RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 CHMP7Q8WUX9 453 aaPredicted RBP19.84■□□□□ 0.77
CCDC6-201ENST00000263102 TSPY4P0CV99 314 aa19.8■□□□□ 0.76
CCDC6-201ENST00000263102 TSPY10P0CW01 314 aa19.8■□□□□ 0.76
CCDC6-201ENST00000263102 FKBP8Q14318 412 aa19.79■□□□□ 0.76
CCDC6-201ENST00000263102 ZRSR1Q15695 479 aaKnown RBP19.74■□□□□ 0.75
CCDC6-201ENST00000263102 ISY1Q9ULR0 285 aaKnown RBP19.74■□□□□ 0.75
CCDC6-201ENST00000263102 NCLP19338 710 aaKnown RBP19.74■□□□□ 0.75
CCDC6-201ENST00000263102 LAS1LQ9Y4W2 734 aaKnown RBP19.73■□□□□ 0.75
CCDC6-201ENST00000263102 GOLGA2Q08379 1002 aa19.72■□□□□ 0.75
CCDC6-201ENST00000263102 NBR1Q14596 966 aa19.72■□□□□ 0.75
CCDC6-201ENST00000263102 DDX10Q13206 875 aaKnown RBP19.71■□□□□ 0.75
CCDC6-201ENST00000263102 CCDC136Q96JN2 1154 aa19.7■□□□□ 0.74
CCDC6-201ENST00000263102 SENP3-EIF4A1A0A087X0R7 540 aa19.66■□□□□ 0.74
CCDC6-201ENST00000263102 NAP1L2Q9ULW6 460 aaPredicted RBP19.65■□□□□ 0.74
CCDC6-201ENST00000263102 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.74
CCDC6-201ENST00000263102 RGL3Q3MIN7 710 aa19.64■□□□□ 0.73
CCDC6-201ENST00000263102 MLECQ14165 292 aa19.61■□□□□ 0.73
CCDC6-201ENST00000263102 SOX12O15370 315 aa19.6■□□□□ 0.73
CCDC6-201ENST00000263102 OS9Q13438 667 aaPredicted RBP19.6■□□□□ 0.73
CCDC6-201ENST00000263102 IRX6P78412 446 aaPredicted RBP19.59■□□□□ 0.73
CCDC6-201ENST00000263102 MRS2Q9HD23 443 aa19.59■□□□□ 0.73
CCDC6-201ENST00000263102 PRM3Q9NNZ6 103 aa19.57■□□□□ 0.72
CCDC6-201ENST00000263102 POGKQ9P215 609 aa19.56■□□□□ 0.72
CCDC6-201ENST00000263102 HIRIP3Q9BW71 556 aaPredicted RBP19.55■□□□□ 0.72
CCDC6-201ENST00000263102 NEUROD2Q15784 382 aa19.55■□□□□ 0.72
CCDC6-201ENST00000263102 CASC1Q6TDU7 716 aa19.55■□□□□ 0.72
CCDC6-201ENST00000263102 FGD1P98174 961 aa19.53■□□□□ 0.72
CCDC6-201ENST00000263102 CFAP53Q96M91 514 aa19.53■□□□□ 0.72
CCDC6-201ENST00000263102 CCDC9Q9Y3X0 531 aaKnown RBP19.53■□□□□ 0.72
CCDC6-201ENST00000263102 RRP7BPQ9NSQ0 103 aa19.52■□□□□ 0.72
CCDC6-201ENST00000263102 PTMAP06454 111 aaKnown RBP19.52■□□□□ 0.72
CCDC6-201ENST00000263102 TNNT2P45379 298 aaPredicted RBP19.51■□□□□ 0.71
CCDC6-201ENST00000263102 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.5■□□□□ 0.71
CCDC6-201ENST00000263102 GLIPR1L2Q4G1C9 344 aa19.49■□□□□ 0.71
CCDC6-201ENST00000263102 FTSJ3Q8IY81 847 aaKnown RBP19.48■□□□□ 0.71
CCDC6-201ENST00000263102 PLCB2Q00722 1185 aa19.47■□□□□ 0.71
CCDC6-201ENST00000263102 AMER1Q5JTC6 1135 aaPredicted RBP19.47■□□□□ 0.71
CCDC6-201ENST00000263102 ZNF330Q9Y3S2 320 aaPredicted RBP19.47■□□□□ 0.71
CCDC6-201ENST00000263102 MTUS2Q5JR59 1369 aa19.47■□□□□ 0.71
CCDC6-201ENST00000263102 MAPK8IP3Q9UPT6 1336 aa19.46■□□□□ 0.71
CCDC6-201ENST00000263102 GOLGA6L22H0YM25 854 aa19.45■□□□□ 0.7
CCDC6-201ENST00000263102 KCNJ4P48050 445 aa19.45■□□□□ 0.7
CCDC6-201ENST00000263102 TRIM44Q96DX7 344 aaPredicted RBP19.44■□□□□ 0.7
CCDC6-201ENST00000263102 PLEKHD1A6NEE1 506 aa19.43■□□□□ 0.7
CCDC6-201ENST00000263102 DNTTIP2Q5QJE6 756 aaKnown RBP19.43■□□□□ 0.7
CCDC6-201ENST00000263102 TMX4Q9H1E5 349 aaPredicted RBP19.41■□□□□ 0.7
CCDC6-201ENST00000263102 BECN1Q14457 450 aa19.41■□□□□ 0.7
CCDC6-201ENST00000263102 KNSTRNQ9Y448 316 aa19.38■□□□□ 0.69
CCDC6-201ENST00000263102 U2SURPO15042 1029 aaKnown RBP19.37■□□□□ 0.69
CCDC6-201ENST00000263102 CSB-PGBD3P0DP91 1061 aa19.35■□□□□ 0.69
CCDC6-201ENST00000263102 EIF4G2P78344 907 aaKnown RBP eCLIP19.35■□□□□ 0.69
CCDC6-201ENST00000263102 PAK3O75914 559 aaPredicted RBP19.33■□□□□ 0.68
CCDC6-201ENST00000263102 PDE4CQ08493 712 aa19.32■□□□□ 0.68
CCDC6-201ENST00000263102 KRI1Q8N9T8 703 aaKnown RBP19.32■□□□□ 0.68
CCDC6-201ENST00000263102 FRAT1Q92837 279 aaPredicted RBP19.32■□□□□ 0.68
CCDC6-201ENST00000263102 G3V3G9 751 aa19.32■□□□□ 0.68
CCDC6-201ENST00000263102 DCAF8Q5TAQ9 597 aa19.32■□□□□ 0.68
CCDC6-201ENST00000263102 NUDCQ9Y266 331 aa19.32■□□□□ 0.68
CCDC6-201ENST00000263102 SAFB2Q14151 953 aaKnown RBP eCLIP19.31■□□□□ 0.68
CCDC6-201ENST00000263102 ACIN1Q9UKV3 1341 aaKnown RBP19.31■□□□□ 0.68
CCDC6-201ENST00000263102 GOLGA6L6A8MZA4 724 aa19.28■□□□□ 0.68
CCDC6-201ENST00000263102 SCRIBQ14160 1630 aa19.28■□□□□ 0.68
CCDC6-201ENST00000263102 AEBP2Q6ZN18 517 aaPredicted RBP19.27■□□□□ 0.68
CCDC6-201ENST00000263102 ANO8Q9HCE9 1232 aaPredicted RBP19.27■□□□□ 0.67
CCDC6-201ENST00000263102 GNL2Q13823 731 aaKnown RBP19.26■□□□□ 0.67
CCDC6-201ENST00000263102 CDCA8Q53HL2 280 aa19.24■□□□□ 0.67
CCDC6-201ENST00000263102 DDRGK1Q96HY6 314 aa19.22■□□□□ 0.67
CCDC6-201ENST00000263102 ERCC6Q03468 1493 aa19.22■□□□□ 0.67
CCDC6-201ENST00000263102 CC2D1BQ5T0F9 858 aaKnown RBP19.22■□□□□ 0.67
CCDC6-201ENST00000263102 SRPK2P78362 688 aaKnown RBP19.21■□□□□ 0.67
CCDC6-201ENST00000263102 CFDP1Q9UEE9 299 aaPredicted RBP19.21■□□□□ 0.67
CCDC6-201ENST00000263102 CARD11Q9BXL7 1154 aa19.21■□□□□ 0.67
CCDC6-201ENST00000263102 GOLGA6L4A6NEF3 574 aa19.2■□□□□ 0.66
CCDC6-201ENST00000263102 HSP90AB1P08238 724 aaKnown RBP19.18■□□□□ 0.66
CCDC6-201ENST00000263102 HDGFP51858 240 aaKnown RBP19.18■□□□□ 0.66
CCDC6-201ENST00000263102 RGS3P49796 1198 aa19.18■□□□□ 0.66
CCDC6-201ENST00000263102 MSH5O43196 834 aa19.18■□□□□ 0.66
CCDC6-201ENST00000263102 STK26Q9P289 416 aa19.18■□□□□ 0.66
CCDC6-201ENST00000263102 ERICH6BQ5W0A0 696 aa19.17■□□□□ 0.66
CCDC6-201ENST00000263102 RTF1Q92541 710 aaKnown RBP19.17■□□□□ 0.66
CCDC6-201ENST00000263102 APBB1O00213 710 aa19.16■□□□□ 0.66
CCDC6-201ENST00000263102 PNNQ9H307 717 aaKnown RBP19.15■□□□□ 0.66
CCDC6-201ENST00000263102 CHMP3Q9Y3E7 222 aa19.14■□□□□ 0.66
CCDC6-201ENST00000263102 KLHL34Q8N239 644 aa19.13■□□□□ 0.65
CCDC6-201ENST00000263102 PHF23Q9BUL5 403 aaPredicted RBP19.13■□□□□ 0.65
CCDC6-201ENST00000263102 VPS53Q5VIR6 699 aa19.12■□□□□ 0.65
CCDC6-201ENST00000263102 NOC3LQ8WTT2 800 aaKnown RBP19.11■□□□□ 0.65
CCDC6-201ENST00000263102 KIAA2012Q0VF49 1180 aa19.1■□□□□ 0.65
CCDC6-201ENST00000263102 NRDCO43847 1150 aa19.1■□□□□ 0.65
CCDC6-201ENST00000263102 DRC7Q8IY82 874 aa19.1■□□□□ 0.65
CCDC6-201ENST00000263102 ANP32EQ9BTT0 268 aa19.09■□□□□ 0.65
CCDC6-201ENST00000263102 GGT6Q6P531 493 aa19.08■□□□□ 0.65
CCDC6-201ENST00000263102 FBXO3Q9UK99 471 aa19.08■□□□□ 0.64
CCDC6-201ENST00000263102 TAF7LQ5H9L4 462 aa19.07■□□□□ 0.64
CCDC6-201ENST00000263102 GORABQ5T7V8 394 aa19.06■□□□□ 0.64
CCDC6-201ENST00000263102 MEX3CQ5U5Q3 659 aaKnown RBP19.05■□□□□ 0.64
CCDC6-201ENST00000263102 SPRYD3Q8NCJ5 442 aa19.05■□□□□ 0.64
CCDC6-201ENST00000263102 WWC1Q8IX03 1113 aa19.05■□□□□ 0.64
CCDC6-201ENST00000263102 GTF2E1P29083 439 aaPredicted RBP19.04■□□□□ 0.64
CCDC6-201ENST00000263102 CHMP4BQ9H444 224 aaKnown RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms