RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 KDM2AQ9Y2K7 1162 aa22.57■■□□□ 1.2
ITGB4-201ENST00000200181 CHIC2Q9UKJ5 165 aa22.56■■□□□ 1.2
ITGB4-201ENST00000200181 MIER1Q8N108 512 aa22.56■■□□□ 1.2
ITGB4-201ENST00000200181 A0A0G2JS52 829 aa22.53■■□□□ 1.2
ITGB4-201ENST00000200181 TPRNQ4KMQ1 711 aa22.53■■□□□ 1.2
ITGB4-201ENST00000200181 PPM1GO15355 546 aaPredicted RBP22.52■■□□□ 1.2
ITGB4-201ENST00000200181 CASC1Q6TDU7 716 aa22.5■■□□□ 1.19
ITGB4-201ENST00000200181 ZBTB7CA1YPR0 619 aa22.46■■□□□ 1.19
ITGB4-201ENST00000200181 LAS1LQ9Y4W2 734 aaKnown RBP22.45■■□□□ 1.18
ITGB4-201ENST00000200181 HIRIP3Q9BW71 556 aaPredicted RBP22.44■■□□□ 1.18
ITGB4-201ENST00000200181 ABCC9O60706 1549 aa22.44■■□□□ 1.18
ITGB4-201ENST00000200181 NPM1P06748 294 aaKnown RBP eCLIP22.43■■□□□ 1.18
ITGB4-201ENST00000200181 EIF4G2P78344 907 aaKnown RBP eCLIP22.42■■□□□ 1.18
ITGB4-201ENST00000200181 DCAF1Q9Y4B6 1507 aa22.4■■□□□ 1.18
ITGB4-201ENST00000200181 TULP1O00294 542 aaPredicted RBP22.4■■□□□ 1.18
ITGB4-201ENST00000200181 AMER1Q5JTC6 1135 aaPredicted RBP22.4■■□□□ 1.18
ITGB4-201ENST00000200181 PLCB2Q00722 1185 aa22.39■■□□□ 1.17
ITGB4-201ENST00000200181 GOLGA6L6A8MZA4 724 aa22.39■■□□□ 1.17
ITGB4-201ENST00000200181 TSPY4P0CV99 314 aa22.38■■□□□ 1.17
ITGB4-201ENST00000200181 TSPY10P0CW01 314 aa22.38■■□□□ 1.17
ITGB4-201ENST00000200181 C14orf37Q86TY3 774 aa22.36■■□□□ 1.17
ITGB4-201ENST00000200181 FTSJ3Q8IY81 847 aaKnown RBP22.35■■□□□ 1.17
ITGB4-201ENST00000200181 PLEKHG5O94827 1062 aa22.32■■□□□ 1.16
ITGB4-201ENST00000200181 CFAP53Q96M91 514 aa22.32■■□□□ 1.16
ITGB4-201ENST00000200181 SENP3-EIF4A1A0A087X0R7 540 aa22.32■■□□□ 1.16
ITGB4-201ENST00000200181 NOP58Q9Y2X3 529 aaKnown RBP22.3■■□□□ 1.16
ITGB4-201ENST00000200181 SUPT16HQ9Y5B9 1047 aaKnown RBP22.29■■□□□ 1.16
ITGB4-201ENST00000200181 NRDCO43847 1150 aa22.28■■□□□ 1.16
ITGB4-201ENST00000200181 HSP90AB1P08238 724 aaKnown RBP22.27■■□□□ 1.16
ITGB4-201ENST00000200181 MTUS2Q5JR59 1369 aa22.24■■□□□ 1.15
ITGB4-201ENST00000200181 CHAF1AQ13111 956 aaPredicted RBP22.24■■□□□ 1.15
ITGB4-201ENST00000200181 RGS3P49796 1198 aa22.23■■□□□ 1.15
ITGB4-201ENST00000200181 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
ITGB4-201ENST00000200181 TAOK2Q9UL54 1235 aa22.23■■□□□ 1.15
ITGB4-201ENST00000200181 PPP1R15AO75807 674 aaPredicted RBP22.22■■□□□ 1.15
ITGB4-201ENST00000200181 PPP4R2Q9NY27 417 aa22.21■■□□□ 1.15
ITGB4-201ENST00000200181 KNSTRNQ9Y448 316 aa22.2■■□□□ 1.14
ITGB4-201ENST00000200181 ARID4BQ4LE39 1312 aaPredicted RBP22.17■■□□□ 1.14
ITGB4-201ENST00000200181 MSNP26038 577 aaKnown RBP22.17■■□□□ 1.14
ITGB4-201ENST00000200181 FGD1P98174 961 aa22.17■■□□□ 1.14
ITGB4-201ENST00000200181 RRP7BPQ9NSQ0 103 aa22.16■■□□□ 1.14
ITGB4-201ENST00000200181 CDCA8Q53HL2 280 aa22.16■■□□□ 1.14
ITGB4-201ENST00000200181 MAPK8IP3Q9UPT6 1336 aa22.15■■□□□ 1.14
ITGB4-201ENST00000200181 DEKP35659 375 aaKnown RBP22.15■■□□□ 1.14
ITGB4-201ENST00000200181 NEUROD2Q15784 382 aa22.14■■□□□ 1.13
ITGB4-201ENST00000200181 L1TD1Q5T7N2 865 aaKnown RBP22.14■■□□□ 1.13
ITGB4-201ENST00000200181 GOLGA6L4A6NEF3 574 aa22.13■■□□□ 1.13
ITGB4-201ENST00000200181 FRAT1Q92837 279 aaPredicted RBP22.13■■□□□ 1.13
ITGB4-201ENST00000200181 CHMP4BQ9H444 224 aaKnown RBP22.12■■□□□ 1.13
ITGB4-201ENST00000200181 NAP1L2Q9ULW6 460 aaPredicted RBP22.12■■□□□ 1.13
ITGB4-201ENST00000200181 HAP1P54257 671 aaPredicted RBP22.11■■□□□ 1.13
ITGB4-201ENST00000200181 OS9Q13438 667 aaPredicted RBP22.11■■□□□ 1.13
ITGB4-201ENST00000200181 HSCBQ8IWL3 235 aa22.11■■□□□ 1.13
ITGB4-201ENST00000200181 KCNJ4P48050 445 aa22.11■■□□□ 1.13
ITGB4-201ENST00000200181 RGL3Q3MIN7 710 aa22.09■■□□□ 1.13
ITGB4-201ENST00000200181 DRC7Q8IY82 874 aa22.07■■□□□ 1.12
ITGB4-201ENST00000200181 NUDCQ9Y266 331 aa22.07■■□□□ 1.12
ITGB4-201ENST00000200181 MS4A1P11836 297 aa22.06■■□□□ 1.12
ITGB4-201ENST00000200181 CARD11Q9BXL7 1154 aa22.02■■□□□ 1.12
ITGB4-201ENST00000200181 ARID3AQ99856 593 aa22.01■■□□□ 1.11
ITGB4-201ENST00000200181 B4GALNT3Q6L9W6 998 aa21.99■■□□□ 1.11
ITGB4-201ENST00000200181 SPRYD3Q8NCJ5 442 aa21.99■■□□□ 1.11
ITGB4-201ENST00000200181 NPHP1O15259 732 aa21.98■■□□□ 1.11
ITGB4-201ENST00000200181 MCCP23508 829 aa21.98■■□□□ 1.11
ITGB4-201ENST00000200181 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.98■■□□□ 1.11
ITGB4-201ENST00000200181 CLIP1P30622 1438 aa21.97■■□□□ 1.11
ITGB4-201ENST00000200181 CLSTN1O94985 981 aa21.97■■□□□ 1.11
ITGB4-201ENST00000200181 GOLGA2Q08379 1002 aa21.95■■□□□ 1.1
ITGB4-201ENST00000200181 PNNQ9H307 717 aaKnown RBP21.94■■□□□ 1.1
ITGB4-201ENST00000200181 NCBP3Q53F19 620 aaKnown RBP21.93■■□□□ 1.1
ITGB4-201ENST00000200181 RSF1Q96T23 1441 aaPredicted RBP21.92■■□□□ 1.1
ITGB4-201ENST00000200181 CC2D1BQ5T0F9 858 aaKnown RBP21.91■■□□□ 1.1
ITGB4-201ENST00000200181 U2SURPO15042 1029 aaKnown RBP21.9■■□□□ 1.1
ITGB4-201ENST00000200181 CHMP7Q8WUX9 453 aaPredicted RBP21.9■■□□□ 1.1
ITGB4-201ENST00000200181 KCNH8Q96L42 1107 aa21.89■■□□□ 1.09
ITGB4-201ENST00000200181 CFAP44Q96MT7 982 aa21.87■■□□□ 1.09
ITGB4-201ENST00000200181 KIAA2012Q0VF49 1180 aa21.87■■□□□ 1.09
ITGB4-201ENST00000200181 POGKQ9P215 609 aa21.86■■□□□ 1.09
ITGB4-201ENST00000200181 PTMSP20962 102 aa21.86■■□□□ 1.09
ITGB4-201ENST00000200181 TNNT3P45378 269 aaPredicted RBP21.86■■□□□ 1.09
ITGB4-201ENST00000200181 GNL2Q13823 731 aaKnown RBP21.85■■□□□ 1.09
ITGB4-201ENST00000200181 LMOD2Q6P5Q4 547 aa21.85■■□□□ 1.09
ITGB4-201ENST00000200181 PLEKHD1A6NEE1 506 aa21.84■■□□□ 1.09
ITGB4-201ENST00000200181 RBM19Q9Y4C8 960 aaKnown RBP21.84■■□□□ 1.09
ITGB4-201ENST00000200181 NOC3LQ8WTT2 800 aaKnown RBP21.83■■□□□ 1.08
ITGB4-201ENST00000200181 GBP4Q96PP9 640 aa21.83■■□□□ 1.08
ITGB4-201ENST00000200181 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
ITGB4-201ENST00000200181 ZCCHC6Q5VYS8 1495 aaKnown RBP21.79■■□□□ 1.08
ITGB4-201ENST00000200181 GZF1Q9H116 711 aaPredicted RBP21.79■■□□□ 1.08
ITGB4-201ENST00000200181 ISY1Q9ULR0 285 aaKnown RBP21.77■■□□□ 1.08
ITGB4-201ENST00000200181 CFDP1Q9UEE9 299 aaPredicted RBP21.75■■□□□ 1.07
ITGB4-201ENST00000200181 KIAA1211Q6ZU35 1233 aa21.74■■□□□ 1.07
ITGB4-201ENST00000200181 SYAP1Q96A49 352 aaPredicted RBP21.73■■□□□ 1.07
ITGB4-201ENST00000200181 HTATSF1O43719 755 aaKnown RBP21.72■■□□□ 1.07
ITGB4-201ENST00000200181 TMF1P82094 1093 aa21.71■■□□□ 1.07
ITGB4-201ENST00000200181 SIN3AQ96ST3 1273 aa21.71■■□□□ 1.07
ITGB4-201ENST00000200181 TPM4P67936 248 aa21.71■■□□□ 1.07
ITGB4-201ENST00000200181 GOLGA6L1Q8N7Z2 621 aa21.71■■□□□ 1.07
ITGB4-201ENST00000200181 GOLGA3Q08378 1498 aa21.7■■□□□ 1.06
ITGB4-201ENST00000200181 CEP162Q5TB80 1403 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms