RNA–Protein interactions for RNA: ENST00000261590.12

DSG2-201, Transcript of desmoglein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG2, Length 5,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG2-201ENST00000261590 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.32■■■□□ 2.28
DSG2-201ENST00000261590 KDM2AQ9Y2K7 1162 aa29.3■■■□□ 2.28
DSG2-201ENST00000261590 RTN4Q9NQC3 1192 aaKnown RBP29.26■■■□□ 2.27
DSG2-201ENST00000261590 CHIC2Q9UKJ5 165 aa29.25■■■□□ 2.27
DSG2-201ENST00000261590 PPM1GO15355 546 aaPredicted RBP29.24■■■□□ 2.27
DSG2-201ENST00000261590 MIER1Q8N108 512 aa29.24■■■□□ 2.27
DSG2-201ENST00000261590 TULP1O00294 542 aaPredicted RBP29.23■■■□□ 2.27
DSG2-201ENST00000261590 CASC1Q6TDU7 716 aa29.21■■■□□ 2.27
DSG2-201ENST00000261590 ZBTB7CA1YPR0 619 aa29.19■■■□□ 2.26
DSG2-201ENST00000261590 PLCB2Q00722 1185 aa29.17■■■□□ 2.26
DSG2-201ENST00000261590 HIRIP3Q9BW71 556 aaPredicted RBP29.14■■■□□ 2.26
DSG2-201ENST00000261590 LAS1LQ9Y4W2 734 aaKnown RBP29.12■■■□□ 2.25
DSG2-201ENST00000261590 GOLGA6L6A8MZA4 724 aa29.09■■■□□ 2.25
DSG2-201ENST00000261590 PLEKHG5O94827 1062 aa29.08■■■□□ 2.25
DSG2-201ENST00000261590 NPM1P06748 294 aaKnown RBP eCLIP29.07■■■□□ 2.24
DSG2-201ENST00000261590 C14orf37Q86TY3 774 aa29.06■■■□□ 2.24
DSG2-201ENST00000261590 EIF4G2P78344 907 aaKnown RBP eCLIP29.05■■■□□ 2.24
DSG2-201ENST00000261590 FTSJ3Q8IY81 847 aaKnown RBP29.02■■■□□ 2.24
DSG2-201ENST00000261590 TSPY4P0CV99 314 aa28.99■■■□□ 2.23
DSG2-201ENST00000261590 TSPY10P0CW01 314 aa28.99■■■□□ 2.23
DSG2-201ENST00000261590 TAOK2Q9UL54 1235 aa28.98■■■□□ 2.23
DSG2-201ENST00000261590 NRDCO43847 1150 aa28.98■■■□□ 2.23
DSG2-201ENST00000261590 AMER1Q5JTC6 1135 aaPredicted RBP28.97■■■□□ 2.23
DSG2-201ENST00000261590 SENP3-EIF4A1A0A087X0R7 540 aa28.96■■■□□ 2.23
DSG2-201ENST00000261590 NOP58Q9Y2X3 529 aaKnown RBP28.95■■■□□ 2.22
DSG2-201ENST00000261590 CFAP53Q96M91 514 aa28.94■■■□□ 2.22
DSG2-201ENST00000261590 SUPT16HQ9Y5B9 1047 aaKnown RBP28.93■■■□□ 2.22
DSG2-201ENST00000261590 HSP90AB1P08238 724 aaKnown RBP28.93■■■□□ 2.22
DSG2-201ENST00000261590 SENP3Q9H4L4 574 aaPredicted RBP28.93■■■□□ 2.22
DSG2-201ENST00000261590 CHAF1AQ13111 956 aaPredicted RBP28.92■■■□□ 2.22
DSG2-201ENST00000261590 RGS3P49796 1198 aa28.91■■■□□ 2.22
DSG2-201ENST00000261590 ABCC9O60706 1549 aa28.85■■■□□ 2.21
DSG2-201ENST00000261590 FGD1P98174 961 aa28.85■■■□□ 2.21
DSG2-201ENST00000261590 PPP1R15AO75807 674 aaPredicted RBP28.83■■■□□ 2.21
DSG2-201ENST00000261590 MSNP26038 577 aaKnown RBP28.82■■■□□ 2.2
DSG2-201ENST00000261590 DCAF1Q9Y4B6 1507 aa28.82■■■□□ 2.2
DSG2-201ENST00000261590 PPP4R2Q9NY27 417 aa28.79■■■□□ 2.2
DSG2-201ENST00000261590 GOLGA6L4A6NEF3 574 aa28.79■■■□□ 2.2
DSG2-201ENST00000261590 NEUROD2Q15784 382 aa28.78■■■□□ 2.2
DSG2-201ENST00000261590 KNSTRNQ9Y448 316 aa28.78■■■□□ 2.2
DSG2-201ENST00000261590 NAP1L2Q9ULW6 460 aaPredicted RBP28.78■■■□□ 2.2
DSG2-201ENST00000261590 MTUS2Q5JR59 1369 aa28.76■■■□□ 2.19
DSG2-201ENST00000261590 KCNJ4P48050 445 aa28.75■■■□□ 2.19
DSG2-201ENST00000261590 FRAT1Q92837 279 aaPredicted RBP28.75■■■□□ 2.19
DSG2-201ENST00000261590 MAPK8IP3Q9UPT6 1336 aa28.74■■■□□ 2.19
DSG2-201ENST00000261590 HAP1P54257 671 aaPredicted RBP28.74■■■□□ 2.19
DSG2-201ENST00000261590 L1TD1Q5T7N2 865 aaKnown RBP28.74■■■□□ 2.19
DSG2-201ENST00000261590 OS9Q13438 667 aaPredicted RBP28.73■■■□□ 2.19
DSG2-201ENST00000261590 DRC7Q8IY82 874 aa28.71■■■□□ 2.19
DSG2-201ENST00000261590 RRP7BPQ9NSQ0 103 aa28.71■■■□□ 2.19
DSG2-201ENST00000261590 ARID4BQ4LE39 1312 aaPredicted RBP28.71■■■□□ 2.19
DSG2-201ENST00000261590 HSCBQ8IWL3 235 aa28.7■■■□□ 2.18
DSG2-201ENST00000261590 CDCA8Q53HL2 280 aa28.69■■■□□ 2.18
DSG2-201ENST00000261590 CHMP4BQ9H444 224 aaKnown RBP28.68■■■□□ 2.18
DSG2-201ENST00000261590 NCBP3Q53F19 620 aaKnown RBP28.68■■■□□ 2.18
DSG2-201ENST00000261590 RGL3Q3MIN7 710 aa28.67■■■□□ 2.18
DSG2-201ENST00000261590 DEKP35659 375 aaKnown RBP28.64■■■□□ 2.18
DSG2-201ENST00000261590 CLSTN1O94985 981 aa28.63■■■□□ 2.17
DSG2-201ENST00000261590 NUDCQ9Y266 331 aa28.62■■■□□ 2.17
DSG2-201ENST00000261590 NPHP1O15259 732 aa28.6■■■□□ 2.17
DSG2-201ENST00000261590 MS4A1P11836 297 aa28.6■■■□□ 2.17
DSG2-201ENST00000261590 PNNQ9H307 717 aaKnown RBP28.58■■■□□ 2.16
DSG2-201ENST00000261590 SPRYD3Q8NCJ5 442 aa28.57■■■□□ 2.16
DSG2-201ENST00000261590 B4GALNT3Q6L9W6 998 aa28.56■■■□□ 2.16
DSG2-201ENST00000261590 GOLGA2Q08379 1002 aa28.54■■■□□ 2.16
DSG2-201ENST00000261590 CARD11Q9BXL7 1154 aa28.54■■■□□ 2.16
DSG2-201ENST00000261590 MCCP23508 829 aa28.52■■■□□ 2.16
DSG2-201ENST00000261590 ARID3AQ99856 593 aa28.51■■■□□ 2.15
DSG2-201ENST00000261590 TNNT3P45378 269 aaPredicted RBP28.48■■■□□ 2.15
DSG2-201ENST00000261590 KIAA2012Q0VF49 1180 aa28.44■■■□□ 2.14
DSG2-201ENST00000261590 U2SURPO15042 1029 aaKnown RBP28.43■■■□□ 2.14
DSG2-201ENST00000261590 NOC3LQ8WTT2 800 aaKnown RBP28.43■■■□□ 2.14
DSG2-201ENST00000261590 LMOD2Q6P5Q4 547 aa28.42■■■□□ 2.14
DSG2-201ENST00000261590 GNL2Q13823 731 aaKnown RBP28.41■■■□□ 2.14
DSG2-201ENST00000261590 CC2D1BQ5T0F9 858 aaKnown RBP28.41■■■□□ 2.14
DSG2-201ENST00000261590 KCNH8Q96L42 1107 aa28.38■■■□□ 2.13
DSG2-201ENST00000261590 ISY1Q9ULR0 285 aaKnown RBP28.36■■■□□ 2.13
DSG2-201ENST00000261590 POGKQ9P215 609 aa28.35■■■□□ 2.13
DSG2-201ENST00000261590 CLIP1P30622 1438 aa28.34■■■□□ 2.13
DSG2-201ENST00000261590 CFAP44Q96MT7 982 aa28.34■■■□□ 2.13
DSG2-201ENST00000261590 GBP4Q96PP9 640 aa28.34■■■□□ 2.13
DSG2-201ENST00000261590 PTMSP20962 102 aa28.33■■■□□ 2.13
DSG2-201ENST00000261590 GZF1Q9H116 711 aaPredicted RBP28.32■■■□□ 2.12
DSG2-201ENST00000261590 CHMP7Q8WUX9 453 aaPredicted RBP28.31■■■□□ 2.12
DSG2-201ENST00000261590 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.3■■■□□ 2.12
DSG2-201ENST00000261590 RBM19Q9Y4C8 960 aaKnown RBP28.27■■■□□ 2.12
DSG2-201ENST00000261590 RSF1Q96T23 1441 aaPredicted RBP28.27■■■□□ 2.12
DSG2-201ENST00000261590 PLEKHD1A6NEE1 506 aa28.26■■■□□ 2.11
DSG2-201ENST00000261590 KIAA1211Q6ZU35 1233 aa28.24■■■□□ 2.11
DSG2-201ENST00000261590 GOLGA6L1Q8N7Z2 621 aa28.24■■■□□ 2.11
DSG2-201ENST00000261590 A0A0U1RQG5 324 aaPredicted RBP28.22■■■□□ 2.11
DSG2-201ENST00000261590 SYAP1Q96A49 352 aaPredicted RBP28.21■■■□□ 2.11
DSG2-201ENST00000261590 HTATSF1O43719 755 aaKnown RBP28.21■■■□□ 2.11
DSG2-201ENST00000261590 APBB1O00213 710 aa28.2■■■□□ 2.11
DSG2-201ENST00000261590 SLKQ9H2G2 1235 aaPredicted RBP28.19■■■□□ 2.1
DSG2-201ENST00000261590 TPM4P67936 248 aa28.19■■■□□ 2.1
DSG2-201ENST00000261590 PRM3Q9NNZ6 103 aa28.16■■■□□ 2.1
DSG2-201ENST00000261590 GOLGA6L3A6NEY3 463 aa28.15■■■□□ 2.1
DSG2-201ENST00000261590 CFDP1Q9UEE9 299 aaPredicted RBP28.15■■■□□ 2.1
DSG2-201ENST00000261590 SIN3AQ96ST3 1273 aa28.13■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms