RNA–Protein interactions for RNA: ENST00000254900.9

BRD8-202, Transcript of bromodomain containing 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRD8, Length 4,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD8-202ENST00000254900 TNIKQ9UKE5 1360 aa10.91□□□□□ -0.66
BRD8-202ENST00000254900 FAM9BQ8IZU0 186 aa10.9□□□□□ -0.66
BRD8-202ENST00000254900 BRPF3Q9ULD4 1205 aa10.89□□□□□ -0.67
BRD8-202ENST00000254900 L1TD1Q5T7N2 865 aaKnown RBP10.88□□□□□ -0.67
BRD8-202ENST00000254900 ZMYND15Q9H091 742 aa10.88□□□□□ -0.67
BRD8-202ENST00000254900 FAM43AQ8N2R8 423 aa10.88□□□□□ -0.67
BRD8-202ENST00000254900 EEA1Q15075 1411 aa10.87□□□□□ -0.67
BRD8-202ENST00000254900 A0A0U1RQG5 324 aaPredicted RBP10.87□□□□□ -0.67
BRD8-202ENST00000254900 NCLP19338 710 aaKnown RBP10.85□□□□□ -0.67
BRD8-202ENST00000254900 TNNT2P45379 298 aaPredicted RBP10.84□□□□□ -0.67
BRD8-202ENST00000254900 C11orf95C9JLR9 678 aaPredicted RBP10.84□□□□□ -0.67
BRD8-202ENST00000254900 MRS2Q9HD23 443 aa10.84□□□□□ -0.67
BRD8-202ENST00000254900 PLEKHG5O94827 1062 aa10.83□□□□□ -0.68
BRD8-202ENST00000254900 HIRIP3Q9BW71 556 aaPredicted RBP10.83□□□□□ -0.68
BRD8-202ENST00000254900 TCERG1O14776 1098 aaKnown RBP10.82□□□□□ -0.68
BRD8-202ENST00000254900 ARXQ96QS3 562 aa10.82□□□□□ -0.68
BRD8-202ENST00000254900 RRP9O43818 475 aaKnown RBP10.81□□□□□ -0.68
BRD8-202ENST00000254900 TRIM44Q96DX7 344 aaPredicted RBP10.81□□□□□ -0.68
BRD8-202ENST00000254900 ANP32BQ92688 251 aaKnown RBP10.81□□□□□ -0.68
BRD8-202ENST00000254900 TONSLQ96HA7 1378 aa10.8□□□□□ -0.68
BRD8-202ENST00000254900 CNGB1Q14028 1251 aaPredicted RBP10.8□□□□□ -0.68
BRD8-202ENST00000254900 DHX57Q6P158 1386 aaKnown RBP10.8□□□□□ -0.68
BRD8-202ENST00000254900 POLR3GLQ9BT43 218 aa10.78□□□□□ -0.68
BRD8-202ENST00000254900 RSF1Q96T23 1441 aaPredicted RBP10.78□□□□□ -0.68
BRD8-202ENST00000254900 CLIP1P30622 1438 aa10.77□□□□□ -0.69
BRD8-202ENST00000254900 FAM50AQ14320 339 aaKnown RBP10.77□□□□□ -0.69
BRD8-202ENST00000254900 GOLGA3Q08378 1498 aa10.76□□□□□ -0.69
BRD8-202ENST00000254900 FRAT1Q92837 279 aaPredicted RBP10.76□□□□□ -0.69
BRD8-202ENST00000254900 WASHC2AQ641Q2 1341 aa10.75□□□□□ -0.69
BRD8-202ENST00000254900 BECN1Q14457 450 aa10.75□□□□□ -0.69
BRD8-202ENST00000254900 ATP1B4Q9UN42 357 aaPredicted RBP10.74□□□□□ -0.69
BRD8-202ENST00000254900 NFKBIBQ15653 356 aa10.73□□□□□ -0.69
BRD8-202ENST00000254900 PDE4CQ08493 712 aa10.72□□□□□ -0.69
BRD8-202ENST00000254900 WASHC2CQ9Y4E1 1318 aa10.72□□□□□ -0.69
BRD8-202ENST00000254900 RB1CC1Q8TDY2 1594 aa10.72□□□□□ -0.69
BRD8-202ENST00000254900 PDE4AP27815 886 aa10.72□□□□□ -0.69
BRD8-202ENST00000254900 ARID4BQ4LE39 1312 aaPredicted RBP10.72□□□□□ -0.69
BRD8-202ENST00000254900 UPF2Q9HAU5 1272 aaKnown RBP10.7□□□□□ -0.7
BRD8-202ENST00000254900 PPP1R15AO75807 674 aaPredicted RBP10.69□□□□□ -0.7
BRD8-202ENST00000254900 MS4A1P11836 297 aa10.68□□□□□ -0.7
BRD8-202ENST00000254900 CDK11BP21127 795 aaKnown RBP10.68□□□□□ -0.7
BRD8-202ENST00000254900 GOLGA6L3A6NEY3 463 aa10.68□□□□□ -0.7
BRD8-202ENST00000254900 SIN3AQ96ST3 1273 aa10.67□□□□□ -0.7
BRD8-202ENST00000254900 ZBED9Q6R2W3 1325 aa10.66□□□□□ -0.7
BRD8-202ENST00000254900 VPS8Q8N3P4 1428 aa10.65□□□□□ -0.7
BRD8-202ENST00000254900 NUDCQ9Y266 331 aa10.65□□□□□ -0.7
BRD8-202ENST00000254900 TPM2P07951 284 aa10.64□□□□□ -0.71
BRD8-202ENST00000254900 EIF4G2P78344 907 aaKnown RBP eCLIP10.64□□□□□ -0.71
BRD8-202ENST00000254900 TMC1Q8TDI8 760 aa10.63□□□□□ -0.71
BRD8-202ENST00000254900 RBM10P98175 930 aaKnown RBP10.63□□□□□ -0.71
BRD8-202ENST00000254900 ZNF326Q5BKZ1 582 aaKnown RBP10.63□□□□□ -0.71
BRD8-202ENST00000254900 MAP7D2Q96T17 732 aa10.62□□□□□ -0.71
BRD8-202ENST00000254900 MYH16Q9H6N6 1097 aa10.61□□□□□ -0.71
BRD8-202ENST00000254900 ABCC9O60706 1549 aa10.6□□□□□ -0.71
BRD8-202ENST00000254900 MSNP26038 577 aaKnown RBP10.6□□□□□ -0.71
BRD8-202ENST00000254900 CCNB3Q8WWL7 1395 aa10.6□□□□□ -0.71
BRD8-202ENST00000254900 SLC4A3P48751 1232 aa10.6□□□□□ -0.71
BRD8-202ENST00000254900 CEP164Q9UPV0 1460 aa10.6□□□□□ -0.71
BRD8-202ENST00000254900 PDCL3Q9H2J4 239 aa10.58□□□□□ -0.72
BRD8-202ENST00000254900 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.58□□□□□ -0.72
BRD8-202ENST00000254900 CANXP27824 592 aaKnown RBP10.58□□□□□ -0.72
BRD8-202ENST00000254900 BACH2Q9BYV9 841 aa10.57□□□□□ -0.72
BRD8-202ENST00000254900 FRAT2O75474 233 aaPredicted RBP10.56□□□□□ -0.72
BRD8-202ENST00000254900 RAB3GAP2Q9H2M9 1393 aa10.56□□□□□ -0.72
BRD8-202ENST00000254900 SETD5Q9C0A6 1442 aa10.55□□□□□ -0.72
BRD8-202ENST00000254900 PDIA4P13667 645 aaKnown RBP10.55□□□□□ -0.72
BRD8-202ENST00000254900 SOGA1O94964 1423 aa10.54□□□□□ -0.72
BRD8-202ENST00000254900 MTERF4Q7Z6M4 381 aaKnown RBP10.54□□□□□ -0.72
BRD8-202ENST00000254900 GZF1Q9H116 711 aaPredicted RBP10.54□□□□□ -0.72
BRD8-202ENST00000254900 SLKQ9H2G2 1235 aaPredicted RBP10.52□□□□□ -0.72
BRD8-202ENST00000254900 CLCN1P35523 988 aa10.52□□□□□ -0.73
BRD8-202ENST00000254900 RGS3P49796 1198 aa10.52□□□□□ -0.73
BRD8-202ENST00000254900 CALD1Q05682 793 aaKnown RBP10.52□□□□□ -0.73
BRD8-202ENST00000254900 ARID3AQ99856 593 aa10.52□□□□□ -0.73
BRD8-202ENST00000254900 FAM13BQ9NYF5 915 aa10.52□□□□□ -0.73
BRD8-202ENST00000254900 RCAN3Q9UKA8 241 aa10.52□□□□□ -0.73
BRD8-202ENST00000254900 FGD1P98174 961 aa10.51□□□□□ -0.73
BRD8-202ENST00000254900 FAM161AQ3B820 660 aa10.51□□□□□ -0.73
BRD8-202ENST00000254900 GOLGA6L22H0YM25 854 aa10.51□□□□□ -0.73
BRD8-202ENST00000254900 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.51□□□□□ -0.73
BRD8-202ENST00000254900 BAZ1BQ9UIG0 1483 aaKnown RBP10.5□□□□□ -0.73
BRD8-202ENST00000254900 MRE11P49959 708 aa10.5□□□□□ -0.73
BRD8-202ENST00000254900 HSPA5P11021 654 aaKnown RBP10.5□□□□□ -0.73
BRD8-202ENST00000254900 EXOC6Q8TAG9 804 aa10.5□□□□□ -0.73
BRD8-202ENST00000254900 PRKRIP1Q9H875 184 aaPredicted RBP10.49□□□□□ -0.73
BRD8-202ENST00000254900 RRP1P56182 461 aaKnown RBP10.49□□□□□ -0.73
BRD8-202ENST00000254900 DNTTIP2Q5QJE6 756 aaKnown RBP10.49□□□□□ -0.73
BRD8-202ENST00000254900 AAMPQ13685 434 aa10.48□□□□□ -0.73
BRD8-202ENST00000254900 AMER1Q5JTC6 1135 aaPredicted RBP10.48□□□□□ -0.73
BRD8-202ENST00000254900 SENP3-EIF4A1A0A087X0R7 540 aa10.48□□□□□ -0.73
BRD8-202ENST00000254900 ESPNB1AK53 854 aa10.48□□□□□ -0.73
BRD8-202ENST00000254900 CCDC88BA6NC98 1476 aa10.47□□□□□ -0.73
BRD8-202ENST00000254900 BBXQ8WY36 941 aaPredicted RBP10.47□□□□□ -0.73
BRD8-202ENST00000254900 PTMSP20962 102 aa10.46□□□□□ -0.73
BRD8-202ENST00000254900 RRAGDQ9NQL2 400 aaPredicted RBP10.46□□□□□ -0.73
BRD8-202ENST00000254900 SMG6Q86US8 1419 aaKnown RBP10.46□□□□□ -0.74
BRD8-202ENST00000254900 KANK4Q5T7N3 995 aaPredicted RBP10.45□□□□□ -0.74
BRD8-202ENST00000254900 KIAA1211Q6ZU35 1233 aa10.44□□□□□ -0.74
BRD8-202ENST00000254900 PTMAP06454 111 aaKnown RBP10.44□□□□□ -0.74
BRD8-202ENST00000254900 AKNAQ7Z591 1439 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms