RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 HAP1P54257 671 aaPredicted RBP13.57□□□□□ -0.24
VIL1-201ENST00000248444 RGL3Q3MIN7 710 aa13.57□□□□□ -0.24
VIL1-201ENST00000248444 EIF4G1Q04637 1599 aaKnown RBP13.56□□□□□ -0.24
VIL1-201ENST00000248444 WDR43Q15061 677 aaKnown RBP eCLIP13.54□□□□□ -0.24
VIL1-201ENST00000248444 EEA1Q15075 1411 aa13.53□□□□□ -0.24
VIL1-201ENST00000248444 TMC1Q8TDI8 760 aa13.53□□□□□ -0.24
VIL1-201ENST00000248444 GTF3C3Q9Y5Q9 886 aa13.52□□□□□ -0.24
VIL1-201ENST00000248444 CECR2Q9BXF3 1484 aa13.52□□□□□ -0.24
VIL1-201ENST00000248444 HNRNPUQ00839 825 aaKnown RBP eCLIP13.5□□□□□ -0.25
VIL1-201ENST00000248444 CEP162Q5TB80 1403 aa13.5□□□□□ -0.25
VIL1-201ENST00000248444 MLECQ14165 292 aa13.5□□□□□ -0.25
VIL1-201ENST00000248444 HIRIP3Q9BW71 556 aaPredicted RBP13.49□□□□□ -0.25
VIL1-201ENST00000248444 NPM2Q86SE8 214 aaKnown RBP13.49□□□□□ -0.25
VIL1-201ENST00000248444 CUX2O14529 1486 aa13.47□□□□□ -0.25
VIL1-201ENST00000248444 CEP164Q9UPV0 1460 aa13.45□□□□□ -0.26
VIL1-201ENST00000248444 LMOD2Q6P5Q4 547 aa13.45□□□□□ -0.26
VIL1-201ENST00000248444 PDS5BQ9NTI5 1447 aa13.43□□□□□ -0.26
VIL1-201ENST00000248444 EIF4G2P78344 907 aaKnown RBP eCLIP13.43□□□□□ -0.26
VIL1-201ENST00000248444 CARMIL1Q5VZK9 1371 aa13.43□□□□□ -0.26
VIL1-201ENST00000248444 MRS2Q9HD23 443 aa13.42□□□□□ -0.26
VIL1-201ENST00000248444 CCNB3Q8WWL7 1395 aa13.42□□□□□ -0.26
VIL1-201ENST00000248444 PPM1GO15355 546 aaPredicted RBP13.41□□□□□ -0.26
VIL1-201ENST00000248444 POGKQ9P215 609 aa13.41□□□□□ -0.26
VIL1-201ENST00000248444 ARXQ96QS3 562 aa13.39□□□□□ -0.27
VIL1-201ENST00000248444 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.38□□□□□ -0.27
VIL1-201ENST00000248444 SMARCA2P51531 1590 aa13.38□□□□□ -0.27
VIL1-201ENST00000248444 HSP90AA1P07900 732 aaKnown RBP13.37□□□□□ -0.27
VIL1-201ENST00000248444 TNIKQ9UKE5 1360 aa13.37□□□□□ -0.27
VIL1-201ENST00000248444 FKBP8Q14318 412 aa13.37□□□□□ -0.27
VIL1-201ENST00000248444 ANP32AP39687 249 aaKnown RBP13.36□□□□□ -0.27
VIL1-201ENST00000248444 CARD11Q9BXL7 1154 aa13.35□□□□□ -0.27
VIL1-201ENST00000248444 ACIN1Q9UKV3 1341 aaKnown RBP13.35□□□□□ -0.27
VIL1-201ENST00000248444 SOGA1O94964 1423 aa13.35□□□□□ -0.27
VIL1-201ENST00000248444 KANK1Q14678 1352 aa13.34□□□□□ -0.27
VIL1-201ENST00000248444 TDRD9Q8NDG6 1382 aaKnown RBP13.34□□□□□ -0.27
VIL1-201ENST00000248444 CDCA8Q53HL2 280 aa13.33□□□□□ -0.28
VIL1-201ENST00000248444 UPF2Q9HAU5 1272 aaKnown RBP13.33□□□□□ -0.28
VIL1-201ENST00000248444 CFAP53Q96M91 514 aa13.33□□□□□ -0.28
VIL1-201ENST00000248444 CARMIL2Q6F5E8 1435 aa13.33□□□□□ -0.28
VIL1-201ENST00000248444 CCDC88BA6NC98 1476 aa13.33□□□□□ -0.28
VIL1-201ENST00000248444 GGT6Q6P531 493 aa13.32□□□□□ -0.28
VIL1-201ENST00000248444 KNSTRNQ9Y448 316 aa13.32□□□□□ -0.28
VIL1-201ENST00000248444 MROH2BQ7Z745 1585 aa13.32□□□□□ -0.28
VIL1-201ENST00000248444 MYO15BQ96JP2 1530 aa13.32□□□□□ -0.28
VIL1-201ENST00000248444 MYH16Q9H6N6 1097 aa13.32□□□□□ -0.28
VIL1-201ENST00000248444 FHAD1B1AJZ9 1412 aa13.32□□□□□ -0.28
VIL1-201ENST00000248444 HDGFP51858 240 aaKnown RBP13.3□□□□□ -0.28
VIL1-201ENST00000248444 SENP3-EIF4A1A0A087X0R7 540 aa13.27□□□□□ -0.28
VIL1-201ENST00000248444 TNNT2P45379 298 aaPredicted RBP13.27□□□□□ -0.29
VIL1-201ENST00000248444 CCDC136Q96JN2 1154 aa13.26□□□□□ -0.29
VIL1-201ENST00000248444 ABCC8Q09428 1581 aa13.26□□□□□ -0.29
VIL1-201ENST00000248444 LAS1LQ9Y4W2 734 aaKnown RBP13.25□□□□□ -0.29
VIL1-201ENST00000248444 SAFB2Q14151 953 aaKnown RBP eCLIP13.24□□□□□ -0.29
VIL1-201ENST00000248444 NPHP1O15259 732 aa13.24□□□□□ -0.29
VIL1-201ENST00000248444 SIN3AQ96ST3 1273 aa13.24□□□□□ -0.29
VIL1-201ENST00000248444 SOX12O15370 315 aa13.24□□□□□ -0.29
VIL1-201ENST00000248444 DCAF11Q8TEB1 546 aa13.24□□□□□ -0.29
VIL1-201ENST00000248444 NEUROD2Q15784 382 aa13.23□□□□□ -0.29
VIL1-201ENST00000248444 MAPK8IP3Q9UPT6 1336 aa13.22□□□□□ -0.29
VIL1-201ENST00000248444 SRPK2P78362 688 aaKnown RBP13.21□□□□□ -0.29
VIL1-201ENST00000248444 IRX6P78412 446 aaPredicted RBP13.21□□□□□ -0.29
VIL1-201ENST00000248444 CADPSQ9ULU8 1353 aa13.21□□□□□ -0.29
VIL1-201ENST00000248444 STK26Q9P289 416 aa13.21□□□□□ -0.3
VIL1-201ENST00000248444 NUDCQ9Y266 331 aa13.2□□□□□ -0.3
VIL1-201ENST00000248444 CC2D1BQ5T0F9 858 aaKnown RBP13.2□□□□□ -0.3
VIL1-201ENST00000248444 EFCAB2Q5VUJ9 269 aa13.19□□□□□ -0.3
VIL1-201ENST00000248444 WIZO95785 1651 aa13.18□□□□□ -0.3
VIL1-201ENST00000248444 U2SURPO15042 1029 aaKnown RBP13.18□□□□□ -0.3
VIL1-201ENST00000248444 MIER1Q8N108 512 aa13.17□□□□□ -0.3
VIL1-201ENST00000248444 ARHGAP35Q9NRY4 1499 aa13.17□□□□□ -0.3
VIL1-201ENST00000248444 TMF1P82094 1093 aa13.15□□□□□ -0.3
VIL1-201ENST00000248444 TOP2AP11388 1531 aaKnown RBP13.15□□□□□ -0.3
VIL1-201ENST00000248444 ANP32BQ92688 251 aaKnown RBP13.14□□□□□ -0.31
VIL1-201ENST00000248444 CYB5RLQ6IPT4 315 aa13.14□□□□□ -0.31
VIL1-201ENST00000248444 PAK3O75914 559 aaPredicted RBP13.14□□□□□ -0.31
VIL1-201ENST00000248444 PKD2Q13563 968 aa13.13□□□□□ -0.31
VIL1-201ENST00000248444 FTSJ3Q8IY81 847 aaKnown RBP13.13□□□□□ -0.31
VIL1-201ENST00000248444 FOXD1Q16676 465 aa13.12□□□□□ -0.31
VIL1-201ENST00000248444 HNRNPMP52272 730 aaKnown RBP eCLIP13.12□□□□□ -0.31
VIL1-201ENST00000248444 JPH4Q96JJ6 628 aa13.12□□□□□ -0.31
VIL1-201ENST00000248444 KIF3BO15066 747 aa13.12□□□□□ -0.31
VIL1-201ENST00000248444 FMN1Q68DA7 1419 aa13.11□□□□□ -0.31
VIL1-201ENST00000248444 ATAD2BQ9ULI0 1458 aa13.11□□□□□ -0.31
VIL1-201ENST00000248444 KANK4Q5T7N3 995 aaPredicted RBP13.09□□□□□ -0.31
VIL1-201ENST00000248444 OSCARQ8IYS5 282 aa13.09□□□□□ -0.31
VIL1-201ENST00000248444 FANCD2Q9BXW9 1451 aa13.08□□□□□ -0.31
VIL1-201ENST00000248444 NUTM2DQ5VT03 806 aaPredicted RBP13.08□□□□□ -0.32
VIL1-201ENST00000248444 PNNQ9H307 717 aaKnown RBP13.07□□□□□ -0.32
VIL1-201ENST00000248444 MORC1Q86VD1 984 aa13.07□□□□□ -0.32
VIL1-201ENST00000248444 EID1Q9Y6B2 187 aa13.07□□□□□ -0.32
VIL1-201ENST00000248444 CSB-PGBD3P0DP91 1061 aa13.07□□□□□ -0.32
VIL1-201ENST00000248444 NUP155O75694 1391 aa13.07□□□□□ -0.32
VIL1-201ENST00000248444 HDGFL2Q7Z4V5 671 aaPredicted RBP13.07□□□□□ -0.32
VIL1-201ENST00000248444 SPAG9O60271 1321 aaKnown RBP13.07□□□□□ -0.32
VIL1-201ENST00000248444 WASHC2CQ9Y4E1 1318 aa13.07□□□□□ -0.32
VIL1-201ENST00000248444 RAPGEF2Q9Y4G8 1499 aa13.06□□□□□ -0.32
VIL1-201ENST00000248444 ANKRD30AQ9BXX3 1397 aa13.06□□□□□ -0.32
VIL1-201ENST00000248444 FHOD3Q2V2M9 1422 aa13.06□□□□□ -0.32
VIL1-201ENST00000248444 CCDC9Q9Y3X0 531 aaKnown RBP13.06□□□□□ -0.32
VIL1-201ENST00000248444 FRAT1Q92837 279 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms