RNA–Protein interactions for RNA: ENST00000250559.13

RAP1B-201, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 13,438 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-201ENST00000250559 MEX3CQ5U5Q3 659 aaKnown RBP6.51□□□□□ -1.37
RAP1B-201ENST00000250559 TONSLQ96HA7 1378 aa6.51□□□□□ -1.37
RAP1B-201ENST00000250559 KDM2AQ9Y2K7 1162 aa6.5□□□□□ -1.37
RAP1B-201ENST00000250559 CLIP1P30622 1438 aa6.5□□□□□ -1.37
RAP1B-201ENST00000250559 MSH5O43196 834 aa6.5□□□□□ -1.37
RAP1B-201ENST00000250559 BAZ1BQ9UIG0 1483 aaKnown RBP6.49□□□□□ -1.37
RAP1B-201ENST00000250559 IRX6P78412 446 aaPredicted RBP6.49□□□□□ -1.37
RAP1B-201ENST00000250559 PPP1R1BQ9UD71 204 aaPredicted RBP6.48□□□□□ -1.37
RAP1B-201ENST00000250559 CDK11AQ9UQ88 783 aaPredicted RBP6.48□□□□□ -1.37
RAP1B-201ENST00000250559 NPHP1O15259 732 aa6.48□□□□□ -1.37
RAP1B-201ENST00000250559 HNRNPUQ00839 825 aaKnown RBP eCLIP6.48□□□□□ -1.37
RAP1B-201ENST00000250559 NPM2Q86SE8 214 aaKnown RBP6.48□□□□□ -1.37
RAP1B-201ENST00000250559 RRP7BPQ9NSQ0 103 aa6.48□□□□□ -1.37
RAP1B-201ENST00000250559 TULP1O00294 542 aaPredicted RBP6.47□□□□□ -1.37
RAP1B-201ENST00000250559 ABCC8Q09428 1581 aa6.47□□□□□ -1.37
RAP1B-201ENST00000250559 MIER1Q8N108 512 aa6.47□□□□□ -1.37
RAP1B-201ENST00000250559 CANXP27824 592 aaKnown RBP6.47□□□□□ -1.37
RAP1B-201ENST00000250559 SOGA1O94964 1423 aa6.47□□□□□ -1.37
RAP1B-201ENST00000250559 MTUS2Q5JR59 1369 aa6.47□□□□□ -1.37
RAP1B-201ENST00000250559 GOLGA3Q08378 1498 aa6.46□□□□□ -1.37
RAP1B-201ENST00000250559 WRNQ14191 1432 aaPredicted RBP eCLIP6.46□□□□□ -1.38
RAP1B-201ENST00000250559 NACADO15069 1562 aa6.46□□□□□ -1.38
RAP1B-201ENST00000250559 MROH2BQ7Z745 1585 aa6.45□□□□□ -1.38
RAP1B-201ENST00000250559 NUTM2FA1L443 756 aa6.44□□□□□ -1.38
RAP1B-201ENST00000250559 NUTM2BA6NNL0 878 aaPredicted RBP6.44□□□□□ -1.38
RAP1B-201ENST00000250559 NUTM2EB1AL46 878 aaPredicted RBP6.44□□□□□ -1.38
RAP1B-201ENST00000250559 NUTM2AQ8IVF1 878 aaPredicted RBP6.44□□□□□ -1.38
RAP1B-201ENST00000250559 CFAP44Q96MT7 982 aa6.44□□□□□ -1.38
RAP1B-201ENST00000250559 DNAJC5BQ9UF47 199 aa6.43□□□□□ -1.38
RAP1B-201ENST00000250559 NCBP3Q53F19 620 aaKnown RBP6.43□□□□□ -1.38
RAP1B-201ENST00000250559 WIZO95785 1651 aa6.43□□□□□ -1.38
RAP1B-201ENST00000250559 RTL5Q5HYW3 569 aaPredicted RBP6.43□□□□□ -1.38
RAP1B-201ENST00000250559 CCDC88BA6NC98 1476 aa6.42□□□□□ -1.38
RAP1B-201ENST00000250559 DCAF8L1A6NGE4 600 aa6.42□□□□□ -1.38
RAP1B-201ENST00000250559 GGT6Q6P531 493 aa6.41□□□□□ -1.38
RAP1B-201ENST00000250559 SAFB2Q14151 953 aaKnown RBP eCLIP6.41□□□□□ -1.38
RAP1B-201ENST00000250559 AMER1Q5JTC6 1135 aaPredicted RBP6.41□□□□□ -1.38
RAP1B-201ENST00000250559 SIN3AQ96ST3 1273 aa6.41□□□□□ -1.38
RAP1B-201ENST00000250559 EIF4G1Q04637 1599 aaKnown RBP6.41□□□□□ -1.38
RAP1B-201ENST00000250559 BAZ1AQ9NRL2 1556 aaPredicted RBP6.4□□□□□ -1.38
RAP1B-201ENST00000250559 NUTM2DQ5VT03 806 aaPredicted RBP6.4□□□□□ -1.38
RAP1B-201ENST00000250559 RGL3Q3MIN7 710 aa6.4□□□□□ -1.38
RAP1B-201ENST00000250559 TMC1Q8TDI8 760 aa6.39□□□□□ -1.39
RAP1B-201ENST00000250559 ZBTB47Q9UFB7 747 aaPredicted RBP6.38□□□□□ -1.39
RAP1B-201ENST00000250559 CEP164Q9UPV0 1460 aa6.38□□□□□ -1.39
RAP1B-201ENST00000250559 ZNF330Q9Y3S2 320 aaPredicted RBP6.38□□□□□ -1.39
RAP1B-201ENST00000250559 TAOK2Q9UL54 1235 aa6.38□□□□□ -1.39
RAP1B-201ENST00000250559 PPM1GO15355 546 aaPredicted RBP6.37□□□□□ -1.39
RAP1B-201ENST00000250559 PAK3O75914 559 aaPredicted RBP6.37□□□□□ -1.39
RAP1B-201ENST00000250559 MRS2Q9HD23 443 aa6.36□□□□□ -1.39
RAP1B-201ENST00000250559 TNIKQ9UKE5 1360 aa6.36□□□□□ -1.39
RAP1B-201ENST00000250559 TSPY4P0CV99 314 aa6.35□□□□□ -1.39
RAP1B-201ENST00000250559 TSPY10P0CW01 314 aa6.35□□□□□ -1.39
RAP1B-201ENST00000250559 FAM69CQ0P6D2 419 aa6.35□□□□□ -1.39
RAP1B-201ENST00000250559 CUX2O14529 1486 aa6.35□□□□□ -1.39
RAP1B-201ENST00000250559 NEFMP07197 916 aa6.35□□□□□ -1.39
RAP1B-201ENST00000250559 KIF27Q86VH2 1401 aa6.35□□□□□ -1.39
RAP1B-201ENST00000250559 WWC3Q9ULE0 1092 aa6.35□□□□□ -1.39
RAP1B-201ENST00000250559 ANP32AP39687 249 aaKnown RBP6.35□□□□□ -1.39
RAP1B-201ENST00000250559 EIF4G2P78344 907 aaKnown RBP eCLIP6.34□□□□□ -1.39
RAP1B-201ENST00000250559 NBR1Q14596 966 aa6.34□□□□□ -1.39
RAP1B-201ENST00000250559 CFDP1Q9UEE9 299 aaPredicted RBP6.34□□□□□ -1.39
RAP1B-201ENST00000250559 OSCARQ8IYS5 282 aa6.34□□□□□ -1.4
RAP1B-201ENST00000250559 WDR43Q15061 677 aaKnown RBP eCLIP6.33□□□□□ -1.4
RAP1B-201ENST00000250559 KANK4Q5T7N3 995 aaPredicted RBP6.33□□□□□ -1.4
RAP1B-201ENST00000250559 STK26Q9P289 416 aa6.33□□□□□ -1.4
RAP1B-201ENST00000250559 CSB-PGBD3P0DP91 1061 aa6.33□□□□□ -1.4
RAP1B-201ENST00000250559 FOXD1Q16676 465 aa6.32□□□□□ -1.4
RAP1B-201ENST00000250559 EEA1Q15075 1411 aa6.32□□□□□ -1.4
RAP1B-201ENST00000250559 RUSC2Q8N2Y8 1516 aa6.31□□□□□ -1.4
RAP1B-201ENST00000250559 PLEKHD1A6NEE1 506 aa6.31□□□□□ -1.4
RAP1B-201ENST00000250559 CC2D1BQ5T0F9 858 aaKnown RBP6.31□□□□□ -1.4
RAP1B-201ENST00000250559 CARD11Q9BXL7 1154 aa6.31□□□□□ -1.4
RAP1B-201ENST00000250559 SUPT16HQ9Y5B9 1047 aaKnown RBP6.31□□□□□ -1.4
RAP1B-201ENST00000250559 CCDC136Q96JN2 1154 aa6.3□□□□□ -1.4
RAP1B-201ENST00000250559 NEUROD2Q15784 382 aa6.3□□□□□ -1.4
RAP1B-201ENST00000250559 TNNT2P45379 298 aaPredicted RBP6.29□□□□□ -1.4
RAP1B-201ENST00000250559 CARMIL1Q5VZK9 1371 aa6.29□□□□□ -1.4
RAP1B-201ENST00000250559 TOP2AP11388 1531 aaKnown RBP6.28□□□□□ -1.4
RAP1B-201ENST00000250559 TDRD9Q8NDG6 1382 aaKnown RBP6.28□□□□□ -1.4
RAP1B-201ENST00000250559 SF3B2Q13435 895 aaKnown RBP6.27□□□□□ -1.4
RAP1B-201ENST00000250559 CCNB3Q8WWL7 1395 aa6.27□□□□□ -1.41
RAP1B-201ENST00000250559 DCAF11Q8TEB1 546 aa6.26□□□□□ -1.41
RAP1B-201ENST00000250559 USP35Q9P2H5 1018 aa6.26□□□□□ -1.41
RAP1B-201ENST00000250559 GRM1Q13255 1194 aa6.26□□□□□ -1.41
RAP1B-201ENST00000250559 LAS1LQ9Y4W2 734 aaKnown RBP6.26□□□□□ -1.41
RAP1B-201ENST00000250559 RBM33Q96EV2 1170 aaKnown RBP6.26□□□□□ -1.41
RAP1B-201ENST00000250559 ARHGAP35Q9NRY4 1499 aa6.26□□□□□ -1.41
RAP1B-201ENST00000250559 SMARCA2P51531 1590 aa6.25□□□□□ -1.41
RAP1B-201ENST00000250559 ISY1Q9ULR0 285 aaKnown RBP6.24□□□□□ -1.41
RAP1B-201ENST00000250559 PAXIP1Q6ZW49 1069 aaPredicted RBP6.24□□□□□ -1.41
RAP1B-201ENST00000250559 POGKQ9P215 609 aa6.24□□□□□ -1.41
RAP1B-201ENST00000250559 LTV1Q96GA3 475 aaPredicted RBP6.24□□□□□ -1.41
RAP1B-201ENST00000250559 RAPGEF2Q9Y4G8 1499 aa6.24□□□□□ -1.41
RAP1B-201ENST00000250559 FHOD3Q2V2M9 1422 aa6.24□□□□□ -1.41
RAP1B-201ENST00000250559 SYTL4Q96C24 671 aaPredicted RBP6.24□□□□□ -1.41
RAP1B-201ENST00000250559 VPS8Q8N3P4 1428 aa6.24□□□□□ -1.41
RAP1B-201ENST00000250559 SMARCA4P51532 1647 aa6.24□□□□□ -1.41
RAP1B-201ENST00000250559 KNSTRNQ9Y448 316 aa6.23□□□□□ -1.41
RAP1B-201ENST00000250559 HSP90AA1P07900 732 aaKnown RBP6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms