RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 KANK1Q14678 1352 aa5.4□□□□□ -1.54
RNF38-201ENST00000259605 CDCA8Q53HL2 280 aa5.4□□□□□ -1.54
RNF38-201ENST00000259605 CSB-PGBD3P0DP91 1061 aa5.39□□□□□ -1.55
RNF38-201ENST00000259605 FKBP8Q14318 412 aa5.39□□□□□ -1.55
RNF38-201ENST00000259605 NEUROD1Q13562 356 aa5.39□□□□□ -1.55
RNF38-201ENST00000259605 CFAP53Q96M91 514 aa5.39□□□□□ -1.55
RNF38-201ENST00000259605 OSCARQ8IYS5 282 aa5.38□□□□□ -1.55
RNF38-201ENST00000259605 RB1CC1Q8TDY2 1594 aa5.38□□□□□ -1.55
RNF38-201ENST00000259605 EIF5BO60841 1220 aaKnown RBP5.37□□□□□ -1.55
RNF38-201ENST00000259605 DNAJC5Q9H3Z4 198 aa5.37□□□□□ -1.55
RNF38-201ENST00000259605 ANP32CO43423 234 aa5.37□□□□□ -1.55
RNF38-201ENST00000259605 MSH5O43196 834 aa5.36□□□□□ -1.55
RNF38-201ENST00000259605 SCRIBQ14160 1630 aa5.35□□□□□ -1.55
RNF38-201ENST00000259605 MTUS2Q5JR59 1369 aa5.35□□□□□ -1.55
RNF38-201ENST00000259605 HSP90AA1P07900 732 aaKnown RBP5.35□□□□□ -1.55
RNF38-201ENST00000259605 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.35□□□□□ -1.55
RNF38-201ENST00000259605 ANP32EQ9BTT0 268 aa5.35□□□□□ -1.55
RNF38-201ENST00000259605 PNNQ9H307 717 aaKnown RBP5.35□□□□□ -1.55
RNF38-201ENST00000259605 UPF2Q9HAU5 1272 aaKnown RBP5.35□□□□□ -1.55
RNF38-201ENST00000259605 CWC22Q9HCG8 908 aaKnown RBP5.35□□□□□ -1.55
RNF38-201ENST00000259605 WDR43Q15061 677 aaKnown RBP eCLIP5.35□□□□□ -1.55
RNF38-201ENST00000259605 RTL5Q5HYW3 569 aaPredicted RBP5.35□□□□□ -1.55
RNF38-201ENST00000259605 ISY1Q9ULR0 285 aaKnown RBP5.35□□□□□ -1.55
RNF38-201ENST00000259605 SRPK2P78362 688 aaKnown RBP5.34□□□□□ -1.55
RNF38-201ENST00000259605 KLHL34Q8N239 644 aa5.34□□□□□ -1.55
RNF38-201ENST00000259605 PPARGC1BQ86YN6 1023 aaKnown RBP5.34□□□□□ -1.55
RNF38-201ENST00000259605 NUDCQ9Y266 331 aa5.34□□□□□ -1.55
RNF38-201ENST00000259605 RSF1Q96T23 1441 aaPredicted RBP5.34□□□□□ -1.55
RNF38-201ENST00000259605 GTF2E1P29083 439 aaPredicted RBP5.34□□□□□ -1.56
RNF38-201ENST00000259605 TMC1Q8TDI8 760 aa5.33□□□□□ -1.56
RNF38-201ENST00000259605 ANP32BQ92688 251 aaKnown RBP5.33□□□□□ -1.56
RNF38-201ENST00000259605 CARMIL2Q6F5E8 1435 aa5.33□□□□□ -1.56
RNF38-201ENST00000259605 WDHD1O75717 1129 aaPredicted RBP5.33□□□□□ -1.56
RNF38-201ENST00000259605 PDS5BQ9NTI5 1447 aa5.33□□□□□ -1.56
RNF38-201ENST00000259605 CFDP1Q9UEE9 299 aaPredicted RBP5.32□□□□□ -1.56
RNF38-201ENST00000259605 TULP1O00294 542 aaPredicted RBP5.32□□□□□ -1.56
RNF38-201ENST00000259605 CLSTN1O94985 981 aa5.32□□□□□ -1.56
RNF38-201ENST00000259605 CHMP4BQ9H444 224 aaKnown RBP5.32□□□□□ -1.56
RNF38-201ENST00000259605 CYB5RLQ6IPT4 315 aa5.31□□□□□ -1.56
RNF38-201ENST00000259605 EVA1CP58658 441 aa5.31□□□□□ -1.56
RNF38-201ENST00000259605 ZRSR1Q15695 479 aaKnown RBP5.3□□□□□ -1.56
RNF38-201ENST00000259605 HDAC5Q9UQL6 1122 aa5.3□□□□□ -1.56
RNF38-201ENST00000259605 TRIM26Q12899 539 aaPredicted RBP5.3□□□□□ -1.56
RNF38-201ENST00000259605 KCNA4P22459 653 aa5.3□□□□□ -1.56
RNF38-201ENST00000259605 TONSLQ96HA7 1378 aa5.3□□□□□ -1.56
RNF38-201ENST00000259605 PPP1R1BQ9UD71 204 aaPredicted RBP5.3□□□□□ -1.56
RNF38-201ENST00000259605 CTDP1Q9Y5B0 961 aaPredicted RBP5.3□□□□□ -1.56
RNF38-201ENST00000259605 MAPK8IP3Q9UPT6 1336 aa5.29□□□□□ -1.56
RNF38-201ENST00000259605 PAK3O75914 559 aaPredicted RBP5.29□□□□□ -1.56
RNF38-201ENST00000259605 NCBP3Q53F19 620 aaKnown RBP5.29□□□□□ -1.56
RNF38-201ENST00000259605 EFCAB2Q5VUJ9 269 aa5.29□□□□□ -1.56
RNF38-201ENST00000259605 CNKSR2Q8WXI2 1034 aa5.29□□□□□ -1.56
RNF38-201ENST00000259605 DMRT2Q9Y5R5 561 aa5.29□□□□□ -1.56
RNF38-201ENST00000259605 CLIP1P30622 1438 aa5.29□□□□□ -1.56
RNF38-201ENST00000259605 PPM1GO15355 546 aaPredicted RBP5.28□□□□□ -1.56
RNF38-201ENST00000259605 PRM3Q9NNZ6 103 aa5.28□□□□□ -1.56
RNF38-201ENST00000259605 GGT6Q6P531 493 aa5.28□□□□□ -1.56
RNF38-201ENST00000259605 ATF3P18847 181 aa5.27□□□□□ -1.57
RNF38-201ENST00000259605 OS9Q13438 667 aaPredicted RBP5.27□□□□□ -1.57
RNF38-201ENST00000259605 RTF1Q92541 710 aaKnown RBP5.27□□□□□ -1.57
RNF38-201ENST00000259605 CASC1Q6TDU7 716 aa5.26□□□□□ -1.57
RNF38-201ENST00000259605 KDM2AQ9Y2K7 1162 aa5.26□□□□□ -1.57
RNF38-201ENST00000259605 HDGFL2Q7Z4V5 671 aaPredicted RBP5.26□□□□□ -1.57
RNF38-201ENST00000259605 TRIM34Q9BYJ4 488 aa5.26□□□□□ -1.57
RNF38-201ENST00000259605 CCAR1Q8IX12 1150 aaKnown RBP5.25□□□□□ -1.57
RNF38-201ENST00000259605 ZNF710Q8N1W2 664 aa5.25□□□□□ -1.57
RNF38-201ENST00000259605 CHIC2Q9UKJ5 165 aa5.25□□□□□ -1.57
RNF38-201ENST00000259605 HRCP23327 699 aa5.25□□□□□ -1.57
RNF38-201ENST00000259605 ZNF330Q9Y3S2 320 aaPredicted RBP5.25□□□□□ -1.57
RNF38-201ENST00000259605 NCLP19338 710 aaKnown RBP5.24□□□□□ -1.57
RNF38-201ENST00000259605 MAP3K9P80192 1104 aa5.24□□□□□ -1.57
RNF38-201ENST00000259605 FGD1P98174 961 aa5.24□□□□□ -1.57
RNF38-201ENST00000259605 NGDNQ8NEJ9 315 aaKnown RBP5.24□□□□□ -1.57
RNF38-201ENST00000259605 TAF7LQ5H9L4 462 aa5.24□□□□□ -1.57
RNF38-201ENST00000259605 NOL10Q9BSC4 688 aaKnown RBP5.24□□□□□ -1.57
RNF38-201ENST00000259605 BAZ1BQ9UIG0 1483 aaKnown RBP5.24□□□□□ -1.57
RNF38-201ENST00000259605 DIEXFQ68CQ4 756 aaKnown RBP5.24□□□□□ -1.57
RNF38-201ENST00000259605 FRAT2O75474 233 aaPredicted RBP5.24□□□□□ -1.57
RNF38-201ENST00000259605 KNSTRNQ9Y448 316 aa5.23□□□□□ -1.57
RNF38-201ENST00000259605 MS4A1P11836 297 aa5.22□□□□□ -1.57
RNF38-201ENST00000259605 AMOTL1Q8IY63 956 aa5.22□□□□□ -1.57
RNF38-201ENST00000259605 L1TD1Q5T7N2 865 aaKnown RBP5.22□□□□□ -1.57
RNF38-201ENST00000259605 DDRGK1Q96HY6 314 aa5.22□□□□□ -1.57
RNF38-201ENST00000259605 ADRA2BP18089 450 aa5.22□□□□□ -1.57
RNF38-201ENST00000259605 FAM69CQ0P6D2 419 aa5.22□□□□□ -1.57
RNF38-201ENST00000259605 DNAJC5BQ9UF47 199 aa5.22□□□□□ -1.57
RNF38-201ENST00000259605 CECR2Q9BXF3 1484 aa5.22□□□□□ -1.57
RNF38-201ENST00000259605 TCEAL9Q9UHQ7 104 aa5.21□□□□□ -1.57
RNF38-201ENST00000259605 HSP90B1P14625 803 aaKnown RBP5.21□□□□□ -1.58
RNF38-201ENST00000259605 C16orf71Q8IYS4 520 aaPredicted RBP5.21□□□□□ -1.58
RNF38-201ENST00000259605 CALD1Q05682 793 aaKnown RBP5.21□□□□□ -1.58
RNF38-201ENST00000259605 RGL3Q3MIN7 710 aa5.21□□□□□ -1.58
RNF38-201ENST00000259605 GORABQ5T7V8 394 aa5.21□□□□□ -1.58
RNF38-201ENST00000259605 CCNB3Q8WWL7 1395 aa5.21□□□□□ -1.58
RNF38-201ENST00000259605 NACADO15069 1562 aa5.2□□□□□ -1.58
RNF38-201ENST00000259605 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.2□□□□□ -1.58
RNF38-201ENST00000259605 POGZQ7Z3K3 1410 aa5.2□□□□□ -1.58
RNF38-201ENST00000259605 KCNJ4P48050 445 aa5.2□□□□□ -1.58
RNF38-201ENST00000259605 RSPH4AQ5TD94 716 aa5.2□□□□□ -1.58
RNF38-201ENST00000259605 WWC1Q8IX03 1113 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms