RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 PAXIP1Q6ZW49 1069 aaPredicted RBP10.79□□□□□ -0.68
USP29-201ENST00000254181 SLC4A1APQ9BWU0 796 aaKnown RBP10.79□□□□□ -0.68
USP29-201ENST00000254181 CNKSR2Q8WXI2 1034 aa10.78□□□□□ -0.68
USP29-201ENST00000254181 IGSF3O75054 1194 aa10.75□□□□□ -0.69
USP29-201ENST00000254181 PPP6R1Q9UPN7 881 aa10.75□□□□□ -0.69
USP29-201ENST00000254181 MSH5O43196 834 aa10.74□□□□□ -0.69
USP29-201ENST00000254181 PHF23Q9BUL5 403 aaPredicted RBP10.74□□□□□ -0.69
USP29-201ENST00000254181 HSP90B1P14625 803 aaKnown RBP10.67□□□□□ -0.7
USP29-201ENST00000254181 NAP1L5Q96NT1 182 aaPredicted RBP10.66□□□□□ -0.7
USP29-201ENST00000254181 FBLN2P98095 1184 aa10.65□□□□□ -0.7
USP29-201ENST00000254181 ZMYND15Q9H091 742 aa10.65□□□□□ -0.71
USP29-201ENST00000254181 KDM2AQ9Y2K7 1162 aa10.65□□□□□ -0.71
USP29-201ENST00000254181 NOP58Q9Y2X3 529 aaKnown RBP10.63□□□□□ -0.71
USP29-201ENST00000254181 FANCIQ9NVI1 1328 aa10.62□□□□□ -0.71
USP29-201ENST00000254181 AAMPQ13685 434 aa10.59□□□□□ -0.71
USP29-201ENST00000254181 ARID3AQ99856 593 aa10.58□□□□□ -0.72
USP29-201ENST00000254181 ANP32AP39687 249 aaKnown RBP10.58□□□□□ -0.72
USP29-201ENST00000254181 ZNF326Q5BKZ1 582 aaKnown RBP10.57□□□□□ -0.72
USP29-201ENST00000254181 NEFMP07197 916 aa10.57□□□□□ -0.72
USP29-201ENST00000254181 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
USP29-201ENST00000254181 ZBTB47Q9UFB7 747 aaPredicted RBP10.56□□□□□ -0.72
USP29-201ENST00000254181 CCDC9Q9Y3X0 531 aaKnown RBP10.56□□□□□ -0.72
USP29-201ENST00000254181 RSPH6AQ9H0K4 717 aa10.55□□□□□ -0.72
USP29-201ENST00000254181 RBM10P98175 930 aaKnown RBP10.53□□□□□ -0.72
USP29-201ENST00000254181 RSPH4AQ5TD94 716 aa10.5□□□□□ -0.73
USP29-201ENST00000254181 HMGB1P09429 215 aaKnown RBP10.49□□□□□ -0.73
USP29-201ENST00000254181 BCCIPQ9P287 314 aaKnown RBP eCLIP10.48□□□□□ -0.73
USP29-201ENST00000254181 HSP90AA2PQ14568 343 aaPredicted RBP10.48□□□□□ -0.73
USP29-201ENST00000254181 TRIM52Q96A61 297 aa10.47□□□□□ -0.73
USP29-201ENST00000254181 BRPF3Q9ULD4 1205 aa10.47□□□□□ -0.73
USP29-201ENST00000254181 LAS1LQ9Y4W2 734 aaKnown RBP10.46□□□□□ -0.73
USP29-201ENST00000254181 HNRNPUL2Q1KMD3 747 aaKnown RBP10.46□□□□□ -0.74
USP29-201ENST00000254181 PAK3O75914 559 aaPredicted RBP10.43□□□□□ -0.74
USP29-201ENST00000254181 HSP90AA1P07900 732 aaKnown RBP10.42□□□□□ -0.74
USP29-201ENST00000254181 PRDM10Q9NQV6 1147 aa10.42□□□□□ -0.74
USP29-201ENST00000254181 ZNF592Q92610 1267 aa10.4□□□□□ -0.74
USP29-201ENST00000254181 ARID4BQ4LE39 1312 aaPredicted RBP10.39□□□□□ -0.75
USP29-201ENST00000254181 ZNF526Q8TF50 670 aaPredicted RBP10.39□□□□□ -0.75
USP29-201ENST00000254181 ZFP91Q96JP5 570 aaPredicted RBP10.39□□□□□ -0.75
USP29-201ENST00000254181 ZBTB22O15209 634 aa10.38□□□□□ -0.75
USP29-201ENST00000254181 KCNH8Q96L42 1107 aa10.35□□□□□ -0.75
USP29-201ENST00000254181 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.35□□□□□ -0.75
USP29-201ENST00000254181 IPO9Q96P70 1041 aaKnown RBP10.33□□□□□ -0.76
USP29-201ENST00000254181 CNPY4Q8N129 248 aa10.32□□□□□ -0.76
USP29-201ENST00000254181 NCLP19338 710 aaKnown RBP10.31□□□□□ -0.76
USP29-201ENST00000254181 TMED8Q6PL24 325 aaPredicted RBP10.31□□□□□ -0.76
USP29-201ENST00000254181 ZNF428Q96B54 188 aa10.31□□□□□ -0.76
USP29-201ENST00000254181 PUS7Q96PZ0 661 aaKnown RBP10.31□□□□□ -0.76
USP29-201ENST00000254181 PPM1GO15355 546 aaPredicted RBP10.31□□□□□ -0.76
USP29-201ENST00000254181 B4GALNT3Q6L9W6 998 aa10.3□□□□□ -0.76
USP29-201ENST00000254181 NAP1L2Q9ULW6 460 aaPredicted RBP10.3□□□□□ -0.76
USP29-201ENST00000254181 GSE1Q14687 1217 aa10.28□□□□□ -0.76
USP29-201ENST00000254181 PNNQ9H307 717 aaKnown RBP10.28□□□□□ -0.76
USP29-201ENST00000254181 TICAM2Q86XR7 235 aa10.27□□□□□ -0.77
USP29-201ENST00000254181 PPP4R2Q9NY27 417 aa10.27□□□□□ -0.77
USP29-201ENST00000254181 RRP9O43818 475 aaKnown RBP10.27□□□□□ -0.77
USP29-201ENST00000254181 CWC22Q9HCG8 908 aaKnown RBP10.26□□□□□ -0.77
USP29-201ENST00000254181 USP35Q9P2H5 1018 aa10.26□□□□□ -0.77
USP29-201ENST00000254181 HNRNPUQ00839 825 aaKnown RBP eCLIP10.25□□□□□ -0.77
USP29-201ENST00000254181 ZBTB7CA1YPR0 619 aa10.25□□□□□ -0.77
USP29-201ENST00000254181 ANP32CO43423 234 aa10.25□□□□□ -0.77
USP29-201ENST00000254181 DDX10Q13206 875 aaKnown RBP10.25□□□□□ -0.77
USP29-201ENST00000254181 BBXQ8WY36 941 aaPredicted RBP10.25□□□□□ -0.77
USP29-201ENST00000254181 PSMD1Q99460 953 aa10.25□□□□□ -0.77
USP29-201ENST00000254181 FAM43AQ8N2R8 423 aa10.24□□□□□ -0.77
USP29-201ENST00000254181 NECTIN2Q92692 538 aa10.24□□□□□ -0.77
USP29-201ENST00000254181 TRHP20396 242 aaPredicted RBP10.24□□□□□ -0.77
USP29-201ENST00000254181 CHMP4BQ9H444 224 aaKnown RBP10.23□□□□□ -0.77
USP29-201ENST00000254181 C11orf95C9JLR9 678 aaPredicted RBP10.22□□□□□ -0.77
USP29-201ENST00000254181 CANXP27824 592 aaKnown RBP10.22□□□□□ -0.77
USP29-201ENST00000254181 CNGB1Q14028 1251 aaPredicted RBP10.22□□□□□ -0.77
USP29-201ENST00000254181 WWC1Q8IX03 1113 aa10.22□□□□□ -0.77
USP29-201ENST00000254181 CLSTN1O94985 981 aa10.2□□□□□ -0.78
USP29-201ENST00000254181 RGS3P49796 1198 aa10.2□□□□□ -0.78
USP29-201ENST00000254181 CERS3Q8IU89 383 aa10.19□□□□□ -0.78
USP29-201ENST00000254181 FRAT1Q92837 279 aaPredicted RBP10.18□□□□□ -0.78
USP29-201ENST00000254181 RBM25P49756 843 aaKnown RBP10.16□□□□□ -0.78
USP29-201ENST00000254181 SECISBP2LQ93073 1101 aaKnown RBP10.16□□□□□ -0.78
USP29-201ENST00000254181 TNNT2P45379 298 aaPredicted RBP10.15□□□□□ -0.78
USP29-201ENST00000254181 RAD21O60216 631 aa10.14□□□□□ -0.79
USP29-201ENST00000254181 PLCD4Q9BRC7 762 aa10.14□□□□□ -0.79
USP29-201ENST00000254181 WASHC2AQ641Q2 1341 aa10.13□□□□□ -0.79
USP29-201ENST00000254181 ZNF692Q9BU19 519 aaPredicted RBP10.12□□□□□ -0.79
USP29-201ENST00000254181 WASHC2CQ9Y4E1 1318 aa10.12□□□□□ -0.79
USP29-201ENST00000254181 FOXD4L5Q5VV16 416 aaPredicted RBP10.11□□□□□ -0.79
USP29-201ENST00000254181 FOXD4L4Q8WXT5 416 aaPredicted RBP10.11□□□□□ -0.79
USP29-201ENST00000254181 PTMSP20962 102 aa10.1□□□□□ -0.79
USP29-201ENST00000254181 PLCD3Q8N3E9 789 aa10.1□□□□□ -0.79
USP29-201ENST00000254181 PRDM16Q9HAZ2 1276 aa10.09□□□□□ -0.79
USP29-201ENST00000254181 TEX2Q8IWB9 1127 aa10.08□□□□□ -0.8
USP29-201ENST00000254181 KCTD17Q8N5Z5 321 aa10.08□□□□□ -0.8
USP29-201ENST00000254181 DDRGK1Q96HY6 314 aa10.08□□□□□ -0.8
USP29-201ENST00000254181 NFKBIBQ15653 356 aa10.07□□□□□ -0.8
USP29-201ENST00000254181 ARID3CA6NKF2 412 aa10.07□□□□□ -0.8
USP29-201ENST00000254181 IPO4Q8TEX9 1081 aaKnown RBP10.07□□□□□ -0.8
USP29-201ENST00000254181 ZHX1Q9UKY1 873 aaPredicted RBP10.07□□□□□ -0.8
USP29-201ENST00000254181 PATL2C9JE40 543 aaKnown RBP10.06□□□□□ -0.8
USP29-201ENST00000254181 ANP32BQ92688 251 aaKnown RBP10.06□□□□□ -0.8
USP29-201ENST00000254181 ADRA2BP18089 450 aa10.05□□□□□ -0.8
USP29-201ENST00000254181 L1TD1Q5T7N2 865 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms