RNA–Protein interactions for RNA: ENST00000241312.8

CSMD2-201, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best)

Gene CSMD2, Length 13,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-201ENST00000241312 ZRSR1Q15695 479 aaKnown RBP8.87□□□□□ -0.99
CSMD2-201ENST00000241312 RTN4Q9NQC3 1192 aaKnown RBP8.86□□□□□ -0.99
CSMD2-201ENST00000241312 CASC1Q6TDU7 716 aa8.86□□□□□ -0.99
CSMD2-201ENST00000241312 CHGAP10645 457 aaKnown RBP8.84□□□□□ -0.99
CSMD2-201ENST00000241312 CLIP1P30622 1438 aa8.84□□□□□ -0.99
CSMD2-201ENST00000241312 PLPPR3Q6T4P5 718 aa8.84□□□□□ -0.99
CSMD2-201ENST00000241312 MTUS2Q5JR59 1369 aa8.83□□□□□ -1
CSMD2-201ENST00000241312 SENP3Q9H4L4 574 aaPredicted RBP8.82□□□□□ -1
CSMD2-201ENST00000241312 GOLGA6L6A8MZA4 724 aa8.82□□□□□ -1
CSMD2-201ENST00000241312 PPM1GO15355 546 aaPredicted RBP8.82□□□□□ -1
CSMD2-201ENST00000241312 TPRNQ4KMQ1 711 aa8.81□□□□□ -1
CSMD2-201ENST00000241312 DNTTIP2Q5QJE6 756 aaKnown RBP8.8□□□□□ -1
CSMD2-201ENST00000241312 CHIC2Q9UKJ5 165 aa8.8□□□□□ -1
CSMD2-201ENST00000241312 NRDCO43847 1150 aa8.8□□□□□ -1
CSMD2-201ENST00000241312 NAP1L5Q96NT1 182 aaPredicted RBP8.8□□□□□ -1
CSMD2-201ENST00000241312 EIF4G2P78344 907 aaKnown RBP eCLIP8.8□□□□□ -1
CSMD2-201ENST00000241312 FTSJ3Q8IY81 847 aaKnown RBP8.79□□□□□ -1
CSMD2-201ENST00000241312 LAS1LQ9Y4W2 734 aaKnown RBP8.78□□□□□ -1
CSMD2-201ENST00000241312 KDM2AQ9Y2K7 1162 aa8.78□□□□□ -1
CSMD2-201ENST00000241312 CHAF1AQ13111 956 aaPredicted RBP8.78□□□□□ -1
CSMD2-201ENST00000241312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.78□□□□□ -1
CSMD2-201ENST00000241312 RSF1Q96T23 1441 aaPredicted RBP8.77□□□□□ -1.01
CSMD2-201ENST00000241312 CFAP53Q96M91 514 aa8.77□□□□□ -1.01
CSMD2-201ENST00000241312 CDCA8Q53HL2 280 aa8.77□□□□□ -1.01
CSMD2-201ENST00000241312 TSPY4P0CV99 314 aa8.77□□□□□ -1.01
CSMD2-201ENST00000241312 TSPY10P0CW01 314 aa8.77□□□□□ -1.01
CSMD2-201ENST00000241312 EEA1Q15075 1411 aa8.76□□□□□ -1.01
CSMD2-201ENST00000241312 CHMP4BQ9H444 224 aaKnown RBP8.76□□□□□ -1.01
CSMD2-201ENST00000241312 NOP58Q9Y2X3 529 aaKnown RBP8.75□□□□□ -1.01
CSMD2-201ENST00000241312 NPM1P06748 294 aaKnown RBP eCLIP8.75□□□□□ -1.01
CSMD2-201ENST00000241312 ZCCHC6Q5VYS8 1495 aaKnown RBP8.75□□□□□ -1.01
CSMD2-201ENST00000241312 GOLGA3Q08378 1498 aa8.75□□□□□ -1.01
CSMD2-201ENST00000241312 KNSTRNQ9Y448 316 aa8.74□□□□□ -1.01
CSMD2-201ENST00000241312 PLEKHG5O94827 1062 aa8.74□□□□□ -1.01
CSMD2-201ENST00000241312 MYO15BQ96JP2 1530 aa8.73□□□□□ -1.01
CSMD2-201ENST00000241312 SUPT16HQ9Y5B9 1047 aaKnown RBP8.72□□□□□ -1.01
CSMD2-201ENST00000241312 PPP1R15AO75807 674 aaPredicted RBP8.71□□□□□ -1.01
CSMD2-201ENST00000241312 CEP162Q5TB80 1403 aa8.71□□□□□ -1.01
CSMD2-201ENST00000241312 PPP4R2Q9NY27 417 aa8.71□□□□□ -1.02
CSMD2-201ENST00000241312 L1TD1Q5T7N2 865 aaKnown RBP8.71□□□□□ -1.02
CSMD2-201ENST00000241312 MS4A1P11836 297 aa8.7□□□□□ -1.02
CSMD2-201ENST00000241312 A0A0G2JS52 829 aa8.7□□□□□ -1.02
CSMD2-201ENST00000241312 HSCBQ8IWL3 235 aa8.69□□□□□ -1.02
CSMD2-201ENST00000241312 MAPK8IP3Q9UPT6 1336 aa8.68□□□□□ -1.02
CSMD2-201ENST00000241312 HSP90AB1P08238 724 aaKnown RBP8.68□□□□□ -1.02
CSMD2-201ENST00000241312 MSNP26038 577 aaKnown RBP8.68□□□□□ -1.02
CSMD2-201ENST00000241312 RGS3P49796 1198 aa8.67□□□□□ -1.02
CSMD2-201ENST00000241312 FGD1P98174 961 aa8.67□□□□□ -1.02
CSMD2-201ENST00000241312 C14orf37Q86TY3 774 aa8.67□□□□□ -1.02
CSMD2-201ENST00000241312 ARID4BQ4LE39 1312 aaPredicted RBP8.67□□□□□ -1.02
CSMD2-201ENST00000241312 RRP7BPQ9NSQ0 103 aa8.67□□□□□ -1.02
CSMD2-201ENST00000241312 AMER1Q5JTC6 1135 aaPredicted RBP8.66□□□□□ -1.02
CSMD2-201ENST00000241312 GOLGA6L4A6NEF3 574 aa8.66□□□□□ -1.02
CSMD2-201ENST00000241312 ZBTB7CA1YPR0 619 aa8.66□□□□□ -1.02
CSMD2-201ENST00000241312 TAOK2Q9UL54 1235 aa8.65□□□□□ -1.02
CSMD2-201ENST00000241312 NUDCQ9Y266 331 aa8.65□□□□□ -1.03
CSMD2-201ENST00000241312 CEP164Q9UPV0 1460 aa8.65□□□□□ -1.03
CSMD2-201ENST00000241312 KCNJ4P48050 445 aa8.64□□□□□ -1.03
CSMD2-201ENST00000241312 PLCB2Q00722 1185 aa8.64□□□□□ -1.03
CSMD2-201ENST00000241312 PTMSP20962 102 aa8.64□□□□□ -1.03
CSMD2-201ENST00000241312 B4GALNT3Q6L9W6 998 aa8.64□□□□□ -1.03
CSMD2-201ENST00000241312 CFAP44Q96MT7 982 aa8.64□□□□□ -1.03
CSMD2-201ENST00000241312 MCCP23508 829 aa8.63□□□□□ -1.03
CSMD2-201ENST00000241312 OS9Q13438 667 aaPredicted RBP8.63□□□□□ -1.03
CSMD2-201ENST00000241312 TULP1O00294 542 aaPredicted RBP8.63□□□□□ -1.03
CSMD2-201ENST00000241312 DEKP35659 375 aaKnown RBP8.63□□□□□ -1.03
CSMD2-201ENST00000241312 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.63□□□□□ -1.03
CSMD2-201ENST00000241312 CARD11Q9BXL7 1154 aa8.62□□□□□ -1.03
CSMD2-201ENST00000241312 SPRYD3Q8NCJ5 442 aa8.61□□□□□ -1.03
CSMD2-201ENST00000241312 ARID3AQ99856 593 aa8.61□□□□□ -1.03
CSMD2-201ENST00000241312 CHMP7Q8WUX9 453 aaPredicted RBP8.61□□□□□ -1.03
CSMD2-201ENST00000241312 PNNQ9H307 717 aaKnown RBP8.61□□□□□ -1.03
CSMD2-201ENST00000241312 KIF27Q86VH2 1401 aa8.6□□□□□ -1.03
CSMD2-201ENST00000241312 FRAT1Q92837 279 aaPredicted RBP8.6□□□□□ -1.03
CSMD2-201ENST00000241312 RB1CC1Q8TDY2 1594 aa8.6□□□□□ -1.03
CSMD2-201ENST00000241312 KIAA2012Q0VF49 1180 aa8.6□□□□□ -1.03
CSMD2-201ENST00000241312 DRC7Q8IY82 874 aa8.6□□□□□ -1.03
CSMD2-201ENST00000241312 GBP4Q96PP9 640 aa8.6□□□□□ -1.03
CSMD2-201ENST00000241312 NEUROD2Q15784 382 aa8.59□□□□□ -1.03
CSMD2-201ENST00000241312 RGL3Q3MIN7 710 aa8.59□□□□□ -1.03
CSMD2-201ENST00000241312 FHAD1B1AJZ9 1412 aa8.59□□□□□ -1.04
CSMD2-201ENST00000241312 HAP1P54257 671 aaPredicted RBP8.58□□□□□ -1.04
CSMD2-201ENST00000241312 PLEKHD1A6NEE1 506 aa8.58□□□□□ -1.04
CSMD2-201ENST00000241312 GOLGA2Q08379 1002 aa8.58□□□□□ -1.04
CSMD2-201ENST00000241312 SYAP1Q96A49 352 aaPredicted RBP8.58□□□□□ -1.04
CSMD2-201ENST00000241312 CFDP1Q9UEE9 299 aaPredicted RBP8.57□□□□□ -1.04
CSMD2-201ENST00000241312 NAP1L2Q9ULW6 460 aaPredicted RBP8.57□□□□□ -1.04
CSMD2-201ENST00000241312 TNIKQ9UKE5 1360 aa8.57□□□□□ -1.04
CSMD2-201ENST00000241312 WRNQ14191 1432 aaPredicted RBP eCLIP8.57□□□□□ -1.04
CSMD2-201ENST00000241312 NPHP1O15259 732 aa8.57□□□□□ -1.04
CSMD2-201ENST00000241312 GNL2Q13823 731 aaKnown RBP8.56□□□□□ -1.04
CSMD2-201ENST00000241312 KANK1Q14678 1352 aa8.55□□□□□ -1.04
CSMD2-201ENST00000241312 NOC3LQ8WTT2 800 aaKnown RBP8.55□□□□□ -1.04
CSMD2-201ENST00000241312 BAZ1BQ9UIG0 1483 aaKnown RBP8.55□□□□□ -1.04
CSMD2-201ENST00000241312 KIAA1211Q6ZU35 1233 aa8.55□□□□□ -1.04
CSMD2-201ENST00000241312 POGKQ9P215 609 aa8.55□□□□□ -1.04
CSMD2-201ENST00000241312 KTN1Q86UP2 1357 aaKnown RBP8.55□□□□□ -1.04
CSMD2-201ENST00000241312 HTATSF1O43719 755 aaKnown RBP8.55□□□□□ -1.04
CSMD2-201ENST00000241312 CCNB3Q8WWL7 1395 aa8.54□□□□□ -1.04
CSMD2-201ENST00000241312 CLSTN1O94985 981 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms