RNA–Protein interactions for RNA: ENST00000236698.9

STAG1-201, Transcript of stromal antigen 1, humanhuman

TSL 1 (best) BASIC

Gene STAG1, Length 5,951 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1-201ENST00000236698 PAXIP1Q6ZW49 1069 aaPredicted RBP9.61□□□□□ -0.87
STAG1-201ENST00000236698 PPM1GO15355 546 aaPredicted RBP9.58□□□□□ -0.88
STAG1-201ENST00000236698 PSMD1Q99460 953 aa9.57□□□□□ -0.88
STAG1-201ENST00000236698 BAZ1AQ9NRL2 1556 aaPredicted RBP9.56□□□□□ -0.88
STAG1-201ENST00000236698 ANP32EQ9BTT0 268 aa9.56□□□□□ -0.88
STAG1-201ENST00000236698 IRX6P78412 446 aaPredicted RBP9.55□□□□□ -0.88
STAG1-201ENST00000236698 FBLN2P98095 1184 aa9.54□□□□□ -0.88
STAG1-201ENST00000236698 NCLP19338 710 aaKnown RBP9.53□□□□□ -0.88
STAG1-201ENST00000236698 CNKSR2Q8WXI2 1034 aa9.52□□□□□ -0.89
STAG1-201ENST00000236698 BCCIPQ9P287 314 aaKnown RBP eCLIP9.51□□□□□ -0.89
STAG1-201ENST00000236698 ANO8Q9HCE9 1232 aaPredicted RBP9.51□□□□□ -0.89
STAG1-201ENST00000236698 RBM25P49756 843 aaKnown RBP9.49□□□□□ -0.89
STAG1-201ENST00000236698 SAMD1Q6SPF0 538 aaPredicted RBP9.49□□□□□ -0.89
STAG1-201ENST00000236698 RAD21O60216 631 aa9.46□□□□□ -0.89
STAG1-201ENST00000236698 PABPN1Q86U42 306 aaKnown RBP eCLIP9.46□□□□□ -0.89
STAG1-201ENST00000236698 FGD1P98174 961 aa9.44□□□□□ -0.9
STAG1-201ENST00000236698 CLSTN1O94985 981 aa9.43□□□□□ -0.9
STAG1-201ENST00000236698 DEKP35659 375 aaKnown RBP9.43□□□□□ -0.9
STAG1-201ENST00000236698 AEBP1Q8IUX7 1158 aa9.43□□□□□ -0.9
STAG1-201ENST00000236698 ZNF592Q92610 1267 aa9.42□□□□□ -0.9
STAG1-201ENST00000236698 KDM2AQ9Y2K7 1162 aa9.41□□□□□ -0.9
STAG1-201ENST00000236698 NEFMP07197 916 aa9.4□□□□□ -0.9
STAG1-201ENST00000236698 KCTD17Q8N5Z5 321 aa9.39□□□□□ -0.91
STAG1-201ENST00000236698 PLCD4Q9BRC7 762 aa9.38□□□□□ -0.91
STAG1-201ENST00000236698 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.38□□□□□ -0.91
STAG1-201ENST00000236698 ANP32BQ92688 251 aaKnown RBP9.38□□□□□ -0.91
STAG1-201ENST00000236698 IGSF3O75054 1194 aa9.37□□□□□ -0.91
STAG1-201ENST00000236698 ACIN1Q9UKV3 1341 aaKnown RBP9.36□□□□□ -0.91
STAG1-201ENST00000236698 ERICH6BQ5W0A0 696 aa9.35□□□□□ -0.91
STAG1-201ENST00000236698 PATL2C9JE40 543 aaKnown RBP9.35□□□□□ -0.91
STAG1-201ENST00000236698 TNIKQ9UKE5 1360 aa9.35□□□□□ -0.91
STAG1-201ENST00000236698 PTMAP06454 111 aaKnown RBP9.34□□□□□ -0.91
STAG1-201ENST00000236698 ZBTB47Q9UFB7 747 aaPredicted RBP9.34□□□□□ -0.91
STAG1-201ENST00000236698 WRNQ14191 1432 aaPredicted RBP eCLIP9.34□□□□□ -0.91
STAG1-201ENST00000236698 CECR2Q9BXF3 1484 aa9.32□□□□□ -0.92
STAG1-201ENST00000236698 LAS1LQ9Y4W2 734 aaKnown RBP9.32□□□□□ -0.92
STAG1-201ENST00000236698 GOLGA3Q08378 1498 aa9.32□□□□□ -0.92
STAG1-201ENST00000236698 BAZ1BQ9UIG0 1483 aaKnown RBP9.32□□□□□ -0.92
STAG1-201ENST00000236698 SCAF1Q9H7N4 1312 aaKnown RBP9.32□□□□□ -0.92
STAG1-201ENST00000236698 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
STAG1-201ENST00000236698 SMARCA2P51531 1590 aa9.3□□□□□ -0.92
STAG1-201ENST00000236698 CNGB1Q14028 1251 aaPredicted RBP9.3□□□□□ -0.92
STAG1-201ENST00000236698 CEP164Q9UPV0 1460 aa9.3□□□□□ -0.92
STAG1-201ENST00000236698 PRDM10Q9NQV6 1147 aa9.3□□□□□ -0.92
STAG1-201ENST00000236698 ATP1B4Q9UN42 357 aaPredicted RBP9.3□□□□□ -0.92
STAG1-201ENST00000236698 OS9Q13438 667 aaPredicted RBP9.3□□□□□ -0.92
STAG1-201ENST00000236698 ADRA2BP18089 450 aa9.29□□□□□ -0.92
STAG1-201ENST00000236698 MROH2BQ7Z745 1585 aa9.29□□□□□ -0.92
STAG1-201ENST00000236698 TICAM2Q86XR7 235 aa9.28□□□□□ -0.92
STAG1-201ENST00000236698 CWC22Q9HCG8 908 aaKnown RBP9.28□□□□□ -0.92
STAG1-201ENST00000236698 WWC1Q8IX03 1113 aa9.27□□□□□ -0.92
STAG1-201ENST00000236698 TNNT2P45379 298 aaPredicted RBP9.27□□□□□ -0.93
STAG1-201ENST00000236698 APPP05067 770 aa9.27□□□□□ -0.93
STAG1-201ENST00000236698 PUS7Q96PZ0 661 aaKnown RBP9.27□□□□□ -0.93
STAG1-201ENST00000236698 TOP2AP11388 1531 aaKnown RBP9.26□□□□□ -0.93
STAG1-201ENST00000236698 RBM10P98175 930 aaKnown RBP9.26□□□□□ -0.93
STAG1-201ENST00000236698 CLIP1P30622 1438 aa9.25□□□□□ -0.93
STAG1-201ENST00000236698 HNRNPUL2Q1KMD3 747 aaKnown RBP9.25□□□□□ -0.93
STAG1-201ENST00000236698 KIF27Q86VH2 1401 aa9.25□□□□□ -0.93
STAG1-201ENST00000236698 TSHZ2Q9NRE2 1034 aa9.25□□□□□ -0.93
STAG1-201ENST00000236698 RSPH6AQ9H0K4 717 aa9.25□□□□□ -0.93
STAG1-201ENST00000236698 ZFP91Q96JP5 570 aaPredicted RBP9.23□□□□□ -0.93
STAG1-201ENST00000236698 CEP162Q5TB80 1403 aa9.22□□□□□ -0.93
STAG1-201ENST00000236698 TMCO4Q5TGY1 634 aa9.21□□□□□ -0.93
STAG1-201ENST00000236698 FOXD4L5Q5VV16 416 aaPredicted RBP9.21□□□□□ -0.93
STAG1-201ENST00000236698 FOXD4L4Q8WXT5 416 aaPredicted RBP9.21□□□□□ -0.93
STAG1-201ENST00000236698 ARID3CA6NKF2 412 aa9.21□□□□□ -0.94
STAG1-201ENST00000236698 DIEXFQ68CQ4 756 aaKnown RBP9.21□□□□□ -0.94
STAG1-201ENST00000236698 PPARGC1BQ86YN6 1023 aaKnown RBP9.21□□□□□ -0.94
STAG1-201ENST00000236698 SPRYD3Q8NCJ5 442 aa9.21□□□□□ -0.94
STAG1-201ENST00000236698 PPP1R1BQ9UD71 204 aaPredicted RBP9.2□□□□□ -0.94
STAG1-201ENST00000236698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.19□□□□□ -0.94
STAG1-201ENST00000236698 CANXP27824 592 aaKnown RBP9.19□□□□□ -0.94
STAG1-201ENST00000236698 CNPY4Q8N129 248 aa9.18□□□□□ -0.94
STAG1-201ENST00000236698 CCDC88BA6NC98 1476 aa9.18□□□□□ -0.94
STAG1-201ENST00000236698 APBB1O00213 710 aa9.18□□□□□ -0.94
STAG1-201ENST00000236698 TRIM44Q96DX7 344 aaPredicted RBP9.18□□□□□ -0.94
STAG1-201ENST00000236698 ZBTB22O15209 634 aa9.18□□□□□ -0.94
STAG1-201ENST00000236698 E9PSI1 815 aa9.18□□□□□ -0.94
STAG1-201ENST00000236698 NAP1L2Q9ULW6 460 aaPredicted RBP9.17□□□□□ -0.94
STAG1-201ENST00000236698 AAMPQ13685 434 aa9.16□□□□□ -0.94
STAG1-201ENST00000236698 BRPF3Q9ULD4 1205 aa9.16□□□□□ -0.94
STAG1-201ENST00000236698 FAM9BQ8IZU0 186 aa9.16□□□□□ -0.94
STAG1-201ENST00000236698 SMARCA4P51532 1647 aa9.15□□□□□ -0.94
STAG1-201ENST00000236698 SALL2Q9Y467 1007 aaPredicted RBP9.15□□□□□ -0.94
STAG1-201ENST00000236698 GPATCH11Q8N954 259 aa9.14□□□□□ -0.95
STAG1-201ENST00000236698 ATAD2BQ9ULI0 1458 aa9.14□□□□□ -0.95
STAG1-201ENST00000236698 FAM50AQ14320 339 aaKnown RBP9.14□□□□□ -0.95
STAG1-201ENST00000236698 RSPH4AQ5TD94 716 aa9.14□□□□□ -0.95
STAG1-201ENST00000236698 NPM3O75607 178 aaKnown RBP9.14□□□□□ -0.95
STAG1-201ENST00000236698 FBXW7Q969H0 707 aa9.14□□□□□ -0.95
STAG1-201ENST00000236698 FHAD1B1AJZ9 1412 aa9.13□□□□□ -0.95
STAG1-201ENST00000236698 NOL8Q76FK4 1167 aaKnown RBP9.12□□□□□ -0.95
STAG1-201ENST00000236698 VPS8Q8N3P4 1428 aa9.11□□□□□ -0.95
STAG1-201ENST00000236698 ANAPC15P60006 121 aa9.11□□□□□ -0.95
STAG1-201ENST00000236698 CERS3Q8IU89 383 aa9.11□□□□□ -0.95
STAG1-201ENST00000236698 ZMYND15Q9H091 742 aa9.11□□□□□ -0.95
STAG1-201ENST00000236698 NPM1P06748 294 aaKnown RBP eCLIP9.1□□□□□ -0.95
STAG1-201ENST00000236698 ITGAEP38570 1179 aa9.1□□□□□ -0.95
STAG1-201ENST00000236698 SETQ01105 290 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms