RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 SENP3Q9H4L4 574 aaPredicted RBP14.04□□□□□ -0.16
OTOF-201ENST00000272371 P3H3Q8IVL6 736 aa14.03□□□□□ -0.16
OTOF-201ENST00000272371 MIER1Q8N108 512 aa14.02□□□□□ -0.16
OTOF-201ENST00000272371 AMER1Q5JTC6 1135 aaPredicted RBP14.01□□□□□ -0.17
OTOF-201ENST00000272371 TONSLQ96HA7 1378 aa14□□□□□ -0.17
OTOF-201ENST00000272371 NOP58Q9Y2X3 529 aaKnown RBP13.99□□□□□ -0.17
OTOF-201ENST00000272371 A0A0G2JS52 829 aa13.98□□□□□ -0.17
OTOF-201ENST00000272371 TMC1Q8TDI8 760 aa13.98□□□□□ -0.17
OTOF-201ENST00000272371 ZCCHC6Q5VYS8 1495 aaKnown RBP13.98□□□□□ -0.17
OTOF-201ENST00000272371 DCAF1Q9Y4B6 1507 aa13.98□□□□□ -0.17
OTOF-201ENST00000272371 DEKP35659 375 aaKnown RBP13.97□□□□□ -0.17
OTOF-201ENST00000272371 C14orf37Q86TY3 774 aa13.96□□□□□ -0.17
OTOF-201ENST00000272371 LAS1LQ9Y4W2 734 aaKnown RBP13.96□□□□□ -0.17
OTOF-201ENST00000272371 MRS2Q9HD23 443 aa13.93□□□□□ -0.18
OTOF-201ENST00000272371 WDR43Q15061 677 aaKnown RBP eCLIP13.9□□□□□ -0.18
OTOF-201ENST00000272371 MYH16Q9H6N6 1097 aa13.9□□□□□ -0.18
OTOF-201ENST00000272371 HAP1P54257 671 aaPredicted RBP13.89□□□□□ -0.19
OTOF-201ENST00000272371 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.88□□□□□ -0.19
OTOF-201ENST00000272371 NACADO15069 1562 aa13.85□□□□□ -0.19
OTOF-201ENST00000272371 ZRSR1Q15695 479 aaKnown RBP13.85□□□□□ -0.19
OTOF-201ENST00000272371 ZNF777Q9ULD5 760 aaPredicted RBP13.84□□□□□ -0.19
OTOF-201ENST00000272371 L1TD1Q5T7N2 865 aaKnown RBP13.84□□□□□ -0.19
OTOF-201ENST00000272371 MSNP26038 577 aaKnown RBP13.84□□□□□ -0.19
OTOF-201ENST00000272371 CHGAP10645 457 aaKnown RBP13.83□□□□□ -0.2
OTOF-201ENST00000272371 CHAF1AQ13111 956 aaPredicted RBP13.83□□□□□ -0.2
OTOF-201ENST00000272371 SUPT16HQ9Y5B9 1047 aaKnown RBP13.82□□□□□ -0.2
OTOF-201ENST00000272371 TPRNQ4KMQ1 711 aa13.81□□□□□ -0.2
OTOF-201ENST00000272371 PHF23Q9BUL5 403 aaPredicted RBP13.8□□□□□ -0.2
OTOF-201ENST00000272371 PLCB2Q00722 1185 aa13.79□□□□□ -0.2
OTOF-201ENST00000272371 GOLGA6L6A8MZA4 724 aa13.79□□□□□ -0.2
OTOF-201ENST00000272371 PPP4R2Q9NY27 417 aa13.79□□□□□ -0.2
OTOF-201ENST00000272371 PLEKHG5O94827 1062 aa13.77□□□□□ -0.2
OTOF-201ENST00000272371 KCNH8Q96L42 1107 aa13.77□□□□□ -0.21
OTOF-201ENST00000272371 CASC1Q6TDU7 716 aa13.76□□□□□ -0.21
OTOF-201ENST00000272371 CSRNP3Q8WYN3 585 aa13.74□□□□□ -0.21
OTOF-201ENST00000272371 DCAF8L1A6NGE4 600 aa13.73□□□□□ -0.21
OTOF-201ENST00000272371 TNNT3P45378 269 aaPredicted RBP13.73□□□□□ -0.21
OTOF-201ENST00000272371 HSP90AB1P08238 724 aaKnown RBP13.73□□□□□ -0.21
OTOF-201ENST00000272371 RBM19Q9Y4C8 960 aaKnown RBP13.72□□□□□ -0.21
OTOF-201ENST00000272371 HIRIP3Q9BW71 556 aaPredicted RBP13.71□□□□□ -0.21
OTOF-201ENST00000272371 ARID3AQ99856 593 aa13.71□□□□□ -0.22
OTOF-201ENST00000272371 NRDCO43847 1150 aa13.7□□□□□ -0.22
OTOF-201ENST00000272371 PNNQ9H307 717 aaKnown RBP13.68□□□□□ -0.22
OTOF-201ENST00000272371 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
OTOF-201ENST00000272371 PPP1R15AO75807 674 aaPredicted RBP13.66□□□□□ -0.22
OTOF-201ENST00000272371 RGS3P49796 1198 aa13.65□□□□□ -0.22
OTOF-201ENST00000272371 CYB5RLQ6IPT4 315 aa13.65□□□□□ -0.22
OTOF-201ENST00000272371 B4GALNT3Q6L9W6 998 aa13.64□□□□□ -0.23
OTOF-201ENST00000272371 EIF4G2P78344 907 aaKnown RBP eCLIP13.64□□□□□ -0.23
OTOF-201ENST00000272371 MLECQ14165 292 aa13.64□□□□□ -0.23
OTOF-201ENST00000272371 HSCBQ8IWL3 235 aa13.63□□□□□ -0.23
OTOF-201ENST00000272371 DRC7Q8IY82 874 aa13.63□□□□□ -0.23
OTOF-201ENST00000272371 FTSJ3Q8IY81 847 aaKnown RBP13.62□□□□□ -0.23
OTOF-201ENST00000272371 ZBTB7CA1YPR0 619 aa13.62□□□□□ -0.23
OTOF-201ENST00000272371 HSP90AA2PQ14568 343 aaPredicted RBP13.62□□□□□ -0.23
OTOF-201ENST00000272371 RSPH6AQ9H0K4 717 aa13.59□□□□□ -0.23
OTOF-201ENST00000272371 VSIG10Q8N0Z9 540 aa13.58□□□□□ -0.23
OTOF-201ENST00000272371 KDM2AQ9Y2K7 1162 aa13.58□□□□□ -0.24
OTOF-201ENST00000272371 SENP3-EIF4A1A0A087X0R7 540 aa13.58□□□□□ -0.24
OTOF-201ENST00000272371 KIAA2012Q0VF49 1180 aa13.57□□□□□ -0.24
OTOF-201ENST00000272371 PTMSP20962 102 aa13.57□□□□□ -0.24
OTOF-201ENST00000272371 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
OTOF-201ENST00000272371 SPRYD3Q8NCJ5 442 aa13.57□□□□□ -0.24
OTOF-201ENST00000272371 GOLGA6L4A6NEF3 574 aa13.54□□□□□ -0.24
OTOF-201ENST00000272371 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.54□□□□□ -0.24
OTOF-201ENST00000272371 TULP1O00294 542 aaPredicted RBP13.53□□□□□ -0.24
OTOF-201ENST00000272371 FOXD1Q16676 465 aa13.53□□□□□ -0.24
OTOF-201ENST00000272371 CECR2Q9BXF3 1484 aa13.53□□□□□ -0.24
OTOF-201ENST00000272371 GZF1Q9H116 711 aaPredicted RBP13.53□□□□□ -0.24
OTOF-201ENST00000272371 CHIC2Q9UKJ5 165 aa13.52□□□□□ -0.24
OTOF-201ENST00000272371 GOLGA6L3A6NEY3 463 aa13.52□□□□□ -0.25
OTOF-201ENST00000272371 GBP4Q96PP9 640 aa13.51□□□□□ -0.25
OTOF-201ENST00000272371 TSHZ2Q9NRE2 1034 aa13.51□□□□□ -0.25
OTOF-201ENST00000272371 MEX3CQ5U5Q3 659 aaKnown RBP13.5□□□□□ -0.25
OTOF-201ENST00000272371 LMOD2Q6P5Q4 547 aa13.48□□□□□ -0.25
OTOF-201ENST00000272371 TAOK2Q9UL54 1235 aa13.48□□□□□ -0.25
OTOF-201ENST00000272371 GOLGA6L1Q8N7Z2 621 aa13.48□□□□□ -0.25
OTOF-201ENST00000272371 FRAT1Q92837 279 aaPredicted RBP13.47□□□□□ -0.25
OTOF-201ENST00000272371 CFAP53Q96M91 514 aa13.46□□□□□ -0.26
OTOF-201ENST00000272371 FGD1P98174 961 aa13.46□□□□□ -0.26
OTOF-201ENST00000272371 SETQ01105 290 aaPredicted RBP13.45□□□□□ -0.26
OTOF-201ENST00000272371 CHMP4BQ9H444 224 aaKnown RBP13.45□□□□□ -0.26
OTOF-201ENST00000272371 IPO9Q96P70 1041 aaKnown RBP13.45□□□□□ -0.26
OTOF-201ENST00000272371 RSF1Q96T23 1441 aaPredicted RBP13.44□□□□□ -0.26
OTOF-201ENST00000272371 MS4A1P11836 297 aa13.44□□□□□ -0.26
OTOF-201ENST00000272371 MCCP23508 829 aa13.43□□□□□ -0.26
OTOF-201ENST00000272371 CCDC9Q9Y3X0 531 aaKnown RBP13.43□□□□□ -0.26
OTOF-201ENST00000272371 NAP1L2Q9ULW6 460 aaPredicted RBP13.43□□□□□ -0.26
OTOF-201ENST00000272371 KCNJ4P48050 445 aa13.43□□□□□ -0.26
OTOF-201ENST00000272371 BAZ1AQ9NRL2 1556 aaPredicted RBP13.42□□□□□ -0.26
OTOF-201ENST00000272371 CALRP27797 417 aaKnown RBP13.42□□□□□ -0.26
OTOF-201ENST00000272371 NOC3LQ8WTT2 800 aaKnown RBP13.42□□□□□ -0.26
OTOF-201ENST00000272371 SYAP1Q96A49 352 aaPredicted RBP13.42□□□□□ -0.26
OTOF-201ENST00000272371 SLKQ9H2G2 1235 aaPredicted RBP13.42□□□□□ -0.26
OTOF-201ENST00000272371 KNSTRNQ9Y448 316 aa13.41□□□□□ -0.26
OTOF-201ENST00000272371 CFAP44Q96MT7 982 aa13.4□□□□□ -0.26
OTOF-201ENST00000272371 NPHP1O15259 732 aa13.4□□□□□ -0.26
OTOF-201ENST00000272371 NEUROD2Q15784 382 aa13.39□□□□□ -0.27
OTOF-201ENST00000272371 TCERG1O14776 1098 aaKnown RBP13.39□□□□□ -0.27
OTOF-201ENST00000272371 TSPY4P0CV99 314 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms