RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 CEP162Q5TB80 1403 aa25.33■■□□□ 1.65
MBD3-201ENST00000156825 EIF4G2P78344 907 aaKnown RBP eCLIP25.3■■□□□ 1.64
MBD3-201ENST00000156825 PLEKHD1A6NEE1 506 aa25.29■■□□□ 1.64
MBD3-201ENST00000156825 WRNQ14191 1432 aaPredicted RBP eCLIP25.25■■□□□ 1.635e-6■■■■■ 46
MBD3-201ENST00000156825 ZBTB7CA1YPR0 619 aa25.23■■□□□ 1.63
MBD3-201ENST00000156825 UPF2Q9HAU5 1272 aaKnown RBP25.21■■□□□ 1.63
MBD3-201ENST00000156825 CCDC180Q9P1Z9 1646 aa25.21■■□□□ 1.63
MBD3-201ENST00000156825 A0A0G2JS52 829 aa25.2■■□□□ 1.63
MBD3-201ENST00000156825 GOLGA3Q08378 1498 aa25.2■■□□□ 1.62
MBD3-201ENST00000156825 CFDP1Q9UEE9 299 aaPredicted RBP25.19■■□□□ 1.62
MBD3-201ENST00000156825 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
MBD3-201ENST00000156825 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.18■■□□□ 1.62
MBD3-201ENST00000156825 NBR1Q14596 966 aa25.18■■□□□ 1.62
MBD3-201ENST00000156825 ARXQ96QS3 562 aa25.17■■□□□ 1.62
MBD3-201ENST00000156825 C14orf37Q86TY3 774 aa25.17■■□□□ 1.62
MBD3-201ENST00000156825 SIN3AQ96ST3 1273 aa25.16■■□□□ 1.62
MBD3-201ENST00000156825 PPP1R15AO75807 674 aaPredicted RBP25.16■■□□□ 1.62
MBD3-201ENST00000156825 BAZ1BQ9UIG0 1483 aaKnown RBP25.13■■□□□ 1.61
MBD3-201ENST00000156825 KIF27Q86VH2 1401 aa25.06■■□□□ 1.6
MBD3-201ENST00000156825 PPM1GO15355 546 aaPredicted RBP25.05■■□□□ 1.6
MBD3-201ENST00000156825 EEA1Q15075 1411 aa25.05■■□□□ 1.6
MBD3-201ENST00000156825 ARID4BQ4LE39 1312 aaPredicted RBP25.03■■□□□ 1.6
MBD3-201ENST00000156825 CARD11Q9BXL7 1154 aa25.02■■□□□ 1.6
MBD3-201ENST00000156825 CECR2Q9BXF3 1484 aa25.01■■□□□ 1.59
MBD3-201ENST00000156825 EIF5BO60841 1220 aaKnown RBP25■■□□□ 1.59
MBD3-201ENST00000156825 TNIKQ9UKE5 1360 aa25■■□□□ 1.59
MBD3-201ENST00000156825 NEUROD2Q15784 382 aa24.99■■□□□ 1.59
MBD3-201ENST00000156825 ANP32BQ92688 251 aaKnown RBP24.97■■□□□ 1.59
MBD3-201ENST00000156825 TNNT2P45379 298 aaPredicted RBP24.93■■□□□ 1.58
MBD3-201ENST00000156825 SUPT16HQ9Y5B9 1047 aaKnown RBP24.93■■□□□ 1.58
MBD3-201ENST00000156825 KNSTRNQ9Y448 316 aa24.93■■□□□ 1.58
MBD3-201ENST00000156825 CEP164Q9UPV0 1460 aa24.92■■□□□ 1.58
MBD3-201ENST00000156825 SOGA1O94964 1423 aa24.89■■□□□ 1.58
MBD3-201ENST00000156825 MYH16Q9H6N6 1097 aa24.88■■□□□ 1.57
MBD3-201ENST00000156825 NACADO15069 1562 aa24.85■■□□□ 1.57
MBD3-201ENST00000156825 ERCC6Q03468 1493 aa24.83■■□□□ 1.57
MBD3-201ENST00000156825 CC2D1BQ5T0F9 858 aaKnown RBP24.82■■□□□ 1.56
MBD3-201ENST00000156825 LAS1LQ9Y4W2 734 aaKnown RBP24.82■■□□□ 1.56
MBD3-201ENST00000156825 LMOD2Q6P5Q4 547 aa24.81■■□□□ 1.56
MBD3-201ENST00000156825 CFAP53Q96M91 514 aa24.79■■□□□ 1.56
MBD3-201ENST00000156825 DCAF11Q8TEB1 546 aa24.77■■□□□ 1.56
MBD3-201ENST00000156825 POGKQ9P215 609 aa24.77■■□□□ 1.56
MBD3-201ENST00000156825 CARMIL1Q5VZK9 1371 aa24.77■■□□□ 1.56
MBD3-201ENST00000156825 CUX2O14529 1486 aa24.76■■□□□ 1.55
MBD3-201ENST00000156825 HAP1P54257 671 aaPredicted RBP24.76■■□□□ 1.55
MBD3-201ENST00000156825 MLECQ14165 292 aa24.75■■□□□ 1.55
MBD3-201ENST00000156825 CDCA8Q53HL2 280 aa24.74■■□□□ 1.55
MBD3-201ENST00000156825 FOXD1Q16676 465 aa24.74■■□□□ 1.55
MBD3-201ENST00000156825 CCNB3Q8WWL7 1395 aa24.74■■□□□ 1.55
MBD3-201ENST00000156825 EIF4G1Q04637 1599 aaKnown RBP24.72■■□□□ 1.55
MBD3-201ENST00000156825 KANK4Q5T7N3 995 aaPredicted RBP24.72■■□□□ 1.55
MBD3-201ENST00000156825 BAZ1AQ9NRL2 1556 aaPredicted RBP24.71■■□□□ 1.55
MBD3-201ENST00000156825 SAFB2Q14151 953 aaKnown RBP eCLIP24.7■■□□□ 1.55
MBD3-201ENST00000156825 FRAT1Q92837 279 aaPredicted RBP24.7■■□□□ 1.55
MBD3-201ENST00000156825 SOX12O15370 315 aa24.68■■□□□ 1.54
MBD3-201ENST00000156825 U2SURPO15042 1029 aaKnown RBP24.67■■□□□ 1.54
MBD3-201ENST00000156825 FTSJ3Q8IY81 847 aaKnown RBP24.67■■□□□ 1.54
MBD3-201ENST00000156825 RGS3P49796 1198 aa24.66■■□□□ 1.54
MBD3-201ENST00000156825 MAPK8IP3Q9UPT6 1336 aa24.64■■□□□ 1.54
MBD3-201ENST00000156825 TPRNQ4KMQ1 711 aa24.64■■□□□ 1.54
MBD3-201ENST00000156825 GGT6Q6P531 493 aa24.6■■□□□ 1.53
MBD3-201ENST00000156825 ABCC8Q09428 1581 aa24.59■■□□□ 1.53
MBD3-201ENST00000156825 B4GALNT3Q6L9W6 998 aa24.59■■□□□ 1.53
MBD3-201ENST00000156825 FHAD1B1AJZ9 1412 aa24.58■■□□□ 1.52
MBD3-201ENST00000156825 NUDCQ9Y266 331 aa24.57■■□□□ 1.52
MBD3-201ENST00000156825 TDRD9Q8NDG6 1382 aaKnown RBP24.56■■□□□ 1.52
MBD3-201ENST00000156825 TRHP20396 242 aaPredicted RBP24.56■■□□□ 1.52
MBD3-201ENST00000156825 PKD2Q13563 968 aa24.55■■□□□ 1.52
MBD3-201ENST00000156825 MROH2BQ7Z745 1585 aa24.55■■□□□ 1.52
MBD3-201ENST00000156825 BECN1Q14457 450 aa24.54■■□□□ 1.52
MBD3-201ENST00000156825 CCDC88BA6NC98 1476 aa24.52■■□□□ 1.52
MBD3-201ENST00000156825 STK26Q9P289 416 aa24.52■■□□□ 1.52
MBD3-201ENST00000156825 SRPK2P78362 688 aaKnown RBP24.52■■□□□ 1.52
MBD3-201ENST00000156825 TMF1P82094 1093 aa24.52■■□□□ 1.52
MBD3-201ENST00000156825 HSPA5P11021 654 aaKnown RBP24.51■■□□□ 1.51
MBD3-201ENST00000156825 NCLP19338 710 aaKnown RBP24.51■■□□□ 1.51
MBD3-201ENST00000156825 TAOK2Q9UL54 1235 aa24.5■■□□□ 1.51
MBD3-201ENST00000156825 DDRGK1Q96HY6 314 aa24.47■■□□□ 1.51
MBD3-201ENST00000156825 PPP4R2Q9NY27 417 aa24.46■■□□□ 1.51
MBD3-201ENST00000156825 VPS8Q8N3P4 1428 aa24.43■■□□□ 1.5
MBD3-201ENST00000156825 SETD5Q9C0A6 1442 aa24.43■■□□□ 1.5
MBD3-201ENST00000156825 MORC1Q86VD1 984 aa24.4■■□□□ 1.5
MBD3-201ENST00000156825 KANK1Q14678 1352 aa24.38■■□□□ 1.49
MBD3-201ENST00000156825 ARHGAP35Q9NRY4 1499 aa24.37■■□□□ 1.49
MBD3-201ENST00000156825 MPHOSPH9Q99550 1183 aa24.36■■□□□ 1.49
MBD3-201ENST00000156825 GOLGA6L22H0YM25 854 aa24.35■■□□□ 1.49
MBD3-201ENST00000156825 RAB3GAP2Q9H2M9 1393 aa24.35■■□□□ 1.49
MBD3-201ENST00000156825 OS9Q13438 667 aaPredicted RBP24.33■■□□□ 1.49
MBD3-201ENST00000156825 CASC1Q6TDU7 716 aa24.33■■□□□ 1.49
MBD3-201ENST00000156825 NUP155O75694 1391 aa24.32■■□□□ 1.48
MBD3-201ENST00000156825 NUTM2DQ5VT03 806 aaPredicted RBP24.31■■□□□ 1.48
MBD3-201ENST00000156825 TRIM44Q96DX7 344 aaPredicted RBP24.3■■□□□ 1.48
MBD3-201ENST00000156825 HNRNPMP52272 730 aaKnown RBP eCLIP24.3■■□□□ 1.483e-6■■■■□ 22.1
MBD3-201ENST00000156825 NPHP1O15259 732 aa24.28■■□□□ 1.48
MBD3-201ENST00000156825 TIMELESSQ9UNS1 1208 aa24.28■■□□□ 1.48
MBD3-201ENST00000156825 APBB1O00213 710 aa24.26■■□□□ 1.47
MBD3-201ENST00000156825 TULP1O00294 542 aaPredicted RBP24.25■■□□□ 1.47
MBD3-201ENST00000156825 KIF3BO15066 747 aa24.25■■□□□ 1.47
MBD3-201ENST00000156825 EFCAB2Q5VUJ9 269 aa24.23■■□□□ 1.47
MBD3-201ENST00000156825 SPRYD3Q8NCJ5 442 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms