RNA–Protein interactions for RNA: ENST00000282223.11

SPOCK1-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5 BASIC

Gene SPOCK1, Length 4,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-201ENST00000282223 SLC24A1O60721 1099 aa10.54□□□□□ -0.72
SPOCK1-201ENST00000282223 HSP90AA2PQ14568 343 aaPredicted RBP10.51□□□□□ -0.73
SPOCK1-201ENST00000282223 SLC4A3P48751 1232 aa10.5□□□□□ -0.73
SPOCK1-201ENST00000282223 PPM1GO15355 546 aaPredicted RBP10.5□□□□□ -0.73
SPOCK1-201ENST00000282223 RSPH6AQ9H0K4 717 aa10.5□□□□□ -0.73
SPOCK1-201ENST00000282223 ARID3AQ99856 593 aa10.5□□□□□ -0.73
SPOCK1-201ENST00000282223 BAZ1BQ9UIG0 1483 aaKnown RBP10.49□□□□□ -0.73
SPOCK1-201ENST00000282223 AMER1Q5JTC6 1135 aaPredicted RBP10.48□□□□□ -0.73
SPOCK1-201ENST00000282223 GSE1Q14687 1217 aa10.47□□□□□ -0.73
SPOCK1-201ENST00000282223 HSP90AA1P07900 732 aaKnown RBP10.46□□□□□ -0.74
SPOCK1-201ENST00000282223 MRS2Q9HD23 443 aa10.46□□□□□ -0.74
SPOCK1-201ENST00000282223 CEP162Q5TB80 1403 aa10.45□□□□□ -0.74
SPOCK1-201ENST00000282223 FAM50AQ14320 339 aaKnown RBP10.45□□□□□ -0.74
SPOCK1-201ENST00000282223 PNNQ9H307 717 aaKnown RBP10.43□□□□□ -0.74
SPOCK1-201ENST00000282223 FRAT1Q92837 279 aaPredicted RBP10.42□□□□□ -0.74
SPOCK1-201ENST00000282223 CCER2I3L3R5 266 aa10.38□□□□□ -0.75
SPOCK1-201ENST00000282223 USP35Q9P2H5 1018 aa10.36□□□□□ -0.75
SPOCK1-201ENST00000282223 ZCCHC6Q5VYS8 1495 aaKnown RBP10.35□□□□□ -0.75
SPOCK1-201ENST00000282223 NFKBIBQ15653 356 aa10.35□□□□□ -0.75
SPOCK1-201ENST00000282223 GZF1Q9H116 711 aaPredicted RBP10.35□□□□□ -0.75
SPOCK1-201ENST00000282223 C11orf95C9JLR9 678 aaPredicted RBP10.34□□□□□ -0.75
SPOCK1-201ENST00000282223 DDRGK1Q96HY6 314 aa10.31□□□□□ -0.76
SPOCK1-201ENST00000282223 PDE4AP27815 886 aa10.31□□□□□ -0.76
SPOCK1-201ENST00000282223 DHX57Q6P158 1386 aaKnown RBP10.3□□□□□ -0.76
SPOCK1-201ENST00000282223 FRAT2O75474 233 aaPredicted RBP10.29□□□□□ -0.76
SPOCK1-201ENST00000282223 RBM10P98175 930 aaKnown RBP10.29□□□□□ -0.76
SPOCK1-201ENST00000282223 PDE4CQ08493 712 aa10.29□□□□□ -0.76
SPOCK1-201ENST00000282223 SLKQ9H2G2 1235 aaPredicted RBP10.29□□□□□ -0.76
SPOCK1-201ENST00000282223 TRIM44Q96DX7 344 aaPredicted RBP10.29□□□□□ -0.76
SPOCK1-201ENST00000282223 RGS3P49796 1198 aa10.28□□□□□ -0.76
SPOCK1-201ENST00000282223 TONSLQ96HA7 1378 aa10.27□□□□□ -0.76
SPOCK1-201ENST00000282223 SPRYD3Q8NCJ5 442 aa10.27□□□□□ -0.76
SPOCK1-201ENST00000282223 FAM43AQ8N2R8 423 aa10.27□□□□□ -0.77
SPOCK1-201ENST00000282223 ZNF326Q5BKZ1 582 aaKnown RBP10.26□□□□□ -0.77
SPOCK1-201ENST00000282223 ZBTB7CA1YPR0 619 aa10.26□□□□□ -0.77
SPOCK1-201ENST00000282223 SKAP1Q86WV1 359 aa10.25□□□□□ -0.77
SPOCK1-201ENST00000282223 PPP1R15AO75807 674 aaPredicted RBP10.25□□□□□ -0.77
SPOCK1-201ENST00000282223 CCDC184Q52MB2 194 aa10.23□□□□□ -0.77
SPOCK1-201ENST00000282223 WASHC2AQ641Q2 1341 aa10.23□□□□□ -0.77
SPOCK1-201ENST00000282223 TMC1Q8TDI8 760 aa10.22□□□□□ -0.77
SPOCK1-201ENST00000282223 TCERG1O14776 1098 aaKnown RBP10.21□□□□□ -0.77
SPOCK1-201ENST00000282223 EXOC6Q8TAG9 804 aa10.21□□□□□ -0.78
SPOCK1-201ENST00000282223 TNIKQ9UKE5 1360 aa10.2□□□□□ -0.78
SPOCK1-201ENST00000282223 FAM13BQ9NYF5 915 aa10.2□□□□□ -0.78
SPOCK1-201ENST00000282223 RRP9O43818 475 aaKnown RBP10.2□□□□□ -0.78
SPOCK1-201ENST00000282223 KANK4Q5T7N3 995 aaPredicted RBP10.2□□□□□ -0.78
SPOCK1-201ENST00000282223 DCAF11Q8TEB1 546 aa10.2□□□□□ -0.78
SPOCK1-201ENST00000282223 CLIP1P30622 1438 aa10.19□□□□□ -0.78
SPOCK1-201ENST00000282223 L1TD1Q5T7N2 865 aaKnown RBP10.19□□□□□ -0.78
SPOCK1-201ENST00000282223 MAPK8IP2Q13387 824 aaPredicted RBP10.18□□□□□ -0.78
SPOCK1-201ENST00000282223 RRAGDQ9NQL2 400 aaPredicted RBP10.18□□□□□ -0.78
SPOCK1-201ENST00000282223 POGKQ9P215 609 aa10.18□□□□□ -0.78
SPOCK1-201ENST00000282223 WASHC2CQ9Y4E1 1318 aa10.18□□□□□ -0.78
SPOCK1-201ENST00000282223 RSF1Q96T23 1441 aaPredicted RBP10.18□□□□□ -0.78
SPOCK1-201ENST00000282223 BCL11BQ9C0K0 894 aaPredicted RBP10.17□□□□□ -0.78
SPOCK1-201ENST00000282223 SOGA1O94964 1423 aa10.17□□□□□ -0.78
SPOCK1-201ENST00000282223 GOLGA6L3A6NEY3 463 aa10.16□□□□□ -0.78
SPOCK1-201ENST00000282223 TNNT2P45379 298 aaPredicted RBP10.16□□□□□ -0.78
SPOCK1-201ENST00000282223 ANP32BQ92688 251 aaKnown RBP10.16□□□□□ -0.78
SPOCK1-201ENST00000282223 ZHX1Q9UKY1 873 aaPredicted RBP10.16□□□□□ -0.78
SPOCK1-201ENST00000282223 PLIN1O60240 522 aa10.15□□□□□ -0.78
SPOCK1-201ENST00000282223 AEBP2Q6ZN18 517 aaPredicted RBP10.15□□□□□ -0.78
SPOCK1-201ENST00000282223 AKNAQ7Z591 1439 aa10.15□□□□□ -0.79
SPOCK1-201ENST00000282223 MYH16Q9H6N6 1097 aa10.15□□□□□ -0.79
SPOCK1-201ENST00000282223 WRNQ14191 1432 aaPredicted RBP eCLIP10.14□□□□□ -0.79
SPOCK1-201ENST00000282223 PRDM10Q9NQV6 1147 aa10.14□□□□□ -0.79
SPOCK1-201ENST00000282223 CDK11BP21127 795 aaKnown RBP10.14□□□□□ -0.79
SPOCK1-201ENST00000282223 EIF4G2P78344 907 aaKnown RBP eCLIP10.14□□□□□ -0.79
SPOCK1-201ENST00000282223 NUDCQ9Y266 331 aa10.13□□□□□ -0.79
SPOCK1-201ENST00000282223 P3H3Q8IVL6 736 aa10.13□□□□□ -0.79
SPOCK1-201ENST00000282223 BACH2Q9BYV9 841 aa10.13□□□□□ -0.79
SPOCK1-201ENST00000282223 BBXQ8WY36 941 aaPredicted RBP10.12□□□□□ -0.79
SPOCK1-201ENST00000282223 HSPA5P11021 654 aaKnown RBP10.11□□□□□ -0.79
SPOCK1-201ENST00000282223 BECN1Q14457 450 aa10.11□□□□□ -0.79
SPOCK1-201ENST00000282223 RAB3GAP2Q9H2M9 1393 aa10.1□□□□□ -0.79
SPOCK1-201ENST00000282223 AAMPQ13685 434 aa10.09□□□□□ -0.79
SPOCK1-201ENST00000282223 RB1CC1Q8TDY2 1594 aa10.09□□□□□ -0.79
SPOCK1-201ENST00000282223 PDIA4P13667 645 aaKnown RBP10.09□□□□□ -0.79
SPOCK1-201ENST00000282223 FGD1P98174 961 aa10.09□□□□□ -0.79
SPOCK1-201ENST00000282223 UPF2Q9HAU5 1272 aaKnown RBP10.09□□□□□ -0.79
SPOCK1-201ENST00000282223 ZBED9Q6R2W3 1325 aa10.08□□□□□ -0.8
SPOCK1-201ENST00000282223 DNTTIP2Q5QJE6 756 aaKnown RBP10.08□□□□□ -0.8
SPOCK1-201ENST00000282223 PANK2Q9BZ23 570 aa10.08□□□□□ -0.8
SPOCK1-201ENST00000282223 RCAN3Q9UKA8 241 aa10.08□□□□□ -0.8
SPOCK1-201ENST00000282223 EEA1Q15075 1411 aa10.07□□□□□ -0.8
SPOCK1-201ENST00000282223 PLCD3Q8N3E9 789 aa10.07□□□□□ -0.8
SPOCK1-201ENST00000282223 MSNP26038 577 aaKnown RBP10.07□□□□□ -0.8
SPOCK1-201ENST00000282223 PRKRIP1Q9H875 184 aaPredicted RBP10.07□□□□□ -0.8
SPOCK1-201ENST00000282223 NCLP19338 710 aaKnown RBP10.07□□□□□ -0.8
SPOCK1-201ENST00000282223 CANXP27824 592 aaKnown RBP10.07□□□□□ -0.8
SPOCK1-201ENST00000282223 CHMP4BQ9H444 224 aaKnown RBP10.06□□□□□ -0.8
SPOCK1-201ENST00000282223 KIAA1211Q6ZU35 1233 aa10.05□□□□□ -0.8
SPOCK1-201ENST00000282223 CHIC2Q9UKJ5 165 aa10.04□□□□□ -0.8
SPOCK1-201ENST00000282223 R3HCC1Q9Y3T6 440 aaKnown RBP10.04□□□□□ -0.8
SPOCK1-201ENST00000282223 CCDC88BA6NC98 1476 aa10.04□□□□□ -0.8
SPOCK1-201ENST00000282223 ESPNB1AK53 854 aa10.04□□□□□ -0.8
SPOCK1-201ENST00000282223 CCNB3Q8WWL7 1395 aa10.03□□□□□ -0.8
SPOCK1-201ENST00000282223 GOLGA3Q08378 1498 aa10.02□□□□□ -0.81
SPOCK1-201ENST00000282223 RRP1P56182 461 aaKnown RBP10.02□□□□□ -0.81
SPOCK1-201ENST00000282223 PAXIP1Q6ZW49 1069 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms