□ 0.65
SEC16A-202ENST00000290037 CUX2O14529 1486 aa19.12■□□□□ 0.65
SEC16A-202ENST00000290037 HDAC5Q9UQL6 1122 aa19.11■□□□□ 0.65
SEC16A-202ENST00000290037 ZRSR1Q15695 479 aaKnown RBP19.1■□□□□ 0.65
SEC16A-202ENST00000290037 CCDC88BA6NC98 1476 aa19.1■□□□□ 0.65
SEC16A-202ENST00000290037 UACAQ9BZF9 1416 aa19.1■□□□□ 0.65
SEC16A-202ENST00000290037 L1TD1Q5T7N2 865 aaKnown RBP19.09■□□□□ 0.65
SEC16A-202ENST00000290037 RALBP1Q15311 655 aa19.08■□□□□ 0.64
SEC16A-202ENST00000290037 STAC3Q96MF2 364 aa19.06■□□□□ 0.64
SEC16A-202ENST00000290037 TMF1P82094 1093 aa19.06■□□□□ 0.64
SEC16A-202ENST00000290037 KIF21BO75037 1637 aa19.06■□□□□ 0.64
SEC16A-202ENST00000290037 RAPGEF2Q9Y4G8 1499 aa19.06■□□□□ 0.64
SEC16A-202ENST00000290037 FTSJ3Q8IY81 847 aaKnown RBP19.05■□□□□ 0.64
SEC16A-202ENST00000290037 MAPK8IP3Q9UPT6 1336 aa19.05■□□□□ 0.64
SEC16A-202ENST00000290037 WIZO95785 1651 aa19.04■□□□□ 0.64
SEC16A-202ENST00000290037 ERICH3Q5RHP9 1530 aa19.04■□□□□ 0.64
SEC16A-202ENST00000290037 ANKRD30AQ9BXX3 1397 aa19.03■□□□□ 0.64
SEC16A-202ENST00000290037 MROH2BQ7Z745 1585 aa19.03■□□□□ 0.64
SEC16A-202ENST00000290037 CHGAP10645 457 aaKnown RBP19.01■□□□□ 0.63
SEC16A-202ENST00000290037 CARD11Q9BXL7 1154 aa19.01■□□□□ 0.63
SEC16A-202ENST00000290037 PDE3BQ13370 1112 aa19.01■□□□□ 0.63
SEC16A-202ENST00000290037 PPP1R15AO75807 674 aaPredicted RBP19.01■□□□□ 0.63
SEC16A-202ENST00000290037 KTN1Q86UP2 1357 aaKnown RBP19■□□□□ 0.63
SEC16A-202ENST00000290037 MCCP23508 829 aa18.98■□□□□ 0.63
SEC16A-202ENST00000290037 CHMP4CQ96CF2 233 aa18.98■□□□□ 0.63
SEC16A-202ENST00000290037 USP35Q9P2H5 1018 aa18.97■□□□□ 0.63
SEC16A-202ENST00000290037 IPO8O15397 1037 aaKnown RBP18.97■□□□□ 0.63
SEC16A-202ENST00000290037 EIF4G1Q04637 1599 aaKnown RBP18.95■□□□□ 0.62
SEC16A-202ENST00000290037 AAMPQ13685 434 aa18.95■□□□□ 0.62
SEC16A-202ENST00000290037 MIER1Q8N108 512 aa18.94■□□□□ 0.62
SEC16A-202ENST00000290037 SCAPERQ9BY12 1400 aa18.93■□□□□ 0.62
SEC16A-202ENST00000290037 CHIC2Q9UKJ5 165 aa18.93■□□□□ 0.62
SEC16A-202ENST00000290037 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.92■□□□□ 0.622e-6■■□□□ 11.6
SEC16A-202ENST00000290037 CHAF1AQ13111 956 aaPredicted RBP18.92■□□□□ 0.62
SEC16A-202ENST00000290037 EFCAB5A4FU69 1503 aa18.92■□□□□ 0.62
SEC16A-202ENST00000290037 HTATSF1O43719 755 aaKnown RBP18.9■□□□□ 0.62
SEC16A-202ENST00000290037 CECR2Q9BXF3 1484 aa18.87■□□□□ 0.61
SEC16A-202ENST00000290037 NOP58Q9Y2X3 529 aaKnown RBP18.86■□□□□ 0.61
SEC16A-202ENST00000290037 CCDC34Q96HJ3 373 aa18.86■□□□□ 0.61
SEC16A-202ENST00000290037 RRP7BPQ9NSQ0 103 aa18.85■□□□□ 0.61
SEC16A-202ENST00000290037 TCERG1O14776 1098 aaKnown RBP18.85■□□□□ 0.61
SEC16A-202ENST00000290037 SOGA1O94964 1423 aa18.85■□□□□ 0.61
SEC16A-202ENST00000290037 SYAP1Q96A49 352 aaPredicted RBP18.85■□□□□ 0.61
SEC16A-202ENST00000290037 CADPSQ9ULU8 1353 aa18.84■□□□□ 0.61
SEC16A-202ENST00000290037 HSCBQ8IWL3 235 aa18.83■□□□□ 0.6
SEC16A-202ENST00000290037 ANO8Q9HCE9 1232 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms