RNA–Protein interactions for RNA: ENST00000173898.11

TRO-201, Transcript of trophinin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRO, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-201ENST00000173898 WRNQ14191 1432 aaPredicted RBP eCLIP16.11■□□□□ 0.17
TRO-201ENST00000173898 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.1■□□□□ 0.17
TRO-201ENST00000173898 TNIKQ9UKE5 1360 aa16.08■□□□□ 0.17
TRO-201ENST00000173898 NBR1Q14596 966 aa16.07■□□□□ 0.16
TRO-201ENST00000173898 PLPPR3Q6T4P5 718 aa16.05■□□□□ 0.16
TRO-201ENST00000173898 EIF5BO60841 1220 aaKnown RBP16.01■□□□□ 0.15
TRO-201ENST00000173898 RGL3Q3MIN7 710 aa16.01■□□□□ 0.15
TRO-201ENST00000173898 ANP32BQ92688 251 aaKnown RBP16.01■□□□□ 0.15
TRO-201ENST00000173898 PLEKHD1A6NEE1 506 aa16.01■□□□□ 0.15
TRO-201ENST00000173898 SENP3-EIF4A1A0A087X0R7 540 aa16■□□□□ 0.15
TRO-201ENST00000173898 KCNH8Q96L42 1107 aa15.99■□□□□ 0.15
TRO-201ENST00000173898 SIN3AQ96ST3 1273 aa15.99■□□□□ 0.15
TRO-201ENST00000173898 KIF27Q86VH2 1401 aa15.99■□□□□ 0.15
TRO-201ENST00000173898 RB1CC1Q8TDY2 1594 aa15.98■□□□□ 0.15
TRO-201ENST00000173898 CEP164Q9UPV0 1460 aa15.98■□□□□ 0.15
TRO-201ENST00000173898 CFDP1Q9UEE9 299 aaPredicted RBP15.96■□□□□ 0.14
TRO-201ENST00000173898 SUPT16HQ9Y5B9 1047 aaKnown RBP15.95■□□□□ 0.14
TRO-201ENST00000173898 BAZ1BQ9UIG0 1483 aaKnown RBP15.94■□□□□ 0.14
TRO-201ENST00000173898 SENP3Q9H4L4 574 aaPredicted RBP15.93■□□□□ 0.14
TRO-201ENST00000173898 ARXQ96QS3 562 aa15.91■□□□□ 0.14
TRO-201ENST00000173898 CARD11Q9BXL7 1154 aa15.9■□□□□ 0.14
TRO-201ENST00000173898 CECR2Q9BXF3 1484 aa15.89■□□□□ 0.13
TRO-201ENST00000173898 NACADO15069 1562 aa15.87■□□□□ 0.13
TRO-201ENST00000173898 SOGA1O94964 1423 aa15.86■□□□□ 0.13
TRO-201ENST00000173898 CCNB3Q8WWL7 1395 aa15.85■□□□□ 0.13
TRO-201ENST00000173898 KNSTRNQ9Y448 316 aa15.85■□□□□ 0.13
TRO-201ENST00000173898 MYH16Q9H6N6 1097 aa15.83■□□□□ 0.12
TRO-201ENST00000173898 CDCA8Q53HL2 280 aa15.82■□□□□ 0.12
TRO-201ENST00000173898 BAZ1AQ9NRL2 1556 aaPredicted RBP15.8■□□□□ 0.12
TRO-201ENST00000173898 PPP1R15AO75807 674 aaPredicted RBP15.79■□□□□ 0.12
TRO-201ENST00000173898 CFAP53Q96M91 514 aa15.78■□□□□ 0.12
TRO-201ENST00000173898 NEUROD2Q15784 382 aa15.77■□□□□ 0.12
TRO-201ENST00000173898 PPP4R2Q9NY27 417 aa15.77■□□□□ 0.12
TRO-201ENST00000173898 DDRGK1Q96HY6 314 aa15.77■□□□□ 0.11
TRO-201ENST00000173898 CARMIL1Q5VZK9 1371 aa15.76■□□□□ 0.11
TRO-201ENST00000173898 BECN1Q14457 450 aa15.76■□□□□ 0.11
TRO-201ENST00000173898 FHAD1B1AJZ9 1412 aa15.75■□□□□ 0.11
TRO-201ENST00000173898 TIMELESSQ9UNS1 1208 aa15.75■□□□□ 0.11
TRO-201ENST00000173898 PLEKHG5O94827 1062 aa15.74■□□□□ 0.11
TRO-201ENST00000173898 ANP32EQ9BTT0 268 aa15.74■□□□□ 0.11
TRO-201ENST00000173898 PPM1GO15355 546 aaPredicted RBP15.74■□□□□ 0.11
TRO-201ENST00000173898 KANK4Q5T7N3 995 aaPredicted RBP15.73■□□□□ 0.11
TRO-201ENST00000173898 C14orf37Q86TY3 774 aa15.71■□□□□ 0.11
TRO-201ENST00000173898 B4GALNT3Q6L9W6 998 aa15.71■□□□□ 0.11
TRO-201ENST00000173898 CUX2O14529 1486 aa15.71■□□□□ 0.1
TRO-201ENST00000173898 CC2D1BQ5T0F9 858 aaKnown RBP15.7■□□□□ 0.1
TRO-201ENST00000173898 VPS8Q8N3P4 1428 aa15.7■□□□□ 0.1
TRO-201ENST00000173898 DCAF11Q8TEB1 546 aa15.7■□□□□ 0.1
TRO-201ENST00000173898 ZBTB7CA1YPR0 619 aa15.7■□□□□ 0.1
TRO-201ENST00000173898 RGS3P49796 1198 aa15.68■□□□□ 0.1
TRO-201ENST00000173898 FTSJ3Q8IY81 847 aaKnown RBP15.68■□□□□ 0.1
TRO-201ENST00000173898 TNNT2P45379 298 aaPredicted RBP15.68■□□□□ 0.1
TRO-201ENST00000173898 FRAT1Q92837 279 aaPredicted RBP15.66■□□□□ 0.1
TRO-201ENST00000173898 SETD5Q9C0A6 1442 aa15.66■□□□□ 0.1
TRO-201ENST00000173898 CCER2I3L3R5 266 aa15.66■□□□□ 0.1
TRO-201ENST00000173898 NUDCQ9Y266 331 aa15.64■□□□□ 0.09
TRO-201ENST00000173898 MAPK8IP3Q9UPT6 1336 aa15.64■□□□□ 0.09
TRO-201ENST00000173898 MROH2BQ7Z745 1585 aa15.64■□□□□ 0.09
TRO-201ENST00000173898 HSPA5P11021 654 aaKnown RBP15.64■□□□□ 0.09
TRO-201ENST00000173898 CCDC88BA6NC98 1476 aa15.64■□□□□ 0.09
TRO-201ENST00000173898 LAS1LQ9Y4W2 734 aaKnown RBP15.63■□□□□ 0.09
TRO-201ENST00000173898 GLIPR1L2Q4G1C9 344 aa15.62■□□□□ 0.09
TRO-201ENST00000173898 TMF1P82094 1093 aa15.62■□□□□ 0.09
TRO-201ENST00000173898 POGKQ9P215 609 aa15.62■□□□□ 0.09
TRO-201ENST00000173898 A0A0G2JS52 829 aa15.62■□□□□ 0.09
TRO-201ENST00000173898 GOLGA6L22H0YM25 854 aa15.62■□□□□ 0.09
TRO-201ENST00000173898 FOXD1Q16676 465 aa15.61■□□□□ 0.09
TRO-201ENST00000173898 ABCC8Q09428 1581 aa15.61■□□□□ 0.09
TRO-201ENST00000173898 TRIM44Q96DX7 344 aaPredicted RBP15.6■□□□□ 0.09
TRO-201ENST00000173898 ARID4BQ4LE39 1312 aaPredicted RBP15.59■□□□□ 0.09
TRO-201ENST00000173898 U2SURPO15042 1029 aaKnown RBP15.59■□□□□ 0.09
TRO-201ENST00000173898 PKD2Q13563 968 aa15.58■□□□□ 0.09
TRO-201ENST00000173898 NOP58Q9Y2X3 529 aaKnown RBP15.58■□□□□ 0.09
TRO-201ENST00000173898 NCLP19338 710 aaKnown RBP15.58■□□□□ 0.08
TRO-201ENST00000173898 RAB3GAP2Q9H2M9 1393 aa15.58■□□□□ 0.08
TRO-201ENST00000173898 EIF4G1Q04637 1599 aaKnown RBP15.56■□□□□ 0.08
TRO-201ENST00000173898 ARHGAP35Q9NRY4 1499 aa15.55■□□□□ 0.08
TRO-201ENST00000173898 ERCC6Q03468 1493 aa15.53■□□□□ 0.08
TRO-201ENST00000173898 RBM19Q9Y4C8 960 aaKnown RBP15.53■□□□□ 0.08
TRO-201ENST00000173898 MPHOSPH9Q99550 1183 aa15.53■□□□□ 0.08
TRO-201ENST00000173898 CASC1Q6TDU7 716 aa15.52■□□□□ 0.08
TRO-201ENST00000173898 MS4A1P11836 297 aa15.5■□□□□ 0.07
TRO-201ENST00000173898 TDRD9Q8NDG6 1382 aaKnown RBP15.5■□□□□ 0.07
TRO-201ENST00000173898 MORC1Q86VD1 984 aa15.48■□□□□ 0.07
TRO-201ENST00000173898 SAFB2Q14151 953 aaKnown RBP eCLIP15.48■□□□□ 0.07
TRO-201ENST00000173898 TPRNQ4KMQ1 711 aa15.48■□□□□ 0.07
TRO-201ENST00000173898 LMOD2Q6P5Q4 547 aa15.48■□□□□ 0.07
TRO-201ENST00000173898 CHMP4BQ9H444 224 aaKnown RBP15.47■□□□□ 0.07
TRO-201ENST00000173898 SRPK2P78362 688 aaKnown RBP15.47■□□□□ 0.07
TRO-201ENST00000173898 ERICH6BQ5W0A0 696 aa15.46■□□□□ 0.07
TRO-201ENST00000173898 KANK1Q14678 1352 aa15.46■□□□□ 0.07
TRO-201ENST00000173898 PTMAP06454 111 aaKnown RBP15.45■□□□□ 0.06
TRO-201ENST00000173898 L3MBTL2Q969R5 705 aa15.45■□□□□ 0.06
TRO-201ENST00000173898 NUP155O75694 1391 aa15.45■□□□□ 0.06
TRO-201ENST00000173898 HAP1P54257 671 aaPredicted RBP15.45■□□□□ 0.06
TRO-201ENST00000173898 GGT6Q6P531 493 aa15.45■□□□□ 0.06
TRO-201ENST00000173898 RTN4Q9NQC3 1192 aaKnown RBP15.45■□□□□ 0.06
TRO-201ENST00000173898 FMN1Q68DA7 1419 aa15.45■□□□□ 0.06
TRO-201ENST00000173898 KTN1Q86UP2 1357 aaKnown RBP15.45■□□□□ 0.06
TRO-201ENST00000173898 PNNQ9H307 717 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms