RNA–Protein interactions for RNA: ENSMUST00000185633.6

Xrn1-202, Transcript of 5'-3' exoribonuclease 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Xrn1, Length 10,256 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1-202ENSMUST00000185633 Ccdc88bQ4QRL3 1481 aa5.88□□□□□ -1.47
Xrn1-202ENSMUST00000185633 Ifnlr1Q8CGK5 535 aa5.88□□□□□ -1.47
Xrn1-202ENSMUST00000185633 Arhgef40Q3UPH7 1517 aa5.88□□□□□ -1.47
Xrn1-202ENSMUST00000185633 Mrc2Q64449 1479 aa5.88□□□□□ -1.47
Xrn1-202ENSMUST00000185633 DiexfQ8BTT6 772 aaKnown RBP5.88□□□□□ -1.47
Xrn1-202ENSMUST00000185633 Cux2P70298 1426 aa5.87□□□□□ -1.47
Xrn1-202ENSMUST00000185633 Lamc1P02468 1607 aaKnown RBP5.87□□□□□ -1.47
Xrn1-202ENSMUST00000185633 Kif15Q6P9L6 1387 aa5.86□□□□□ -1.47
Xrn1-202ENSMUST00000185633 Plb1Q3TTY0 1478 aa5.86□□□□□ -1.47
Xrn1-202ENSMUST00000185633 Zeb1Q64318 1117 aa5.85□□□□□ -1.47
Xrn1-202ENSMUST00000185633 Crocc2F6XLV1 1638 aa5.85□□□□□ -1.47
Xrn1-202ENSMUST00000185633 Arhgef12Q8R4H2 1543 aaKnown RBP5.85□□□□□ -1.47
Xrn1-202ENSMUST00000185633 Shroom4Q1W617 1475 aa5.84□□□□□ -1.47
Xrn1-202ENSMUST00000185633 Lrriq1Q0P5X1 1673 aa5.83□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Rsf1E9PWW9 1441 aaKnown RBP5.83□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Urb2E9Q7L1 1524 aaKnown RBP5.82□□□□□ -1.48
Xrn1-202ENSMUST00000185633 BlmO88700 1416 aa5.81□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Hecw1Q8K4P8 1604 aa5.81□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Tiam1Q60610 1591 aa5.81□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Lmtk2Q3TYD6 1471 aa5.81□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Chic1Q8CBW7 227 aa5.81□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Col17a1Q07563 1470 aa5.8□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Grin2bQ01097 1482 aa5.8□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Znf608Q56A10 1511 aa5.8□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Esf1Q3V1V3 845 aaKnown RBP5.8□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Ube2uB1AUC4 352 aa5.79□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Arhgef5E9Q7D5 1581 aa5.79□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Wdr7Q920I9 1489 aa5.78□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Rpap1Q80TE0 1409 aa5.78□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Zmym4A2A791 1549 aaKnown RBP5.78□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Rad54l2Q99NG0 1466 aa5.78□□□□□ -1.48
Xrn1-202ENSMUST00000185633 Tnnt3Q9QZ47 272 aa5.78□□□□□ -1.48
Xrn1-202ENSMUST00000185633 TonslQ6NZL6 1363 aa5.77□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Mroh1E0CZ22 1640 aa5.77□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Efcab5A0JP43 1406 aa5.77□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Fkbp15Q6P9Q6 1216 aaKnown RBP5.76□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Cux1P53564 1515 aa5.76□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Setd1aE9PYH6 1716 aa5.76□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Prex2Q3LAC4 1598 aa5.76□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Dhx29Q6PGC1 1365 aaKnown RBP5.75□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Ankrd26Q811D2 1581 aa5.75□□□□□ -1.49
Xrn1-202ENSMUST00000185633 NeflP08551 543 aa5.75□□□□□ -1.49
Xrn1-202ENSMUST00000185633 PtprkP35822 1457 aa5.74□□□□□ -1.49
Xrn1-202ENSMUST00000185633 NefmP08553 848 aa5.74□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Akap12Q9WTQ5 1684 aa5.74□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Mroh2bQ7M6Y6 1581 aa5.74□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Cep162Q6ZQ06 1403 aa5.74□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Eea1Q8BL66 1411 aa5.73□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Arhgap35Q91YM2 1499 aa5.73□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Mast1Q9R1L5 1570 aa5.73□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Rrbp1Q99PL5 1605 aaKnown RBP5.73□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Kiaa0556Q8C753 1610 aa5.73□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Samd9lQ69Z37 1561 aa5.72□□□□□ -1.49
Xrn1-202ENSMUST00000185633 Trpm1Q2TV84 1622 aa5.72□□□□□ -1.49
Xrn1-202ENSMUST00000185633 DroshaQ5HZJ0 1373 aaKnown RBP5.71□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Kiaa1551Q5DTW7 1521 aa5.71□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Rfx7F8VPJ6 1459 aa5.71□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Ankrd36D3Z4K0 1415 aa5.7□□□□□ -1.5
Xrn1-202ENSMUST00000185633 UacaQ8CGB3 1411 aa5.7□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Nup160Q9Z0W3 1402 aaKnown RBP5.7□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Pcf11G3X9Z4 1553 aa5.7□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Robo2Q7TPD3 1470 aa5.7□□□□□ -1.5
Xrn1-202ENSMUST00000185633 PtprtQ99M80 1454 aa5.69□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Fam208aQ69ZR9 1610 aaKnown RBP5.69□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Cdc42bpaQ3UU96 1719 aa5.69□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Kdm5aQ3UXZ9 1690 aa5.69□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Tubgcp6G5E8P0 1769 aa5.68□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Map3k4O08648 1597 aa5.68□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Myt1lP97500 1187 aa5.68□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Abca17E9PX95 1733 aa5.68□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Ncapd3Q6ZQK0 1506 aa5.67□□□□□ -1.5
Xrn1-202ENSMUST00000185633 CatipB9EKE5 520 aa5.67□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Rnf17Q99MV7 1640 aa5.67□□□□□ -1.5
Xrn1-202ENSMUST00000185633 PogzQ8BZH4 1409 aaKnown RBP5.67□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Eif4g3Q80XI3 1579 aaKnown RBP5.67□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Gab3Q8BSM5 595 aa5.66□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Trpm2Q91YD4 1506 aa5.66□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Disp1Q3TDN0 1521 aa5.66□□□□□ -1.5
Xrn1-202ENSMUST00000185633 SphkapQ6NSW3 1687 aa5.65□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Cdk11bP24788 784 aaKnown RBP5.65□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Gapvd1Q6PAR5 1458 aa5.65□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Acin1Q9JIX8 1338 aaKnown RBP5.65□□□□□ -1.5
Xrn1-202ENSMUST00000185633 Gm156Q58A37 223 aa5.64□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Arid3cA6PWV5 409 aa5.64□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Zcchc11B2RX14 1644 aaKnown RBP5.64□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Npm1Q61937 292 aaKnown RBP5.64□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Anp32bQ9EST5 272 aaKnown RBP5.64□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Pabpn1Q8CCS6 302 aaKnown RBP5.64□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Prdm2A2A7B5 1709 aaKnown RBP5.64□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Magi3Q9EQJ9 1476 aa5.64□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Tmem131lQ3U3D7 1597 aa5.63□□□□□ -1.51
Xrn1-202ENSMUST00000185633 PxdnQ3UQ28 1475 aa5.63□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Dot1lQ6XZL8 1540 aa5.63□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Dnmt1P13864 1620 aaKnown RBP5.63□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Npm2Q80W85 207 aa5.63□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Abca16E9PWJ7 1678 aa5.63□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Arap1Q4LDD4 1452 aa5.62□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Mapkbp1Q6NS57 1503 aa5.61□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Ncoa2Q61026 1462 aa5.61□□□□□ -1.51
Xrn1-202ENSMUST00000185633 Slc24a1Q91WD8 1130 aa5.61□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 118.5 ms