RNA–Protein interactions for RNA: ENST00000220849.9

EIF3E-201, Transcript of eukaryotic translation initiation factor 3 subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3E, Length 1,543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3E-201ENST00000220849 LCE2DQ5TA82 110 aaPredicted RBP14.25□□□□□ -0.13
EIF3E-201ENST00000220849 NPM1P06748 294 aaKnown RBP eCLIP14.25□□□□□ -0.13
EIF3E-201ENST00000220849 ATMINO43313 823 aaPredicted RBP14.23□□□□□ -0.13
EIF3E-201ENST00000220849 MS4A3Q96HJ5 214 aa14.21□□□□□ -0.13
EIF3E-201ENST00000220849 MNX1P50219 401 aaPredicted RBP14.2□□□□□ -0.14
EIF3E-201ENST00000220849 FAM163AQ96GL9 167 aaPredicted RBP14.13□□□□□ -0.15
EIF3E-201ENST00000220849 SCUBE2Q9NQ36 999 aa14.13□□□□□ -0.15
EIF3E-201ENST00000220849 SPDYE4A6NLX3 237 aa14.04□□□□□ -0.16
EIF3E-201ENST00000220849 ATN1P54259 1190 aaPredicted RBP14.04□□□□□ -0.16
EIF3E-201ENST00000220849 POTEFA5A3E0 1075 aa13.99□□□□□ -0.17
EIF3E-201ENST00000220849 CCDC61Q9Y6R9 512 aa13.95□□□□□ -0.18
EIF3E-201ENST00000220849 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
EIF3E-201ENST00000220849 CDAN1Q8IWY9 1227 aa13.91□□□□□ -0.18
EIF3E-201ENST00000220849 TSPYL2Q9H2G4 693 aaPredicted RBP13.91□□□□□ -0.18
EIF3E-201ENST00000220849 KIF12Q96FN5 646 aa13.9□□□□□ -0.18
EIF3E-201ENST00000220849 TIE1P35590 1138 aa13.86□□□□□ -0.19
EIF3E-201ENST00000220849 TRPC6Q9Y210 931 aa13.84□□□□□ -0.19
EIF3E-201ENST00000220849 CSRNP3Q8WYN3 585 aa13.8□□□□□ -0.2
EIF3E-201ENST00000220849 COLQQ9Y215 455 aaPredicted RBP13.79□□□□□ -0.2
EIF3E-201ENST00000220849 MAP3K13O43283 966 aa13.75□□□□□ -0.21
EIF3E-201ENST00000220849 SEC24BO95487 1268 aa13.75□□□□□ -0.21
EIF3E-201ENST00000220849 TTLL13PA6NNM8 815 aa13.74□□□□□ -0.21
EIF3E-201ENST00000220849 IER5LQ5T953 404 aa13.71□□□□□ -0.21
EIF3E-201ENST00000220849 ST18O60284 1047 aa13.7□□□□□ -0.22
EIF3E-201ENST00000220849 PROM2Q8N271 834 aa13.65□□□□□ -0.22
EIF3E-201ENST00000220849 SLAIN1Q8ND83 568 aa13.65□□□□□ -0.22
EIF3E-201ENST00000220849 MMRN1Q13201 1228 aa13.64□□□□□ -0.23
EIF3E-201ENST00000220849 TRIM35Q9UPQ4 493 aa13.64□□□□□ -0.23
EIF3E-201ENST00000220849 RASEFQ8IZ41 740 aa13.62□□□□□ -0.23
EIF3E-201ENST00000220849 SGIP1Q9BQI5 828 aa13.61□□□□□ -0.23
EIF3E-201ENST00000220849 SPNS2Q8IVW8 549 aa13.6□□□□□ -0.23
EIF3E-201ENST00000220849 TMEM121BQ9BXQ6 578 aaPredicted RBP13.54□□□□□ -0.24
EIF3E-201ENST00000220849 PLEKHG5O94827 1062 aa13.53□□□□□ -0.24
EIF3E-201ENST00000220849 PCDHB13Q9Y5F0 798 aa13.51□□□□□ -0.25
EIF3E-201ENST00000220849 PLCG2P16885 1265 aa13.49□□□□□ -0.25
EIF3E-201ENST00000220849 MIER1Q8N108 512 aa13.45□□□□□ -0.26
EIF3E-201ENST00000220849 SNPHO15079 494 aa13.44□□□□□ -0.26
EIF3E-201ENST00000220849 IRX5P78411 483 aaPredicted RBP13.44□□□□□ -0.26
EIF3E-201ENST00000220849 IFNL1Q8IU54 200 aa13.42□□□□□ -0.26
EIF3E-201ENST00000220849 TMEM106CQ9BVX2 250 aa13.42□□□□□ -0.26
EIF3E-201ENST00000220849 MARVELD3Q96A59 401 aa13.35□□□□□ -0.27
EIF3E-201ENST00000220849 NUBP1P53384 320 aa13.34□□□□□ -0.27
EIF3E-201ENST00000220849 OCEL1Q9H607 264 aa13.34□□□□□ -0.27
EIF3E-201ENST00000220849 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.34□□□□□ -0.27
EIF3E-201ENST00000220849 ZBTB47Q9UFB7 747 aaPredicted RBP13.27□□□□□ -0.29
EIF3E-201ENST00000220849 PLCD3Q8N3E9 789 aa13.26□□□□□ -0.29
EIF3E-201ENST00000220849 FAM212AQ96EL1 285 aa13.23□□□□□ -0.29
EIF3E-201ENST00000220849 KRTAP3-3Q9BYR6 98 aa13.23□□□□□ -0.29
EIF3E-201ENST00000220849 KRTAP3-2Q9BYR7 98 aa13.23□□□□□ -0.29
EIF3E-201ENST00000220849 EMP3P54852 163 aa13.23□□□□□ -0.29
EIF3E-201ENST00000220849 POTEB3A0JP26 581 aa13.18□□□□□ -0.3
EIF3E-201ENST00000220849 POTEBQ6S5H4 581 aa13.18□□□□□ -0.3
EIF3E-201ENST00000220849 HS3ST6Q96QI5 342 aa13.18□□□□□ -0.3
EIF3E-201ENST00000220849 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
EIF3E-201ENST00000220849 C3orf67Q6ZVT6 689 aa13.12□□□□□ -0.31
EIF3E-201ENST00000220849 PDCD7Q8N8D1 485 aaKnown RBP13.12□□□□□ -0.31
EIF3E-201ENST00000220849 FAM205CA6NFA0 338 aa13.11□□□□□ -0.31
EIF3E-201ENST00000220849 L3MBTL3Q96JM7 780 aaPredicted RBP13.08□□□□□ -0.32
EIF3E-201ENST00000220849 PCDHB8Q9UN66 801 aa13.04□□□□□ -0.32
EIF3E-201ENST00000220849 PYGBP11216 843 aa13.03□□□□□ -0.32
EIF3E-201ENST00000220849 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
EIF3E-201ENST00000220849 MKRN3Q13064 507 aaKnown RBP12.96□□□□□ -0.33
EIF3E-201ENST00000220849 GOLGA2Q08379 1002 aa12.93□□□□□ -0.34
EIF3E-201ENST00000220849 RNF166Q96A37 237 aaPredicted RBP12.93□□□□□ -0.34
EIF3E-201ENST00000220849 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.91□□□□□ -0.34
EIF3E-201ENST00000220849 HOXB3P14651 431 aaPredicted RBP12.9□□□□□ -0.34
EIF3E-201ENST00000220849 ZNF467Q7Z7K2 595 aaPredicted RBP12.9□□□□□ -0.34
EIF3E-201ENST00000220849 ILDR1Q86SU0 546 aaPredicted RBP12.88□□□□□ -0.35
EIF3E-201ENST00000220849 HOXB1P14653 301 aaPredicted RBP12.88□□□□□ -0.35
EIF3E-201ENST00000220849 ERBB3P21860 1342 aa12.82□□□□□ -0.36
EIF3E-201ENST00000220849 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
EIF3E-201ENST00000220849 ZNF710Q8N1W2 664 aa12.79□□□□□ -0.36
EIF3E-201ENST00000220849 PSEN1P49768 467 aa12.78□□□□□ -0.36
EIF3E-201ENST00000220849 DOK7Q18PE1 504 aa12.78□□□□□ -0.36
EIF3E-201ENST00000220849 DPY19L2Q6NUT2 758 aa12.77□□□□□ -0.37
EIF3E-201ENST00000220849 CHRM1P11229 460 aaPredicted RBP12.76□□□□□ -0.37
EIF3E-201ENST00000220849 GSE1Q14687 1217 aa12.76□□□□□ -0.37
EIF3E-201ENST00000220849 BOLA1Q9Y3E2 137 aa12.76□□□□□ -0.37
EIF3E-201ENST00000220849 G3V3G9 751 aa12.73□□□□□ -0.37
EIF3E-201ENST00000220849 VARS2Q5ST30 1063 aaKnown RBP12.71□□□□□ -0.38
EIF3E-201ENST00000220849 PTGER2P43116 358 aa12.7□□□□□ -0.38
EIF3E-201ENST00000220849 RIMBP2O15034 1052 aa12.67□□□□□ -0.38
EIF3E-201ENST00000220849 ZNF687Q8N1G0 1237 aa12.67□□□□□ -0.38
EIF3E-201ENST00000220849 PDAP1Q13442 181 aaKnown RBP12.67□□□□□ -0.38
EIF3E-201ENST00000220849 ZSWIM6Q9HCJ5 1215 aa12.62□□□□□ -0.39
EIF3E-201ENST00000220849 CABP2Q9NPB3 220 aa12.62□□□□□ -0.39
EIF3E-201ENST00000220849 FBXO3Q9UK99 471 aa12.57□□□□□ -0.4
EIF3E-201ENST00000220849 FKBP8Q14318 412 aa12.54□□□□□ -0.4
EIF3E-201ENST00000220849 GPR153Q6NV75 609 aa12.53□□□□□ -0.4
EIF3E-201ENST00000220849 KLHL34Q8N239 644 aa12.52□□□□□ -0.4
EIF3E-201ENST00000220849 TMEM92Q6UXU6 159 aa12.48□□□□□ -0.41
EIF3E-201ENST00000220849 ANKRD13DQ6ZTN6 518 aa12.47□□□□□ -0.41
EIF3E-201ENST00000220849 VASPP50552 380 aaPredicted RBP12.43□□□□□ -0.42
EIF3E-201ENST00000220849 MICALL2Q8IY33 904 aa12.43□□□□□ -0.42
EIF3E-201ENST00000220849 LSM11P83369 360 aaKnown RBP eCLIP12.42□□□□□ -0.42
EIF3E-201ENST00000220849 PLA2G2EQ9NZK7 142 aa12.42□□□□□ -0.42
EIF3E-201ENST00000220849 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
EIF3E-201ENST00000220849 EFCAB3Q8N7B9 438 aa12.38□□□□□ -0.43
EIF3E-201ENST00000220849 ARSIQ5FYB1 569 aa12.37□□□□□ -0.43
EIF3E-201ENST00000220849 HCSTQ9UBK5 93 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms