RNA–Protein interactions for RNA: ENSMUST00000106619.7

Ttc39a-203, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

TSL 1 (best) BASIC

Gene Ttc39a, Length 1,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-203ENSMUST00000106619 Rusc2Q80U22 1514 aa30.31■■■□□ 2.44
Ttc39a-203ENSMUST00000106619 Cc2d2bA0A286YDU8 1405 aa30.31■■■□□ 2.44
Ttc39a-203ENSMUST00000106619 Polr1aO35134 1717 aaKnown RBP30.27■■■□□ 2.44
Ttc39a-203ENSMUST00000106619 EprsQ8CGC7 1512 aaKnown RBP30.25■■■□□ 2.43
Ttc39a-203ENSMUST00000106619 Cux1P53564 1515 aa30.21■■■□□ 2.43
Ttc39a-203ENSMUST00000106619 Eea1Q8BL66 1411 aa30.21■■■□□ 2.43
Ttc39a-203ENSMUST00000106619 Ankrd26Q811D2 1581 aa30.2■■■□□ 2.43
Ttc39a-203ENSMUST00000106619 Rpap1Q80TE0 1409 aa30.19■■■□□ 2.42
Ttc39a-203ENSMUST00000106619 Adamts12Q811B3 1600 aa30.16■■■□□ 2.42
Ttc39a-203ENSMUST00000106619 Erich3F6QRE9 1637 aa30.15■■■□□ 2.42
Ttc39a-203ENSMUST00000106619 Setd5Q5XJV7 1441 aa30.14■■■□□ 2.41
Ttc39a-203ENSMUST00000106619 Fyco1Q8VDC1 1437 aa30.13■■■□□ 2.41
Ttc39a-203ENSMUST00000106619 WizO88286 1684 aaKnown RBP30.08■■■□□ 2.41
Ttc39a-203ENSMUST00000106619 TchhA0A0B4J1F9 1599 aa30.07■■■□□ 2.4
Ttc39a-203ENSMUST00000106619 CadpsQ80TJ1 1355 aa30.07■■■□□ 2.4
Ttc39a-203ENSMUST00000106619 Arap1Q4LDD4 1452 aa30.06■■■□□ 2.4
Ttc39a-203ENSMUST00000106619 Abca16E9PWJ7 1678 aa30.03■■■□□ 2.4
Ttc39a-203ENSMUST00000106619 Gm7298A0A0N4SVU1 1476 aa30.02■■■□□ 2.4
Ttc39a-203ENSMUST00000106619 Ehmt2Q9Z148 1263 aaKnown RBP30.02■■■□□ 2.4
Ttc39a-203ENSMUST00000106619 Abca5Q8K448 1642 aa30■■■□□ 2.39
Ttc39a-203ENSMUST00000106619 PxdnQ3UQ28 1475 aa30■■■□□ 2.39
Ttc39a-203ENSMUST00000106619 Lmo7E9PYF4 1699 aaKnown RBP29.97■■■□□ 2.39
Ttc39a-203ENSMUST00000106619 Arhgef5E9Q7D5 1581 aa29.96■■■□□ 2.39
Ttc39a-203ENSMUST00000106619 Soga1E1U8D0 1418 aa29.96■■■□□ 2.39
Ttc39a-203ENSMUST00000106619 Pcf11G3X9Z4 1553 aa29.93■■■□□ 2.38
Ttc39a-203ENSMUST00000106619 Abcc2Q8VI47 1543 aa29.91■■■□□ 2.38
Ttc39a-203ENSMUST00000106619 Ap3b1Q9Z1T1 1105 aa29.84■■■□□ 2.37
Ttc39a-203ENSMUST00000106619 Aebp1Q640N1 1128 aa29.81■■■□□ 2.36
Ttc39a-203ENSMUST00000106619 Fgd6Q69ZL1 1399 aa29.81■■■□□ 2.36
Ttc39a-203ENSMUST00000106619 Arhgap27A2AB59 869 aa29.8■■■□□ 2.36
Ttc39a-203ENSMUST00000106619 Map3k4O08648 1597 aa29.79■■■□□ 2.36
Ttc39a-203ENSMUST00000106619 Tiam1Q60610 1591 aa29.79■■■□□ 2.36
Ttc39a-203ENSMUST00000106619 CntlnA2AM05 1397 aa29.79■■■□□ 2.36
Ttc39a-203ENSMUST00000106619 BlmO88700 1416 aa29.78■■■□□ 2.36
Ttc39a-203ENSMUST00000106619 Dnmt1P13864 1620 aaKnown RBP29.76■■■□□ 2.35
Ttc39a-203ENSMUST00000106619 Shroom2A2ALU4 1481 aa29.75■■■□□ 2.35
Ttc39a-203ENSMUST00000106619 Naip1Q9QWK5 1403 aa29.74■■■□□ 2.35
Ttc39a-203ENSMUST00000106619 Peg3Q3URU2 1571 aa29.71■■■□□ 2.35
Ttc39a-203ENSMUST00000106619 Plekhg3Q4VAC9 1341 aa29.69■■■□□ 2.34
Ttc39a-203ENSMUST00000106619 Slx4Q6P1D7 1565 aa29.69■■■□□ 2.34
Ttc39a-203ENSMUST00000106619 WrnO09053 1401 aa29.69■■■□□ 2.34
Ttc39a-203ENSMUST00000106619 BC005561E9Q5E2 1589 aa29.66■■■□□ 2.34
Ttc39a-203ENSMUST00000106619 AknaQ80VW7 1404 aa29.6■■■□□ 2.33
Ttc39a-203ENSMUST00000106619 Neo1P97798 1493 aa29.6■■■□□ 2.33
Ttc39a-203ENSMUST00000106619 Kif27Q7M6Z4 1394 aa29.59■■■□□ 2.33
Ttc39a-203ENSMUST00000106619 Gm1043A0A140LJC2 1431 aa29.54■■■□□ 2.32
Ttc39a-203ENSMUST00000106619 Rapgef6Q5NCJ1 1609 aa29.48■■■□□ 2.31
Ttc39a-203ENSMUST00000106619 Abcc1O35379 1528 aa29.48■■■□□ 2.31
Ttc39a-203ENSMUST00000106619 Arhgef12Q8R4H2 1543 aaKnown RBP29.48■■■□□ 2.31
Ttc39a-203ENSMUST00000106619 Zcchc11B2RX14 1644 aaKnown RBP29.46■■■□□ 2.31
Ttc39a-203ENSMUST00000106619 UbtfP25976 765 aaKnown RBP29.45■■■□□ 2.31
Ttc39a-203ENSMUST00000106619 Jph4Q80WT0 628 aa29.44■■■□□ 2.3
Ttc39a-203ENSMUST00000106619 Gm14025A2AP89 1413 aa29.43■■■□□ 2.3
Ttc39a-203ENSMUST00000106619 Lmod2Q3UHZ5 550 aa29.42■■■□□ 2.3
Ttc39a-203ENSMUST00000106619 Rrbp1Q99PL5 1605 aaKnown RBP29.42■■■□□ 2.3
Ttc39a-203ENSMUST00000106619 Arhgap31A6X8Z5 1425 aa29.42■■■□□ 2.3
Ttc39a-203ENSMUST00000106619 Chd1P40201 1711 aa29.38■■■□□ 2.29
Ttc39a-203ENSMUST00000106619 Ccdc141E9Q8Q6 1531 aa29.37■■■□□ 2.29
Ttc39a-203ENSMUST00000106619 Pabpn1Q8CCS6 302 aaKnown RBP29.36■■■□□ 2.29
Ttc39a-203ENSMUST00000106619 Ncoa2Q61026 1462 aa29.36■■■□□ 2.29
Ttc39a-203ENSMUST00000106619 Arhgef11Q68FM7 1552 aa29.32■■■□□ 2.28
Ttc39a-203ENSMUST00000106619 Acin1Q9JIX8 1338 aaKnown RBP29.3■■■□□ 2.28
Ttc39a-203ENSMUST00000106619 Mug1P28665 1476 aa29.29■■■□□ 2.28
Ttc39a-203ENSMUST00000106619 Pelp1Q9DBD5 1123 aaKnown RBP29.29■■■□□ 2.28
Ttc39a-203ENSMUST00000106619 Lmtk2Q3TYD6 1471 aa29.29■■■□□ 2.28
Ttc39a-203ENSMUST00000106619 Ncoa3O09000 1398 aa29.28■■■□□ 2.28
Ttc39a-203ENSMUST00000106619 Mroh2aD3Z750 1679 aa29.26■■■□□ 2.27
Ttc39a-203ENSMUST00000106619 NexmifQ5DTT1 1515 aa29.25■■■□□ 2.27
Ttc39a-203ENSMUST00000106619 Magi1Q6RHR9 1471 aa29.23■■■□□ 2.27
Ttc39a-203ENSMUST00000106619 Kiaa1551Q5DTW7 1521 aa29.2■■■□□ 2.26
Ttc39a-203ENSMUST00000106619 Kdm5bQ80Y84 1544 aa29.2■■■□□ 2.26
Ttc39a-203ENSMUST00000106619 Dhx57Q6P5D3 1388 aaKnown RBP29.19■■■□□ 2.26
Ttc39a-203ENSMUST00000106619 Ythdc2B2RR83 1445 aaKnown RBP29.19■■■□□ 2.26
Ttc39a-203ENSMUST00000106619 Gapvd1Q6PAR5 1458 aa29.19■■■□□ 2.26
Ttc39a-203ENSMUST00000106619 Ncapd3Q6ZQK0 1506 aa29.18■■■□□ 2.26
Ttc39a-203ENSMUST00000106619 Ccnb3Q810T2 1396 aa29.17■■■□□ 2.26
Ttc39a-203ENSMUST00000106619 Fam163aQ8CAA5 168 aa29.16■■■□□ 2.26
Ttc39a-203ENSMUST00000106619 Gcc2Q8CHG3 1679 aa29.15■■■□□ 2.26
Ttc39a-203ENSMUST00000106619 Cdc42bpaQ3UU96 1719 aa29.15■■■□□ 2.26
Ttc39a-203ENSMUST00000106619 Fkbp15Q6P9Q6 1216 aaKnown RBP29.13■■■□□ 2.25
Ttc39a-203ENSMUST00000106619 Fancd2Q80V62 1450 aa29.12■■■□□ 2.25
Ttc39a-203ENSMUST00000106619 Mapkbp1Q6NS57 1503 aa29.11■■■□□ 2.25
Ttc39a-203ENSMUST00000106619 Mier1Q5UAK0 511 aa29.11■■■□□ 2.25
Ttc39a-203ENSMUST00000106619 3425401B19RikD3Z1D3 1412 aa29.1■■■□□ 2.25
Ttc39a-203ENSMUST00000106619 PtprtQ99M80 1454 aa29.09■■■□□ 2.25
Ttc39a-203ENSMUST00000106619 Cep170Q6A065 1588 aa29.08■■■□□ 2.25
Ttc39a-203ENSMUST00000106619 Prex2Q3LAC4 1598 aa29.07■■■□□ 2.24
Ttc39a-203ENSMUST00000106619 Cul7Q8VE73 1689 aa29.06■■■□□ 2.24
Ttc39a-203ENSMUST00000106619 NhsB1AV60 1647 aa29.06■■■□□ 2.24
Ttc39a-203ENSMUST00000106619 Kiaa1210E9Q0C6 1637 aa29.04■■■□□ 2.24
Ttc39a-203ENSMUST00000106619 Igf1rQ60751 1373 aa29■■■□□ 2.23
Ttc39a-203ENSMUST00000106619 Wdr7Q920I9 1489 aa28.98■■■□□ 2.23
Ttc39a-203ENSMUST00000106619 AI481877A2ALV5 1481 aa28.97■■■□□ 2.23
Ttc39a-203ENSMUST00000106619 Fam208aQ69ZR9 1610 aaKnown RBP28.94■■■□□ 2.22
Ttc39a-203ENSMUST00000106619 Rpgrip1Q9EPQ2 1331 aa28.94■■■□□ 2.22
Ttc39a-203ENSMUST00000106619 Adcy10Q8C0T9 1614 aa28.91■■■□□ 2.22
Ttc39a-203ENSMUST00000106619 A2mQ6GQT1 1474 aa28.91■■■□□ 2.22
Ttc39a-203ENSMUST00000106619 Arhgef40Q3UPH7 1517 aa28.89■■■□□ 2.22
Ttc39a-203ENSMUST00000106619 Mlh3A0A1Y7VMP7 1443 aa28.88■■■□□ 2.21
Ttc39a-203ENSMUST00000106619 Atp10dQ8K2X1 1416 aa28.87■■■□□ 2.21
Retrieved 100 of 22,080 RNA–protein pairs in 11.1 ms