RNA–Protein interactions for RNA: ENST00000278616.8

ATM-201, Transcript of ATM serine/threonine kinase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene ATM, Length 13,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-201ENST00000278616 CHAF1AQ13111 956 aaPredicted RBP9.82□□□□□ -0.84
ATM-201ENST00000278616 RTN4Q9NQC3 1192 aaKnown RBP9.81□□□□□ -0.84
ATM-201ENST00000278616 CHGAP10645 457 aaKnown RBP9.81□□□□□ -0.84
ATM-201ENST00000278616 AMER1Q5JTC6 1135 aaPredicted RBP9.81□□□□□ -0.84
ATM-201ENST00000278616 PPM1GO15355 546 aaPredicted RBP9.78□□□□□ -0.84
ATM-201ENST00000278616 NRDCO43847 1150 aa9.78□□□□□ -0.84
ATM-201ENST00000278616 ESF1Q9H501 851 aaKnown RBP9.77□□□□□ -0.85
ATM-201ENST00000278616 STAG3Q9UJ98 1225 aa9.76□□□□□ -0.85
ATM-201ENST00000278616 MSNP26038 577 aaKnown RBP9.76□□□□□ -0.85
ATM-201ENST00000278616 MRS2Q9HD23 443 aa9.75□□□□□ -0.85
ATM-201ENST00000278616 PLCB2Q00722 1185 aa9.74□□□□□ -0.85
ATM-201ENST00000278616 A0A0G2JS52 829 aa9.73□□□□□ -0.85
ATM-201ENST00000278616 ZBTB7CA1YPR0 619 aa9.73□□□□□ -0.85
ATM-201ENST00000278616 TULP1O00294 542 aaPredicted RBP9.73□□□□□ -0.85
ATM-201ENST00000278616 KDM2AQ9Y2K7 1162 aa9.73□□□□□ -0.85
ATM-201ENST00000278616 TAOK2Q9UL54 1235 aa9.72□□□□□ -0.85
ATM-201ENST00000278616 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.72□□□□□ -0.853e-7■■□□□ 13.6
ATM-201ENST00000278616 MIER1Q8N108 512 aa9.72□□□□□ -0.85
ATM-201ENST00000278616 CHIC2Q9UKJ5 165 aa9.71□□□□□ -0.85
ATM-201ENST00000278616 L1TD1Q5T7N2 865 aaKnown RBP9.71□□□□□ -0.85
ATM-201ENST00000278616 NOP58Q9Y2X3 529 aaKnown RBP9.71□□□□□ -0.86
ATM-201ENST00000278616 FTSJ3Q8IY81 847 aaKnown RBP9.7□□□□□ -0.86
ATM-201ENST00000278616 DCAF1Q9Y4B6 1507 aa9.7□□□□□ -0.86
ATM-201ENST00000278616 CCDC180Q9P1Z9 1646 aa9.69□□□□□ -0.86
ATM-201ENST00000278616 HSP90AB1P08238 724 aaKnown RBP9.69□□□□□ -0.86
ATM-201ENST00000278616 TNNT3P45378 269 aaPredicted RBP9.69□□□□□ -0.86
ATM-201ENST00000278616 DRC7Q8IY82 874 aa9.68□□□□□ -0.86
ATM-201ENST00000278616 ABCC9O60706 1549 aa9.68□□□□□ -0.86
ATM-201ENST00000278616 LAS1LQ9Y4W2 734 aaKnown RBP9.67□□□□□ -0.86
ATM-201ENST00000278616 GOLGA6L4A6NEF3 574 aa9.64□□□□□ -0.87
ATM-201ENST00000278616 KIAA2012Q0VF49 1180 aa9.63□□□□□ -0.87
ATM-201ENST00000278616 NOC3LQ8WTT2 800 aaKnown RBP9.63□□□□□ -0.87
ATM-201ENST00000278616 FGD1P98174 961 aa9.63□□□□□ -0.87
ATM-201ENST00000278616 ARID4BQ4LE39 1312 aaPredicted RBP9.62□□□□□ -0.87
ATM-201ENST00000278616 HSCBQ8IWL3 235 aa9.61□□□□□ -0.87
ATM-201ENST00000278616 GOLGA6L1Q8N7Z2 621 aa9.61□□□□□ -0.87
ATM-201ENST00000278616 DEKP35659 375 aaKnown RBP9.6□□□□□ -0.87
ATM-201ENST00000278616 PTMSP20962 102 aa9.6□□□□□ -0.87
ATM-201ENST00000278616 EIF4G2P78344 907 aaKnown RBP eCLIP9.6□□□□□ -0.87
ATM-201ENST00000278616 SUPT16HQ9Y5B9 1047 aaKnown RBP9.6□□□□□ -0.87
ATM-201ENST00000278616 KCNJ4P48050 445 aa9.59□□□□□ -0.87
ATM-201ENST00000278616 CHMP4BQ9H444 224 aaKnown RBP9.59□□□□□ -0.87
ATM-201ENST00000278616 NCBP3Q53F19 620 aaKnown RBP9.59□□□□□ -0.87
ATM-201ENST00000278616 CLSTN1O94985 981 aa9.58□□□□□ -0.88
ATM-201ENST00000278616 NAP1L2Q9ULW6 460 aaPredicted RBP9.58□□□□□ -0.88
ATM-201ENST00000278616 CFAP53Q96M91 514 aa9.58□□□□□ -0.88
ATM-201ENST00000278616 C14orf37Q86TY3 774 aa9.58□□□□□ -0.88
ATM-201ENST00000278616 PNNQ9H307 717 aaKnown RBP9.58□□□□□ -0.88
ATM-201ENST00000278616 RGS3P49796 1198 aa9.57□□□□□ -0.88
ATM-201ENST00000278616 USP35Q9P2H5 1018 aa9.57□□□□□ -0.88
ATM-201ENST00000278616 ARID3AQ99856 593 aa9.56□□□□□ -0.88
ATM-201ENST00000278616 SETQ01105 290 aaPredicted RBP9.56□□□□□ -0.88
ATM-201ENST00000278616 PPP4R2Q9NY27 417 aa9.56□□□□□ -0.88
ATM-201ENST00000278616 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.56□□□□□ -0.88
ATM-201ENST00000278616 MCCP23508 829 aa9.55□□□□□ -0.88
ATM-201ENST00000278616 A0A0U1RQG5 324 aaPredicted RBP9.55□□□□□ -0.88
ATM-201ENST00000278616 KNSTRNQ9Y448 316 aa9.55□□□□□ -0.88
ATM-201ENST00000278616 SPRYD3Q8NCJ5 442 aa9.55□□□□□ -0.88
ATM-201ENST00000278616 CALRP27797 417 aaKnown RBP9.54□□□□□ -0.88
ATM-201ENST00000278616 CFAP44Q96MT7 982 aa9.54□□□□□ -0.88
ATM-201ENST00000278616 GNL2Q13823 731 aaKnown RBP9.54□□□□□ -0.88
ATM-201ENST00000278616 OS9Q13438 667 aaPredicted RBP9.54□□□□□ -0.88
ATM-201ENST00000278616 MS4A1P11836 297 aa9.54□□□□□ -0.88
ATM-201ENST00000278616 GOLGA2Q08379 1002 aa9.53□□□□□ -0.88
ATM-201ENST00000278616 SYAP1Q96A49 352 aaPredicted RBP9.53□□□□□ -0.88
ATM-201ENST00000278616 NEUROD2Q15784 382 aa9.52□□□□□ -0.88
ATM-201ENST00000278616 CSRNP3Q8WYN3 585 aa9.52□□□□□ -0.89
ATM-201ENST00000278616 RRP7BPQ9NSQ0 103 aa9.51□□□□□ -0.89
ATM-201ENST00000278616 GBP4Q96PP9 640 aa9.51□□□□□ -0.89
ATM-201ENST00000278616 MAPK8IP3Q9UPT6 1336 aa9.51□□□□□ -0.89
ATM-201ENST00000278616 CDCA8Q53HL2 280 aa9.5□□□□□ -0.89
ATM-201ENST00000278616 RGL3Q3MIN7 710 aa9.5□□□□□ -0.89
ATM-201ENST00000278616 NPHP1O15259 732 aa9.49□□□□□ -0.89
ATM-201ENST00000278616 FRAT1Q92837 279 aaPredicted RBP9.49□□□□□ -0.89
ATM-201ENST00000278616 MTUS2Q5JR59 1369 aa9.49□□□□□ -0.89
ATM-201ENST00000278616 TPM4P67936 248 aa9.48□□□□□ -0.89
ATM-201ENST00000278616 HSP90AA2PQ14568 343 aaPredicted RBP9.48□□□□□ -0.89
ATM-201ENST00000278616 GZF1Q9H116 711 aaPredicted RBP9.48□□□□□ -0.89
ATM-201ENST00000278616 TSPY4P0CV99 314 aa9.48□□□□□ -0.89
ATM-201ENST00000278616 TSPY10P0CW01 314 aa9.48□□□□□ -0.89
ATM-201ENST00000278616 NPM1P06748 294 aaKnown RBP eCLIP9.47□□□□□ -0.89
ATM-201ENST00000278616 HTATSF1O43719 755 aaKnown RBP9.47□□□□□ -0.89
ATM-201ENST00000278616 SCRIBQ14160 1630 aa9.46□□□□□ -0.89
ATM-201ENST00000278616 B4GALNT3Q6L9W6 998 aa9.46□□□□□ -0.89
ATM-201ENST00000278616 PPP1R15AO75807 674 aaPredicted RBP9.46□□□□□ -0.9
ATM-201ENST00000278616 MYO15BQ96JP2 1530 aa9.46□□□□□ -0.9
ATM-201ENST00000278616 PHF14O94880 888 aa9.45□□□□□ -0.9
ATM-201ENST00000278616 PRM3Q9NNZ6 103 aa9.45□□□□□ -0.9
ATM-201ENST00000278616 HAP1P54257 671 aaPredicted RBP9.45□□□□□ -0.9
ATM-201ENST00000278616 NUDCQ9Y266 331 aa9.44□□□□□ -0.9
ATM-201ENST00000278616 RSPH6AQ9H0K4 717 aa9.44□□□□□ -0.9
ATM-201ENST00000278616 KIAA1211Q6ZU35 1233 aa9.44□□□□□ -0.9
ATM-201ENST00000278616 CCDC34Q96HJ3 373 aa9.44□□□□□ -0.9
ATM-201ENST00000278616 GOLGA6L3A6NEY3 463 aa9.43□□□□□ -0.9
ATM-201ENST00000278616 CC2D1BQ5T0F9 858 aaKnown RBP9.43□□□□□ -0.9
ATM-201ENST00000278616 CSPP1Q1MSJ5 1256 aa9.42□□□□□ -0.9
ATM-201ENST00000278616 RBM19Q9Y4C8 960 aaKnown RBP9.42□□□□□ -0.9
ATM-201ENST00000278616 KCNH8Q96L42 1107 aa9.41□□□□□ -0.9
ATM-201ENST00000278616 GPS2Q13227 327 aa9.4□□□□□ -0.91
ATM-201ENST00000278616 CEP89Q96ST8 783 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms