RNA–Protein interactions for RNA: ENST00000264158.12

RAB3GAP1-201, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3GAP1, Length 4,914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-201ENST00000264158 CLSPNQ9HAW4 1339 aa12.83□□□□□ -0.36
RAB3GAP1-201ENST00000264158 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
RAB3GAP1-201ENST00000264158 HDGFP51858 240 aaKnown RBP12.82□□□□□ -0.36
RAB3GAP1-201ENST00000264158 CCDC9Q9Y3X0 531 aaKnown RBP12.82□□□□□ -0.36
RAB3GAP1-201ENST00000264158 NPHP1O15259 732 aa12.81□□□□□ -0.36
RAB3GAP1-201ENST00000264158 ARXQ96QS3 562 aa12.81□□□□□ -0.36
RAB3GAP1-201ENST00000264158 DDX10Q13206 875 aaKnown RBP12.8□□□□□ -0.36
RAB3GAP1-201ENST00000264158 CEP162Q5TB80 1403 aa12.79□□□□□ -0.36
RAB3GAP1-201ENST00000264158 MTUS2Q5JR59 1369 aa12.75□□□□□ -0.37
RAB3GAP1-201ENST00000264158 CLIP1P30622 1438 aa12.75□□□□□ -0.37
RAB3GAP1-201ENST00000264158 GGT6Q6P531 493 aa12.74□□□□□ -0.37
RAB3GAP1-201ENST00000264158 CFDP1Q9UEE9 299 aaPredicted RBP12.73□□□□□ -0.37
RAB3GAP1-201ENST00000264158 MEX3CQ5U5Q3 659 aaKnown RBP12.72□□□□□ -0.37
RAB3GAP1-201ENST00000264158 BAZ1AQ9NRL2 1556 aaPredicted RBP12.71□□□□□ -0.37
RAB3GAP1-201ENST00000264158 FAM69CQ0P6D2 419 aa12.7□□□□□ -0.38
RAB3GAP1-201ENST00000264158 HNRNPUQ00839 825 aaKnown RBP eCLIP12.69□□□□□ -0.38
RAB3GAP1-201ENST00000264158 TONSLQ96HA7 1378 aa12.69□□□□□ -0.38
RAB3GAP1-201ENST00000264158 KDM2AQ9Y2K7 1162 aa12.68□□□□□ -0.38
RAB3GAP1-201ENST00000264158 GOLGA3Q08378 1498 aa12.68□□□□□ -0.38
RAB3GAP1-201ENST00000264158 TNIKQ9UKE5 1360 aa12.67□□□□□ -0.38
RAB3GAP1-201ENST00000264158 EEA1Q15075 1411 aa12.67□□□□□ -0.38
RAB3GAP1-201ENST00000264158 POGKQ9P215 609 aa12.66□□□□□ -0.38
RAB3GAP1-201ENST00000264158 HIRIP3Q9BW71 556 aaPredicted RBP12.66□□□□□ -0.38
RAB3GAP1-201ENST00000264158 EID1Q9Y6B2 187 aa12.64□□□□□ -0.39
RAB3GAP1-201ENST00000264158 CANXP27824 592 aaKnown RBP12.63□□□□□ -0.39
RAB3GAP1-201ENST00000264158 FOXD1Q16676 465 aa12.63□□□□□ -0.39
RAB3GAP1-201ENST00000264158 CARMIL2Q6F5E8 1435 aa12.62□□□□□ -0.39
RAB3GAP1-201ENST00000264158 MROH2BQ7Z745 1585 aa12.61□□□□□ -0.39
RAB3GAP1-201ENST00000264158 FAM9BQ8IZU0 186 aa12.61□□□□□ -0.39
RAB3GAP1-201ENST00000264158 TMC1Q8TDI8 760 aa12.6□□□□□ -0.39
RAB3GAP1-201ENST00000264158 TDRD9Q8NDG6 1382 aaKnown RBP12.6□□□□□ -0.39
RAB3GAP1-201ENST00000264158 RGL3Q3MIN7 710 aa12.59□□□□□ -0.39
RAB3GAP1-201ENST00000264158 WRNQ14191 1432 aaPredicted RBP eCLIP12.59□□□□□ -0.39
RAB3GAP1-201ENST00000264158 ANP32AP39687 249 aaKnown RBP12.59□□□□□ -0.39
RAB3GAP1-201ENST00000264158 IRX6P78412 446 aaPredicted RBP12.57□□□□□ -0.4
RAB3GAP1-201ENST00000264158 EFCAB2Q5VUJ9 269 aa12.57□□□□□ -0.4
RAB3GAP1-201ENST00000264158 EIF4G1Q04637 1599 aaKnown RBP12.56□□□□□ -0.4
RAB3GAP1-201ENST00000264158 SOGA1O94964 1423 aa12.55□□□□□ -0.4
RAB3GAP1-201ENST00000264158 CSB-PGBD3P0DP91 1061 aa12.54□□□□□ -0.4
RAB3GAP1-201ENST00000264158 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
RAB3GAP1-201ENST00000264158 KANK1Q14678 1352 aa12.54□□□□□ -0.4
RAB3GAP1-201ENST00000264158 KIF27Q86VH2 1401 aa12.54□□□□□ -0.4
RAB3GAP1-201ENST00000264158 RRP7BPQ9NSQ0 103 aa12.53□□□□□ -0.4
RAB3GAP1-201ENST00000264158 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.4
RAB3GAP1-201ENST00000264158 PAK3O75914 559 aaPredicted RBP12.52□□□□□ -0.4
RAB3GAP1-201ENST00000264158 SUPT16HQ9Y5B9 1047 aaKnown RBP12.52□□□□□ -0.4
RAB3GAP1-201ENST00000264158 JPH4Q96JJ6 628 aa12.52□□□□□ -0.41
RAB3GAP1-201ENST00000264158 SOX12O15370 315 aa12.5□□□□□ -0.41
RAB3GAP1-201ENST00000264158 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
RAB3GAP1-201ENST00000264158 KLHL34Q8N239 644 aa12.49□□□□□ -0.41
RAB3GAP1-201ENST00000264158 SF3B2Q13435 895 aaKnown RBP12.49□□□□□ -0.41
RAB3GAP1-201ENST00000264158 ANP32EQ9BTT0 268 aa12.49□□□□□ -0.41
RAB3GAP1-201ENST00000264158 SMARCA2P51531 1590 aa12.48□□□□□ -0.41
RAB3GAP1-201ENST00000264158 TMX4Q9H1E5 349 aaPredicted RBP12.47□□□□□ -0.41
RAB3GAP1-201ENST00000264158 MSH5O43196 834 aa12.47□□□□□ -0.41
RAB3GAP1-201ENST00000264158 CCDC136Q96JN2 1154 aa12.47□□□□□ -0.41
RAB3GAP1-201ENST00000264158 SIN3AQ96ST3 1273 aa12.46□□□□□ -0.41
RAB3GAP1-201ENST00000264158 DNAJC5BQ9UF47 199 aa12.46□□□□□ -0.41
RAB3GAP1-201ENST00000264158 NBR1Q14596 966 aa12.46□□□□□ -0.41
RAB3GAP1-201ENST00000264158 SALL2Q9Y467 1007 aaPredicted RBP12.46□□□□□ -0.41
RAB3GAP1-201ENST00000264158 ABCC8Q09428 1581 aa12.46□□□□□ -0.41
RAB3GAP1-201ENST00000264158 CADPSQ9ULU8 1353 aa12.45□□□□□ -0.42
RAB3GAP1-201ENST00000264158 WIZO95785 1651 aa12.45□□□□□ -0.42
RAB3GAP1-201ENST00000264158 CCDC88BA6NC98 1476 aa12.45□□□□□ -0.42
RAB3GAP1-201ENST00000264158 CUX2O14529 1486 aa12.44□□□□□ -0.42
RAB3GAP1-201ENST00000264158 CCNB3Q8WWL7 1395 aa12.43□□□□□ -0.42
RAB3GAP1-201ENST00000264158 EIF4G2P78344 907 aaKnown RBP eCLIP12.43□□□□□ -0.42
RAB3GAP1-201ENST00000264158 SMARCA4P51532 1647 aa12.42□□□□□ -0.42
RAB3GAP1-201ENST00000264158 WASHC2CQ9Y4E1 1318 aa12.42□□□□□ -0.42
RAB3GAP1-201ENST00000264158 STK26Q9P289 416 aa12.42□□□□□ -0.42
RAB3GAP1-201ENST00000264158 KIF3BO15066 747 aa12.41□□□□□ -0.42
RAB3GAP1-201ENST00000264158 PIP4K2BP78356 416 aa12.41□□□□□ -0.42
RAB3GAP1-201ENST00000264158 SAFB2Q14151 953 aaKnown RBP eCLIP12.41□□□□□ -0.42
RAB3GAP1-201ENST00000264158 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.42
RAB3GAP1-201ENST00000264158 CARMIL1Q5VZK9 1371 aa12.4□□□□□ -0.42
RAB3GAP1-201ENST00000264158 VPS8Q8N3P4 1428 aa12.39□□□□□ -0.43
RAB3GAP1-201ENST00000264158 EVA1CP58658 441 aa12.37□□□□□ -0.43
RAB3GAP1-201ENST00000264158 TOP2AP11388 1531 aaKnown RBP12.36□□□□□ -0.43
RAB3GAP1-201ENST00000264158 SRPK2P78362 688 aaKnown RBP12.36□□□□□ -0.43
RAB3GAP1-201ENST00000264158 KANK4Q5T7N3 995 aaPredicted RBP12.36□□□□□ -0.43
RAB3GAP1-201ENST00000264158 PTPRGP23470 1445 aa12.35□□□□□ -0.43
RAB3GAP1-201ENST00000264158 SENP3-EIF4A1A0A087X0R7 540 aa12.35□□□□□ -0.43
RAB3GAP1-201ENST00000264158 SPAG9O60271 1321 aaKnown RBP12.35□□□□□ -0.43
RAB3GAP1-201ENST00000264158 ZNF330Q9Y3S2 320 aaPredicted RBP12.34□□□□□ -0.43
RAB3GAP1-201ENST00000264158 ATF3P18847 181 aa12.33□□□□□ -0.44
RAB3GAP1-201ENST00000264158 NGDNQ8NEJ9 315 aaKnown RBP12.33□□□□□ -0.44
RAB3GAP1-201ENST00000264158 NUTM2FA1L443 756 aa12.31□□□□□ -0.44
RAB3GAP1-201ENST00000264158 WDR43Q15061 677 aaKnown RBP eCLIP12.31□□□□□ -0.44
RAB3GAP1-201ENST00000264158 GOLGA2Q08379 1002 aa12.3□□□□□ -0.44
RAB3GAP1-201ENST00000264158 CDCA8Q53HL2 280 aa12.3□□□□□ -0.44
RAB3GAP1-201ENST00000264158 CFAP53Q96M91 514 aa12.29□□□□□ -0.44
RAB3GAP1-201ENST00000264158 G3V3G9 751 aa12.29□□□□□ -0.44
RAB3GAP1-201ENST00000264158 DCAF8Q5TAQ9 597 aa12.29□□□□□ -0.44
RAB3GAP1-201ENST00000264158 EIF5BO60841 1220 aaKnown RBP12.28□□□□□ -0.44
RAB3GAP1-201ENST00000264158 TSHZ2Q9NRE2 1034 aa12.28□□□□□ -0.44
RAB3GAP1-201ENST00000264158 PPP4R2Q9NY27 417 aa12.28□□□□□ -0.44
RAB3GAP1-201ENST00000264158 RBM19Q9Y4C8 960 aaKnown RBP12.28□□□□□ -0.44
RAB3GAP1-201ENST00000264158 NUTM2BA6NNL0 878 aaPredicted RBP12.27□□□□□ -0.44
RAB3GAP1-201ENST00000264158 NUTM2EB1AL46 878 aaPredicted RBP12.27□□□□□ -0.44
RAB3GAP1-201ENST00000264158 NUTM2AQ8IVF1 878 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms