RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 TULP1O00294 542 aaPredicted RBP13.99□□□□□ -0.17
TRPS1-201ENST00000220888 CFAP53Q96M91 514 aa13.97□□□□□ -0.17
TRPS1-201ENST00000220888 PPM1GO15355 546 aaPredicted RBP13.97□□□□□ -0.17
TRPS1-201ENST00000220888 DDX10Q13206 875 aaKnown RBP13.97□□□□□ -0.17
TRPS1-201ENST00000220888 CCDC136Q96JN2 1154 aa13.94□□□□□ -0.18
TRPS1-201ENST00000220888 MRS2Q9HD23 443 aa13.93□□□□□ -0.18
TRPS1-201ENST00000220888 POGKQ9P215 609 aa13.93□□□□□ -0.18
TRPS1-201ENST00000220888 RGL3Q3MIN7 710 aa13.93□□□□□ -0.18
TRPS1-201ENST00000220888 NCLP19338 710 aaKnown RBP13.91□□□□□ -0.18
TRPS1-201ENST00000220888 FKBP8Q14318 412 aa13.91□□□□□ -0.18
TRPS1-201ENST00000220888 CDCA8Q53HL2 280 aa13.91□□□□□ -0.18
TRPS1-201ENST00000220888 ZRSR1Q15695 479 aaKnown RBP13.9□□□□□ -0.18
TRPS1-201ENST00000220888 RRP7BPQ9NSQ0 103 aa13.9□□□□□ -0.18
TRPS1-201ENST00000220888 GOLGA2Q08379 1002 aa13.88□□□□□ -0.19
TRPS1-201ENST00000220888 HDGFP51858 240 aaKnown RBP13.87□□□□□ -0.19
TRPS1-201ENST00000220888 ERCC6Q03468 1493 aa13.87□□□□□ -0.19
TRPS1-201ENST00000220888 CFDP1Q9UEE9 299 aaPredicted RBP13.86□□□□□ -0.19
TRPS1-201ENST00000220888 MLECQ14165 292 aa13.85□□□□□ -0.19
TRPS1-201ENST00000220888 MAPK8IP3Q9UPT6 1336 aa13.85□□□□□ -0.19
TRPS1-201ENST00000220888 EIF4G2P78344 907 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■■■■■ 26.9
TRPS1-201ENST00000220888 KNSTRNQ9Y448 316 aa13.84□□□□□ -0.19
TRPS1-201ENST00000220888 RSF1Q96T23 1441 aaPredicted RBP13.84□□□□□ -0.19
TRPS1-201ENST00000220888 NUDCQ9Y266 331 aa13.84□□□□□ -0.19
TRPS1-201ENST00000220888 ACIN1Q9UKV3 1341 aaKnown RBP13.84□□□□□ -0.19
TRPS1-201ENST00000220888 CASC1Q6TDU7 716 aa13.84□□□□□ -0.19
TRPS1-201ENST00000220888 LAS1LQ9Y4W2 734 aaKnown RBP13.82□□□□□ -0.2
TRPS1-201ENST00000220888 EIF5BO60841 1220 aaKnown RBP13.82□□□□□ -0.2
TRPS1-201ENST00000220888 OS9Q13438 667 aaPredicted RBP13.8□□□□□ -0.2
TRPS1-201ENST00000220888 FTSJ3Q8IY81 847 aaKnown RBP13.78□□□□□ -0.2
TRPS1-201ENST00000220888 GOLGA6L22H0YM25 854 aa13.78□□□□□ -0.2
TRPS1-201ENST00000220888 TAOK2Q9UL54 1235 aa13.77□□□□□ -0.2
TRPS1-201ENST00000220888 BECN1Q14457 450 aa13.76□□□□□ -0.21
TRPS1-201ENST00000220888 FGD1P98174 961 aa13.76□□□□□ -0.21
TRPS1-201ENST00000220888 ISY1Q9ULR0 285 aaKnown RBP13.75□□□□□ -0.21
TRPS1-201ENST00000220888 NEUROD2Q15784 382 aa13.75□□□□□ -0.21
TRPS1-201ENST00000220888 NCBP3Q53F19 620 aaKnown RBP13.75□□□□□ -0.21
TRPS1-201ENST00000220888 TMX4Q9H1E5 349 aaPredicted RBP13.74□□□□□ -0.21
TRPS1-201ENST00000220888 CLSTN1O94985 981 aa13.74□□□□□ -0.21
TRPS1-201ENST00000220888 CARD11Q9BXL7 1154 aa13.73□□□□□ -0.21
TRPS1-201ENST00000220888 SOX12O15370 315 aa13.72□□□□□ -0.21
TRPS1-201ENST00000220888 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
TRPS1-201ENST00000220888 PNNQ9H307 717 aaKnown RBP13.72□□□□□ -0.21
TRPS1-201ENST00000220888 KANK1Q14678 1352 aa13.71□□□□□ -0.21
TRPS1-201ENST00000220888 CHMP4BQ9H444 224 aaKnown RBP13.71□□□□□ -0.21
TRPS1-201ENST00000220888 HIRIP3Q9BW71 556 aaPredicted RBP13.71□□□□□ -0.22
TRPS1-201ENST00000220888 KCNJ4P48050 445 aa13.7□□□□□ -0.22
TRPS1-201ENST00000220888 U2SURPO15042 1029 aaKnown RBP13.7□□□□□ -0.22
TRPS1-201ENST00000220888 NAP1L2Q9ULW6 460 aaPredicted RBP13.7□□□□□ -0.22
TRPS1-201ENST00000220888 TNNT2P45379 298 aaPredicted RBP13.7□□□□□ -0.22
TRPS1-201ENST00000220888 CSB-PGBD3P0DP91 1061 aa13.69□□□□□ -0.22
TRPS1-201ENST00000220888 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
TRPS1-201ENST00000220888 CLIP1P30622 1438 aa13.69□□□□□ -0.22
TRPS1-201ENST00000220888 SRPK2P78362 688 aaKnown RBP13.67□□□□□ -0.22
TRPS1-201ENST00000220888 ANP32EQ9BTT0 268 aa13.67□□□□□ -0.22
TRPS1-201ENST00000220888 PTMAP06454 111 aaKnown RBP13.65□□□□□ -0.22
TRPS1-201ENST00000220888 NBR1Q14596 966 aa13.65□□□□□ -0.22
TRPS1-201ENST00000220888 GLIPR1L2Q4G1C9 344 aa13.65□□□□□ -0.22
TRPS1-201ENST00000220888 TRIM44Q96DX7 344 aaPredicted RBP13.64□□□□□ -0.23
TRPS1-201ENST00000220888 DDRGK1Q96HY6 314 aa13.64□□□□□ -0.23
TRPS1-201ENST00000220888 ZCCHC6Q5VYS8 1495 aaKnown RBP13.64□□□□□ -0.23
TRPS1-201ENST00000220888 PAK3O75914 559 aaPredicted RBP13.64□□□□□ -0.23
TRPS1-201ENST00000220888 IRX6P78412 446 aaPredicted RBP13.63□□□□□ -0.23
TRPS1-201ENST00000220888 MS4A1P11836 297 aa13.63□□□□□ -0.23
TRPS1-201ENST00000220888 GGT6Q6P531 493 aa13.63□□□□□ -0.23
TRPS1-201ENST00000220888 RTF1Q92541 710 aaKnown RBP13.63□□□□□ -0.23
TRPS1-201ENST00000220888 ZNF330Q9Y3S2 320 aaPredicted RBP13.63□□□□□ -0.23
TRPS1-201ENST00000220888 FRAT1Q92837 279 aaPredicted RBP13.61□□□□□ -0.23
TRPS1-201ENST00000220888 AEBP2Q6ZN18 517 aaPredicted RBP13.61□□□□□ -0.23
TRPS1-201ENST00000220888 SAFB2Q14151 953 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRPS1-201ENST00000220888 RB1CC1Q8TDY2 1594 aa13.6□□□□□ -0.23
TRPS1-201ENST00000220888 GOLGA6L6A8MZA4 724 aa13.59□□□□□ -0.23
TRPS1-201ENST00000220888 CCNB3Q8WWL7 1395 aa13.59□□□□□ -0.23
TRPS1-201ENST00000220888 G3V3G9 751 aa13.58□□□□□ -0.24
TRPS1-201ENST00000220888 DCAF8Q5TAQ9 597 aa13.58□□□□□ -0.24
TRPS1-201ENST00000220888 KIF27Q86VH2 1401 aa13.57□□□□□ -0.24
TRPS1-201ENST00000220888 SENP3-EIF4A1A0A087X0R7 540 aa13.57□□□□□ -0.24
TRPS1-201ENST00000220888 STK26Q9P289 416 aa13.57□□□□□ -0.24
TRPS1-201ENST00000220888 TMF1P82094 1093 aa13.56□□□□□ -0.24
TRPS1-201ENST00000220888 HDGFL2Q7Z4V5 671 aaPredicted RBP13.56□□□□□ -0.24
TRPS1-201ENST00000220888 NRDCO43847 1150 aa13.56□□□□□ -0.24
TRPS1-201ENST00000220888 BAZ1BQ9UIG0 1483 aaKnown RBP13.56□□□□□ -0.24
TRPS1-201ENST00000220888 CC2D1BQ5T0F9 858 aaKnown RBP13.55□□□□□ -0.24
TRPS1-201ENST00000220888 GOLGA6L4A6NEF3 574 aa13.55□□□□□ -0.24
TRPS1-201ENST00000220888 PLCB2Q00722 1185 aa13.55□□□□□ -0.24
TRPS1-201ENST00000220888 DNTTIP2Q5QJE6 756 aaKnown RBP13.54□□□□□ -0.24
TRPS1-201ENST00000220888 MORC1Q86VD1 984 aa13.53□□□□□ -0.24
TRPS1-201ENST00000220888 EID1Q9Y6B2 187 aa13.53□□□□□ -0.24
TRPS1-201ENST00000220888 GNL2Q13823 731 aaKnown RBP13.52□□□□□ -0.24
TRPS1-201ENST00000220888 DCAF11Q8TEB1 546 aa13.51□□□□□ -0.25
TRPS1-201ENST00000220888 MCCP23508 829 aa13.5□□□□□ -0.25
TRPS1-201ENST00000220888 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
TRPS1-201ENST00000220888 GOLGA3Q08378 1498 aa13.5□□□□□ -0.25
TRPS1-201ENST00000220888 HSP90AB1P08238 724 aaKnown RBP13.49□□□□□ -0.25
TRPS1-201ENST00000220888 EEA1Q15075 1411 aa13.49□□□□□ -0.25
TRPS1-201ENST00000220888 RGS3P49796 1198 aa13.48□□□□□ -0.25
TRPS1-201ENST00000220888 GTF2E1P29083 439 aaPredicted RBP13.48□□□□□ -0.25
TRPS1-201ENST00000220888 TAF7LQ5H9L4 462 aa13.48□□□□□ -0.25
TRPS1-201ENST00000220888 GORABQ5T7V8 394 aa13.48□□□□□ -0.25
TRPS1-201ENST00000220888 PRM3Q9NNZ6 103 aa13.47□□□□□ -0.25
TRPS1-201ENST00000220888 EIF4G1Q04637 1599 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms