RNA–Protein interactions for RNA: ENST00000232607.6

UMPS-201, Transcript of uridine monophosphate synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UMPS, Length 6,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UMPS-201ENST00000232607 MIER1Q8N108 512 aa16.54■□□□□ 0.24
UMPS-201ENST00000232607 ARID4BQ4LE39 1312 aaPredicted RBP16.53■□□□□ 0.24
UMPS-201ENST00000232607 UPF2Q9HAU5 1272 aaKnown RBP16.52■□□□□ 0.24
UMPS-201ENST00000232607 PPM1GO15355 546 aaPredicted RBP16.52■□□□□ 0.24
UMPS-201ENST00000232607 PPP1R15AO75807 674 aaPredicted RBP16.52■□□□□ 0.23
UMPS-201ENST00000232607 TPRNQ4KMQ1 711 aa16.51■□□□□ 0.23
UMPS-201ENST00000232607 ANP32BQ92688 251 aaKnown RBP16.46■□□□□ 0.23
UMPS-201ENST00000232607 MYO15BQ96JP2 1530 aa16.45■□□□□ 0.22
UMPS-201ENST00000232607 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.44■□□□□ 0.22
UMPS-201ENST00000232607 TAOK2Q9UL54 1235 aa16.43■□□□□ 0.22
UMPS-201ENST00000232607 TNNT2P45379 298 aaPredicted RBP16.43■□□□□ 0.22
UMPS-201ENST00000232607 ZCCHC6Q5VYS8 1495 aaKnown RBP16.42■□□□□ 0.22
UMPS-201ENST00000232607 HAP1P54257 671 aaPredicted RBP16.42■□□□□ 0.22
UMPS-201ENST00000232607 NEUROD2Q15784 382 aa16.42■□□□□ 0.22
UMPS-201ENST00000232607 CLIP1P30622 1438 aa16.42■□□□□ 0.22
UMPS-201ENST00000232607 LMOD2Q6P5Q4 547 aa16.41■□□□□ 0.22
UMPS-201ENST00000232607 LAS1LQ9Y4W2 734 aaKnown RBP16.41■□□□□ 0.22
UMPS-201ENST00000232607 TULP1O00294 542 aaPredicted RBP16.39■□□□□ 0.21
UMPS-201ENST00000232607 EIF4G2P78344 907 aaKnown RBP eCLIP16.37■□□□□ 0.21
UMPS-201ENST00000232607 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
UMPS-201ENST00000232607 PLEKHD1A6NEE1 506 aa16.35■□□□□ 0.21
UMPS-201ENST00000232607 MYH16Q9H6N6 1097 aa16.35■□□□□ 0.21
UMPS-201ENST00000232607 SOX12O15370 315 aa16.32■□□□□ 0.2
UMPS-201ENST00000232607 MLECQ14165 292 aa16.32■□□□□ 0.2
UMPS-201ENST00000232607 SIN3AQ96ST3 1273 aa16.32■□□□□ 0.2
UMPS-201ENST00000232607 CC2D1BQ5T0F9 858 aaKnown RBP16.3■□□□□ 0.2
UMPS-201ENST00000232607 CFDP1Q9UEE9 299 aaPredicted RBP16.29■□□□□ 0.2
UMPS-201ENST00000232607 CEP162Q5TB80 1403 aa16.27■□□□□ 0.2
UMPS-201ENST00000232607 CARD11Q9BXL7 1154 aa16.26■□□□□ 0.19
UMPS-201ENST00000232607 SUPT16HQ9Y5B9 1047 aaKnown RBP16.26■□□□□ 0.19
UMPS-201ENST00000232607 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
UMPS-201ENST00000232607 SAFB2Q14151 953 aaKnown RBP eCLIP16.25■□□□□ 0.19
UMPS-201ENST00000232607 ERCC6Q03468 1493 aa16.24■□□□□ 0.19
UMPS-201ENST00000232607 NCLP19338 710 aaKnown RBP16.23■□□□□ 0.19
UMPS-201ENST00000232607 KNSTRNQ9Y448 316 aa16.23■□□□□ 0.19
UMPS-201ENST00000232607 EIF4G1Q04637 1599 aaKnown RBP16.22■□□□□ 0.19
UMPS-201ENST00000232607 POGKQ9P215 609 aa16.21■□□□□ 0.19
UMPS-201ENST00000232607 FRAT1Q92837 279 aaPredicted RBP16.21■□□□□ 0.19
UMPS-201ENST00000232607 RB1CC1Q8TDY2 1594 aa16.21■□□□□ 0.18
UMPS-201ENST00000232607 GOLGA3Q08378 1498 aa16.2■□□□□ 0.18
UMPS-201ENST00000232607 FTSJ3Q8IY81 847 aaKnown RBP16.19■□□□□ 0.18
UMPS-201ENST00000232607 BAZ1BQ9UIG0 1483 aaKnown RBP16.19■□□□□ 0.18
UMPS-201ENST00000232607 U2SURPO15042 1029 aaKnown RBP16.18■□□□□ 0.18
UMPS-201ENST00000232607 NPHP1O15259 732 aa16.18■□□□□ 0.18
UMPS-201ENST00000232607 RSF1Q96T23 1441 aaPredicted RBP16.17■□□□□ 0.18
UMPS-201ENST00000232607 RGS3P49796 1198 aa16.16■□□□□ 0.18
UMPS-201ENST00000232607 CFAP53Q96M91 514 aa16.15■□□□□ 0.18
UMPS-201ENST00000232607 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
UMPS-201ENST00000232607 FOXD1Q16676 465 aa16.15■□□□□ 0.18
UMPS-201ENST00000232607 CCDC180Q9P1Z9 1646 aa16.13■□□□□ 0.17
UMPS-201ENST00000232607 STK26Q9P289 416 aa16.12■□□□□ 0.17
UMPS-201ENST00000232607 MAPK8IP3Q9UPT6 1336 aa16.11■□□□□ 0.17
UMPS-201ENST00000232607 DCAF11Q8TEB1 546 aa16.11■□□□□ 0.17
UMPS-201ENST00000232607 CDK11BP21127 795 aaKnown RBP16.1■□□□□ 0.17
UMPS-201ENST00000232607 NAP1L2Q9ULW6 460 aaPredicted RBP16.08■□□□□ 0.16
UMPS-201ENST00000232607 KIF27Q86VH2 1401 aa16.07■□□□□ 0.16
UMPS-201ENST00000232607 OS9Q13438 667 aaPredicted RBP16.06■□□□□ 0.16
UMPS-201ENST00000232607 SPRYD3Q8NCJ5 442 aa16.06■□□□□ 0.16
UMPS-201ENST00000232607 BECN1Q14457 450 aa16.05■□□□□ 0.16
UMPS-201ENST00000232607 B4GALNT3Q6L9W6 998 aa16.05■□□□□ 0.16
UMPS-201ENST00000232607 SRPK2P78362 688 aaKnown RBP16.05■□□□□ 0.16
UMPS-201ENST00000232607 GGT6Q6P531 493 aa16.05■□□□□ 0.16
UMPS-201ENST00000232607 RTN4Q9NQC3 1192 aaKnown RBP16.05■□□□□ 0.16
UMPS-201ENST00000232607 PLCB2Q00722 1185 aa16.03■□□□□ 0.16
UMPS-201ENST00000232607 APBB1O00213 710 aa16.01■□□□□ 0.15
UMPS-201ENST00000232607 NUTM2DQ5VT03 806 aaPredicted RBP16.01■□□□□ 0.15
UMPS-201ENST00000232607 AMER1Q5JTC6 1135 aaPredicted RBP16■□□□□ 0.15
UMPS-201ENST00000232607 TRIM44Q96DX7 344 aaPredicted RBP16■□□□□ 0.15
UMPS-201ENST00000232607 CDCA8Q53HL2 280 aa16■□□□□ 0.15
UMPS-201ENST00000232607 CCNB3Q8WWL7 1395 aa16■□□□□ 0.15
UMPS-201ENST00000232607 CASC1Q6TDU7 716 aa16■□□□□ 0.15
UMPS-201ENST00000232607 PAK3O75914 559 aaPredicted RBP15.99■□□□□ 0.15
UMPS-201ENST00000232607 DDRGK1Q96HY6 314 aa15.99■□□□□ 0.15
UMPS-201ENST00000232607 NUDCQ9Y266 331 aa15.99■□□□□ 0.15
UMPS-201ENST00000232607 PTMAP06454 111 aaKnown RBP15.99■□□□□ 0.15
UMPS-201ENST00000232607 SOGA1O94964 1423 aa15.97■□□□□ 0.15
UMPS-201ENST00000232607 ZNF330Q9Y3S2 320 aaPredicted RBP15.97■□□□□ 0.15
UMPS-201ENST00000232607 NCBP3Q53F19 620 aaKnown RBP15.97■□□□□ 0.15
UMPS-201ENST00000232607 CEP164Q9UPV0 1460 aa15.96■□□□□ 0.15
UMPS-201ENST00000232607 CECR2Q9BXF3 1484 aa15.95■□□□□ 0.14
UMPS-201ENST00000232607 ZRSR1Q15695 479 aaKnown RBP15.95■□□□□ 0.14
UMPS-201ENST00000232607 CUX2O14529 1486 aa15.95■□□□□ 0.14
UMPS-201ENST00000232607 ABCC8Q09428 1581 aa15.95■□□□□ 0.14
UMPS-201ENST00000232607 FGD1P98174 961 aa15.95■□□□□ 0.14
UMPS-201ENST00000232607 KCNJ4P48050 445 aa15.94■□□□□ 0.14
UMPS-201ENST00000232607 GOLGA6L22H0YM25 854 aa15.94■□□□□ 0.14
UMPS-201ENST00000232607 DNTTIP2Q5QJE6 756 aaKnown RBP15.94■□□□□ 0.14
UMPS-201ENST00000232607 GOLGA2Q08379 1002 aa15.93■□□□□ 0.14
UMPS-201ENST00000232607 HSP90AB1P08238 724 aaKnown RBP15.92■□□□□ 0.14
UMPS-201ENST00000232607 TMF1P82094 1093 aa15.92■□□□□ 0.14
UMPS-201ENST00000232607 TNIKQ9UKE5 1360 aa15.92■□□□□ 0.14
UMPS-201ENST00000232607 MORC1Q86VD1 984 aa15.91■□□□□ 0.14
UMPS-201ENST00000232607 ISY1Q9ULR0 285 aaKnown RBP15.91■□□□□ 0.14
UMPS-201ENST00000232607 KANK4Q5T7N3 995 aaPredicted RBP15.9■□□□□ 0.14
UMPS-201ENST00000232607 NUTM2FA1L443 756 aa15.9■□□□□ 0.14
UMPS-201ENST00000232607 CARMIL1Q5VZK9 1371 aa15.89■□□□□ 0.13
UMPS-201ENST00000232607 EEA1Q15075 1411 aa15.89■□□□□ 0.13
UMPS-201ENST00000232607 HSPA5P11021 654 aaKnown RBP15.88■□□□□ 0.13
UMPS-201ENST00000232607 PKD2Q13563 968 aa15.88■□□□□ 0.13
UMPS-201ENST00000232607 KANK1Q14678 1352 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms